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The OptIPuter and Its Applications Invited Talk  Cyberinfrastructure for Humanities, Arts, and Social Sciences  A Summer Institute SDSC  UCSD July 26, 2006 Dr. Larry Smarr Director, California Institute for Telecommunications and Information Technologies Harry E. Gruber Professor,  Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD
From “Supercomputer–Centric”  to “Supernetwork-Centric” Cyberinfrastructure Megabit/s Gigabit/s Terabit/s Network Data Source: Timothy Lance, President, NYSERNet 32x10Gb “Lambdas” 1 GFLOP Cray2 60 TFLOP Altix Bandwidth of NYSERNet  Research Network Backbones T1 Optical WAN Research Bandwidth  Has Grown Much Faster Than  Supercomputer Speed! Computing Speed (GFLOPS)
The OptIPuter Project – Creating a “SuperWeb”  for Data Intensive Researchers ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],NIH Biomedical Informatics NSF EarthScope and ORION Research Network
What is the  OptIPuter? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],See Nov 2003 Communications of the ACM  for Articles on OptIPuter Technologies www.optiputer.net
Dedicated Optical Channels Makes  High Performance Cyberinfrastructure Possible Parallel Lambdas are Driving Optical Networking  The Way Parallel Processors Drove 1990s Computing ( WDM) Source: Steve Wallach, Chiaro Networks “ Lambdas”
National Lambda Rail (NLR) and TeraGrid Provides  Cyberinfrastructure Backbone for U.S. Researchers NLR 4 x 10Gb Lambdas Initially Capable of 40 x 10Gb wavelengths at Buildout Links Two Dozen State and Regional Optical Networks DOE, NSF, & NASA Using NLR  San Francisco Pittsburgh Cleveland San Diego Los Angeles Portland Seattle Pensacola Baton Rouge Houston San Antonio Las Cruces / El Paso Phoenix New York City Washington, DC Raleigh Jacksonville Dallas Tulsa Atlanta Kansas City Denver Ogden/ Salt Lake City Boise Albuquerque UC-TeraGrid UIC/NW-Starlight Chicago International  Collaborators NSF’s TeraGrid Has 4 x 10Gb  Lambda Backbone
Creating a North American Superhighway  for High Performance Collaboration Next Step: Adding Mexico to  Canada’s CANARIE and the U.S. National Lambda Rail
OptIPuter Scalable Adaptive Graphics Environment (SAGE) Allows Integration of HD Streams OptIPortal–  Termination Device  for the OptIPuter Global Backplane
OptIPortal–  Termination Device for the OptIPuter Global Backplane ,[object Object],[object Object],[object Object],Source: Phil Papadopoulos SDSC, Calit2
The World’s Largest Tiled Display Wall— Calit2@UCI’s HIPerWall Zeiss Scanning Electron Microscope Center of Excellence in Calit2@UCI Albert Yee, PI Calit2@UCI Apple Tiled Display Wall Driven by 25 Dual-Processor G5s 50 Apple 30” Cinema Displays 200 Million Pixels of Viewing Real Estate! Falko Kuester and Steve Jenks, PIs Featured in  Apple Computer’s  “ Hot News” HDTV Digital Cameras Digital Cinema
3D Videophones Are Here!  The Personal Varrier Autostereo Display ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Source: Daniel Sandin, Thomas DeFanti, Jinghua Ge, Javier Girado, Robert Kooima, Tom Peterka—EVL, UIC
How Do You Get From Your Lab  to the National LambdaRail? www.ctwatch.org “ Research is being stalled by ‘information overload,’ Mr. Bement said, because data from digital instruments are piling up far faster than researchers can study. In particular, he said, campus networks need to be improved. High-speed data lines crossing the nation are the equivalent of six-lane superhighways, he said. But networks at colleges and universities are not so capable.  “Those massive conduits are reduced to two-lane roads at most college and university campuses,”  he said. Improving cyberinfrastructure, he said, “will transform the capabilities of campus-based scientists.” -- Arden Bement, the director of the National Science Foundation
To Build a Campus Dark Fiber Network— First, Find Out Where All the Campus Conduit Is!
UCSD Campus-Scale Routed OptIPuter with  Nodes for Storage, Computation and Visualization
The New Optical Core of the UCSD Campus-Scale Testbed: Evaluating Packet Routing versus Lambda Switching ,[object Object],[object Object],[object Object],[object Object],[object Object],Approximately 0.5 TBit/s Arrive at the “Optical” Center of Campus Switching will be a Hybrid Combination of:  Packet, Lambda, Circuit -- OOO and Packet Switches Already in Place Funded by NSF MRI Grant Lucent Glimmerglass Force10
OptIPuter@UCI is Up and Working Created 09-27-2005 by Garrett Hildebrand Modified 11-03-2005 by Jessica Yu 10 GE SPDS Catalyst 3750 in CSI ONS 15540 WDM at UCI campus MPOE (CPL) 10 GE DWDM Network Line Engineering Gateway Building,  Catalyst 3750 in 3 rd floor IDF MDF Catalyst 6500 w/ firewall, 1 st  floor closet Wave-2 : layer-2 GE. UCSD address space 137.110.247.210-222/28 Floor 2 Catalyst 6500 Floor 3 Catalyst 6500 Floor 4 Catalyst 6500 Wave-1 : UCSD address space 137.110.247.242-246 NACS-reserved for testing ESMF Catalyst 3750 in NACS Machine Room (Optiputer) Viz Lab Wave 1 1GE Wave 2 1GE Kim-Jitter Measurements  This Week! Calit2 Building UCInet HIPerWall Los Angeles 1 GE DWDM Network Line Tustin CENIC Calren POP UCSD  Optiputer Network
Calit2/SDSC Proposal to Create a UC Cyberinfrastructure  of OptIPuter “On-Ramps” to TeraGrid Resources UC San Francisco  UC San Diego  UC Riverside  UC Irvine  UC Davis  UC Berkeley UC Santa Cruz UC Santa Barbara  UC Los Angeles  UC Merced OptIPuter + CalREN-XD + TeraGrid = “OptiGrid” Source: Fran Berman, SDSC , Larry Smarr, Calit2 Creating a Critical Mass of End Users on a Secure LambdaGrid
OptIPuter Software Architecture--a Service-Oriented Architecture Integrating Lambdas Into the Grid GTP XCP UDT LambdaStream CEP RBUDP Globus XIO GRAM GSI Source: Andrew Chien, UCSD DVC Configuration Distributed Virtual Computer (DVC) API DVC Runtime Library Distributed Applications/ Web Services Telescience Vol-a-Tile SAGE JuxtaView Visualization  Data Services LambdaRAM DVC Services DVC Core Services DVC Job Scheduling DVC Communication Resource  Identify/Acquire Namespace Management Security Management High Speed Communication Storage Services IP Lambdas Discovery  and Control PIN/PDC RobuStore
PI Larry Smarr Announced January 17, 2006 $24.5M Over Seven Years
Marine Genome Sequencing Project Measuring the Genetic Diversity of Ocean Microbes CAMERA’s Sorcerer II Data  Will Double Number of Proteins  in GenBank!
Announced January 17, 2006
CAMERA’s Direct Access Core Architecture  Will Create Next Generation Metagenomics Server Traditional User Response Request Source: Phil Papadopoulos, SDSC, Calit2 + Web Services ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Flat File Server Farm W E B  PORTAL Dedicated Compute Farm (1000 CPUs) TeraGrid: Cyberinfrastructure Backplane (scheduled activities, e.g. all by all comparison) (10000s of CPUs)  Web (other service) Local  Cluster Local Environment Direct Access  Lambda Cnxns Data- Base Farm 10 GigE  Fabric
The Future Home of the Moore Foundation Funded Marine Microbial Ecology Metagenomics Complex First Implementation of  the CAMERA Complex Photo Courtesy Joe Keefe, Calit2 Major Buildout of Calit2 Server Room Underway
Calit2 and the Venter Institute Will Combine Telepresence with Remote Interactive Analysis Live Demonstration  of 21st Century  National-Scale  Team Science OptIPuter  Visualized  Data HDTV  Over  Lambda 25 Miles Venter Institute
UIC/UCSD 10GE  CAVEWave o n the National LambdaRail Emerging OptIPortal Sites   CAVEWave Connects Chicago to Seattle to San Diego…and Washington D.C. as of 4/1/06 and JCVI as of 5/15/06 NEW! NEW! SunLight CICESE UW JCVI MIT SIO UCSD SDSU UIC EVL UCI OptIPortals
[object Object],[object Object],[object Object],Borderless Collaboration Between Global University Research Centers at 10Gbps T   H   E  G   L   O   B   A   L  L   A   M   B   D   A  I   N   T   E   G   R   A   T   E   D  F   A   C   I   L   I   T   Y   Maxine Brown, Tom DeFanti, Co-Chairs www.igrid2005.org 100Gb of Bandwidth into the Calit2@UCSD Building More than 150Gb GLIF Transoceanic Bandwidth! 450 Attendees, 130 Participating Organizations 20 Countries Driving 49 Demonstrations 1- or 10- Gbps  Per Demo i Grid  2005
CineGrid   Leverages OptIPuter Cyberinfrastructure  to Enable Global “Extreme Media” Collaboration ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Source: Tom DeFanti, Laurin Herr
OptIPuter 4K Telepresence over IP at iGrid 2005  Demonstrated Technical Basis for CineGrid  Lays Technical Basis for Global Digital Cinema Sony  NTT  SGI New Calit2  Digital Cinema Auditorium Keio University  President Anzai UCSD  Chancellor Fox
Calit2 Works with CENIC to Provide  the California Optical Core for CineGrid  Calit2 UCI USC SFSU UCB ,[object Object],[object Object],[object Object],[object Object],CineGrid TM   will Link UCSD/Calit2 and USC School of Cinema TV with Keio University Research Institute for Digital Media and Content  Extended SoCal OptIPuter to USC School of Cinema-Television Calit2 UCSD Prototype of CineGrid TM Digital Archive of  Films Partnering with SFSU’s Institute for Next Generation Internet  Source: Laurin Herr,  Pacific Interface CineGrid TM  Project Leader
Calit2 and the Venter Institute Test CineGrid™  with HDTV Movie by John Carter Live Demonstration of 21st Century  Entertainment Delivery June 14, 2006 JCVI Sony HDTV JH-3 JC Venter Institute Rockville, MD Calit2 Auditorium StarLight Chicago
iGrid 2005 Kyoto Nijo Castle  Source:  Toppan  Printing Interactive VR Streamed Live from Tokyo to Calit2 Over  Dedicated GigE and  Projected at  4k Resolution
iGrid 2005 Cultural Heritage China and USA ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],www.internationalmediacentre.com/imc/index.html Data Acquisition from Laser Scanning Combined with Photogrammetry Enables the Construction of Unique Cultural Heritage Images from China.  3D Designs Of The Great Wall Are Combined With 3D Scans Of Physical Images And Satellite Imagery Stored On Servers In China And San Diego.  Source : Maxine Brown, EVL UIC
NSF’s Ocean Observatories Initiative (OOI) Envisions Global, Regional, and Coastal Scales LEO15 Inset Courtesy of Rutgers University, Institute of Marine and Coastal Sciences  $300M in President’s Budget for OOI
Coupling Regional and Coastal Ocean Observatories Using OptIPuter and Web/Grid Services LOOKING:  ( L aboratory for the  O cean  O bservatory  K nowledge  In tegration  G rid) www.neptune.washington.edu www.mbari.org/mars/ www.sccoos.org/ LOOKING Funded by NSF ITR- John Delaney, UWash, PI)
Using the OptIPuter to Couple Data Assimilation Models  to Remote Data Sources Including Biology Regional Ocean Modeling System (ROMS)  http://ourocean.jpl.nasa.gov/ NASA MODIS Mean Primary Productivity  for April 2001 in California Current System
Interactive Remote Data  and Visualization Services ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],NCSA Altix Data  and Vis Server Linking to OptIPuter An SDSC/NCSA Data Collaboration National Laboratory for Advanced Data Research
The Synergy of Digital Art and Science Visualization of JPL Simulation of Monterey Bay Source: Donna Cox, Robert Patterson, NCSA Funded by NSF LOOKING Grant 4k Resolution
First Remote Interactive High Definition Video  Exploration of Deep Sea Vents-Prototyping NEPTUNE Source John Delaney & Deborah Kelley, UWash Canadian-U.S. Collaboration
High Definition Still Frame  of Hydrothermal Vent Ecology 2.3 Km Deep  White Filamentous Bacteria on 'Pill Bug' Outer Carapace Source:  John Delaney and Research Channel,  U Washington 1 cm.

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The OptIPuter and Its Applications

  • 1. The OptIPuter and Its Applications Invited Talk Cyberinfrastructure for Humanities, Arts, and Social Sciences A Summer Institute SDSC UCSD July 26, 2006 Dr. Larry Smarr Director, California Institute for Telecommunications and Information Technologies Harry E. Gruber Professor, Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD
  • 2. From “Supercomputer–Centric” to “Supernetwork-Centric” Cyberinfrastructure Megabit/s Gigabit/s Terabit/s Network Data Source: Timothy Lance, President, NYSERNet 32x10Gb “Lambdas” 1 GFLOP Cray2 60 TFLOP Altix Bandwidth of NYSERNet Research Network Backbones T1 Optical WAN Research Bandwidth Has Grown Much Faster Than Supercomputer Speed! Computing Speed (GFLOPS)
  • 3.
  • 4.
  • 5. Dedicated Optical Channels Makes High Performance Cyberinfrastructure Possible Parallel Lambdas are Driving Optical Networking The Way Parallel Processors Drove 1990s Computing ( WDM) Source: Steve Wallach, Chiaro Networks “ Lambdas”
  • 6. National Lambda Rail (NLR) and TeraGrid Provides Cyberinfrastructure Backbone for U.S. Researchers NLR 4 x 10Gb Lambdas Initially Capable of 40 x 10Gb wavelengths at Buildout Links Two Dozen State and Regional Optical Networks DOE, NSF, & NASA Using NLR San Francisco Pittsburgh Cleveland San Diego Los Angeles Portland Seattle Pensacola Baton Rouge Houston San Antonio Las Cruces / El Paso Phoenix New York City Washington, DC Raleigh Jacksonville Dallas Tulsa Atlanta Kansas City Denver Ogden/ Salt Lake City Boise Albuquerque UC-TeraGrid UIC/NW-Starlight Chicago International Collaborators NSF’s TeraGrid Has 4 x 10Gb Lambda Backbone
  • 7. Creating a North American Superhighway for High Performance Collaboration Next Step: Adding Mexico to Canada’s CANARIE and the U.S. National Lambda Rail
  • 8. OptIPuter Scalable Adaptive Graphics Environment (SAGE) Allows Integration of HD Streams OptIPortal– Termination Device for the OptIPuter Global Backplane
  • 9.
  • 10. The World’s Largest Tiled Display Wall— Calit2@UCI’s HIPerWall Zeiss Scanning Electron Microscope Center of Excellence in Calit2@UCI Albert Yee, PI Calit2@UCI Apple Tiled Display Wall Driven by 25 Dual-Processor G5s 50 Apple 30” Cinema Displays 200 Million Pixels of Viewing Real Estate! Falko Kuester and Steve Jenks, PIs Featured in Apple Computer’s “ Hot News” HDTV Digital Cameras Digital Cinema
  • 11.
  • 12. How Do You Get From Your Lab to the National LambdaRail? www.ctwatch.org “ Research is being stalled by ‘information overload,’ Mr. Bement said, because data from digital instruments are piling up far faster than researchers can study. In particular, he said, campus networks need to be improved. High-speed data lines crossing the nation are the equivalent of six-lane superhighways, he said. But networks at colleges and universities are not so capable. “Those massive conduits are reduced to two-lane roads at most college and university campuses,” he said. Improving cyberinfrastructure, he said, “will transform the capabilities of campus-based scientists.” -- Arden Bement, the director of the National Science Foundation
  • 13. To Build a Campus Dark Fiber Network— First, Find Out Where All the Campus Conduit Is!
  • 14. UCSD Campus-Scale Routed OptIPuter with Nodes for Storage, Computation and Visualization
  • 15.
  • 16. OptIPuter@UCI is Up and Working Created 09-27-2005 by Garrett Hildebrand Modified 11-03-2005 by Jessica Yu 10 GE SPDS Catalyst 3750 in CSI ONS 15540 WDM at UCI campus MPOE (CPL) 10 GE DWDM Network Line Engineering Gateway Building, Catalyst 3750 in 3 rd floor IDF MDF Catalyst 6500 w/ firewall, 1 st floor closet Wave-2 : layer-2 GE. UCSD address space 137.110.247.210-222/28 Floor 2 Catalyst 6500 Floor 3 Catalyst 6500 Floor 4 Catalyst 6500 Wave-1 : UCSD address space 137.110.247.242-246 NACS-reserved for testing ESMF Catalyst 3750 in NACS Machine Room (Optiputer) Viz Lab Wave 1 1GE Wave 2 1GE Kim-Jitter Measurements This Week! Calit2 Building UCInet HIPerWall Los Angeles 1 GE DWDM Network Line Tustin CENIC Calren POP UCSD Optiputer Network
  • 17. Calit2/SDSC Proposal to Create a UC Cyberinfrastructure of OptIPuter “On-Ramps” to TeraGrid Resources UC San Francisco UC San Diego UC Riverside UC Irvine UC Davis UC Berkeley UC Santa Cruz UC Santa Barbara UC Los Angeles UC Merced OptIPuter + CalREN-XD + TeraGrid = “OptiGrid” Source: Fran Berman, SDSC , Larry Smarr, Calit2 Creating a Critical Mass of End Users on a Secure LambdaGrid
  • 18. OptIPuter Software Architecture--a Service-Oriented Architecture Integrating Lambdas Into the Grid GTP XCP UDT LambdaStream CEP RBUDP Globus XIO GRAM GSI Source: Andrew Chien, UCSD DVC Configuration Distributed Virtual Computer (DVC) API DVC Runtime Library Distributed Applications/ Web Services Telescience Vol-a-Tile SAGE JuxtaView Visualization Data Services LambdaRAM DVC Services DVC Core Services DVC Job Scheduling DVC Communication Resource Identify/Acquire Namespace Management Security Management High Speed Communication Storage Services IP Lambdas Discovery and Control PIN/PDC RobuStore
  • 19. PI Larry Smarr Announced January 17, 2006 $24.5M Over Seven Years
  • 20. Marine Genome Sequencing Project Measuring the Genetic Diversity of Ocean Microbes CAMERA’s Sorcerer II Data Will Double Number of Proteins in GenBank!
  • 22.
  • 23. The Future Home of the Moore Foundation Funded Marine Microbial Ecology Metagenomics Complex First Implementation of the CAMERA Complex Photo Courtesy Joe Keefe, Calit2 Major Buildout of Calit2 Server Room Underway
  • 24. Calit2 and the Venter Institute Will Combine Telepresence with Remote Interactive Analysis Live Demonstration of 21st Century National-Scale Team Science OptIPuter Visualized Data HDTV Over Lambda 25 Miles Venter Institute
  • 25. UIC/UCSD 10GE CAVEWave o n the National LambdaRail Emerging OptIPortal Sites CAVEWave Connects Chicago to Seattle to San Diego…and Washington D.C. as of 4/1/06 and JCVI as of 5/15/06 NEW! NEW! SunLight CICESE UW JCVI MIT SIO UCSD SDSU UIC EVL UCI OptIPortals
  • 26.
  • 27.
  • 28. OptIPuter 4K Telepresence over IP at iGrid 2005 Demonstrated Technical Basis for CineGrid  Lays Technical Basis for Global Digital Cinema Sony NTT SGI New Calit2 Digital Cinema Auditorium Keio University President Anzai UCSD Chancellor Fox
  • 29.
  • 30. Calit2 and the Venter Institute Test CineGrid™ with HDTV Movie by John Carter Live Demonstration of 21st Century Entertainment Delivery June 14, 2006 JCVI Sony HDTV JH-3 JC Venter Institute Rockville, MD Calit2 Auditorium StarLight Chicago
  • 31. iGrid 2005 Kyoto Nijo Castle Source: Toppan Printing Interactive VR Streamed Live from Tokyo to Calit2 Over Dedicated GigE and Projected at 4k Resolution
  • 32.
  • 33. NSF’s Ocean Observatories Initiative (OOI) Envisions Global, Regional, and Coastal Scales LEO15 Inset Courtesy of Rutgers University, Institute of Marine and Coastal Sciences $300M in President’s Budget for OOI
  • 34. Coupling Regional and Coastal Ocean Observatories Using OptIPuter and Web/Grid Services LOOKING: ( L aboratory for the O cean O bservatory K nowledge In tegration G rid) www.neptune.washington.edu www.mbari.org/mars/ www.sccoos.org/ LOOKING Funded by NSF ITR- John Delaney, UWash, PI)
  • 35. Using the OptIPuter to Couple Data Assimilation Models to Remote Data Sources Including Biology Regional Ocean Modeling System (ROMS) http://ourocean.jpl.nasa.gov/ NASA MODIS Mean Primary Productivity for April 2001 in California Current System
  • 36.
  • 37. The Synergy of Digital Art and Science Visualization of JPL Simulation of Monterey Bay Source: Donna Cox, Robert Patterson, NCSA Funded by NSF LOOKING Grant 4k Resolution
  • 38. First Remote Interactive High Definition Video Exploration of Deep Sea Vents-Prototyping NEPTUNE Source John Delaney & Deborah Kelley, UWash Canadian-U.S. Collaboration
  • 39. High Definition Still Frame of Hydrothermal Vent Ecology 2.3 Km Deep White Filamentous Bacteria on 'Pill Bug' Outer Carapace Source: John Delaney and Research Channel, U Washington 1 cm.