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UKOLN is supported  by: Acting as Advocate? Seven steps for libraries in the data decade  Dr Liz Lyon,  Director, UKOLN, University of Bath, UK Associate Director, UK Digital Curation Centre IATUL Conference, Purdue University, June 2010 . This work is licensed under a Creative Commons Licence Attribution-ShareAlike 2.0
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],http://www.ukoln.ac.uk/ukoln/staff/e.j.lyon/publications.html#november-2009 ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
data  s c a l e Human Genome printed   http://www.flickr.com/photos/johnjobby/2252981353/sizes/l/ Human Genome printed  http://www.flickr.com/photos/johnjobby/2252981353/sizes/l/
“ Data sets are becoming the new instruments of science”
$1000 genome in <15 minutes ....by 2013?
...data logistic challenges.... ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],...cloud services
Clients in the cloud
Library Actions ,[object Object]
Workflows, Models, Tools  Sage Bionetworks genomics Workflow
Reference Linking Research Outputs User registration data; Instrument allocation data etc. Comments, annotations, ratings etc. Risk assessment data; other sample data Analyse Derived  Data Research Concept  and/or  Experiment Design  Acquire Sample Peer-review Proposal  Conduct Experiment Generate, Create,  & Collect Raw Data  Process Raw Data into Derived Data Interpret & Analyse  Results Data Archive, Preservation & Curation IPR, Embargo & Access Control Validate, Reuse & Repurpose Data Publish  Research  Results Data Derived Data Processed Data Raw, Correction & Calibration  Data Papers, articles, presentations, reports  An Idealised Scientific Research Data Lifecycle Model Documentation, Metadata & Storage  (Reference, Provenance, Context, Calibration etc.) Start Project Write Proposal (include DMP) Scholarly Knowledge Write Usage Reports  Publication Database Research Activity Research Admin Activity Archive Activity Information Flow KEY Prepare Supplementary Data Prepare Manuscript Peer Review Research Discover & Access Appraisal & Quality Control Programs (generate customised software) Publication Activity
State-of-the-Art Report :  Models & Tools  (Alex Ball, June 2010) ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Library Actions ,[object Object],[object Object]
Data Sustainability….
Benefits Taxonomy: Summary Keeping Research Data Safe2 Report: April 2010 Dimension 1 Direct Indirect (costs avoided) Dimension 2 Near-term Long-term Dimension 3 Private Public
Library Actions ,[object Object],[object Object],[object Object]
Ethics, Privacy, Culture “ You have zero privacy anyway. Get over it” Scott McNealy, CEO Sun Microsystems, 1999
Post-genome decade Human genomes: >24  published & almost 200 unpublished
“ P4 medicine : Predictive, Personalised, Preventive, Participatory.” Leroy Hood –  Institute for Systems Biology ,[object Object],Image from Scientific American
P4 medicine ,[object Object],[object Object],[object Object],[object Object],[object Object],Genome scale network biology Genomic data as a commodity
They have shared their data….
Share  my  data?
“ While many researchers are positive about sharing data in principle, they are almost universally reluctant in practice. ..... using these data to publish results before anyone else is the primary way of gaining prestige in nearly all disciplines.” INCREMENTAL Project
[object Object],[object Object],[object Object],[object Object],[object Object],Stephen Friend
Participatory medicine : share data & empower the patient... Sage Congress  San Francisco April 2010
Library Actions ,[object Object],[object Object],[object Object],[object Object]
Library Actions ,[object Object],[object Object],[object Object],[object Object],[object Object]
Professional Scientists   Enthusiastic amateurs Training   Citizen scientist Standards and ethics   Local : natural history, environ. Peer-review    Global : astronomy Organisational support   Self-supporting
 
Citizen Science :  validated in the professional press
Working  with  science professionals
Library Actions ,[object Object]
Data Publication and Attribution http://www.flickr.com/photos/digitalfemme57/3271063366 /
Calls for action, new metrics
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Macro Micro / Nano Attribution granularity What are we citing?
How to cite large-scale predictive network models? ,[object Object],[object Object],[object Object],[object Object],[object Object]
Library Actions ,[object Object],[object Object]
Take homes... ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],...Acting as Advocate
Chicago Mart Plaza, 6-8 December 2010 Thank you…

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Acting as Advocate? Seven steps for libraries in the data decade

  • 1. UKOLN is supported by: Acting as Advocate? Seven steps for libraries in the data decade Dr Liz Lyon, Director, UKOLN, University of Bath, UK Associate Director, UK Digital Curation Centre IATUL Conference, Purdue University, June 2010 . This work is licensed under a Creative Commons Licence Attribution-ShareAlike 2.0
  • 2.
  • 3. data s c a l e Human Genome printed http://www.flickr.com/photos/johnjobby/2252981353/sizes/l/ Human Genome printed http://www.flickr.com/photos/johnjobby/2252981353/sizes/l/
  • 4. “ Data sets are becoming the new instruments of science”
  • 5. $1000 genome in <15 minutes ....by 2013?
  • 6.
  • 8.
  • 9. Workflows, Models, Tools Sage Bionetworks genomics Workflow
  • 10. Reference Linking Research Outputs User registration data; Instrument allocation data etc. Comments, annotations, ratings etc. Risk assessment data; other sample data Analyse Derived Data Research Concept and/or Experiment Design Acquire Sample Peer-review Proposal Conduct Experiment Generate, Create, & Collect Raw Data Process Raw Data into Derived Data Interpret & Analyse Results Data Archive, Preservation & Curation IPR, Embargo & Access Control Validate, Reuse & Repurpose Data Publish Research Results Data Derived Data Processed Data Raw, Correction & Calibration Data Papers, articles, presentations, reports An Idealised Scientific Research Data Lifecycle Model Documentation, Metadata & Storage (Reference, Provenance, Context, Calibration etc.) Start Project Write Proposal (include DMP) Scholarly Knowledge Write Usage Reports Publication Database Research Activity Research Admin Activity Archive Activity Information Flow KEY Prepare Supplementary Data Prepare Manuscript Peer Review Research Discover & Access Appraisal & Quality Control Programs (generate customised software) Publication Activity
  • 11.
  • 12.
  • 14. Benefits Taxonomy: Summary Keeping Research Data Safe2 Report: April 2010 Dimension 1 Direct Indirect (costs avoided) Dimension 2 Near-term Long-term Dimension 3 Private Public
  • 15.
  • 16. Ethics, Privacy, Culture “ You have zero privacy anyway. Get over it” Scott McNealy, CEO Sun Microsystems, 1999
  • 17. Post-genome decade Human genomes: >24 published & almost 200 unpublished
  • 18.
  • 19.
  • 20. They have shared their data….
  • 21. Share my data?
  • 22. “ While many researchers are positive about sharing data in principle, they are almost universally reluctant in practice. ..... using these data to publish results before anyone else is the primary way of gaining prestige in nearly all disciplines.” INCREMENTAL Project
  • 23.
  • 24. Participatory medicine : share data & empower the patient... Sage Congress San Francisco April 2010
  • 25.
  • 26.
  • 27. Professional Scientists Enthusiastic amateurs Training Citizen scientist Standards and ethics Local : natural history, environ. Peer-review Global : astronomy Organisational support Self-supporting
  • 28.  
  • 29. Citizen Science : validated in the professional press
  • 30. Working with science professionals
  • 31.
  • 32. Data Publication and Attribution http://www.flickr.com/photos/digitalfemme57/3271063366 /
  • 33. Calls for action, new metrics
  • 34.
  • 35.
  • 36.
  • 37.
  • 38. Chicago Mart Plaza, 6-8 December 2010 Thank you…

Notas del editor

  1. The I2S2 project aims to understand and identify the requirements for a data-driven research infrastructure in the Structural Sciences. The work is focused on the exemplar domain of Chemistry, but with a view towards inter-disciplinary application. This Idealised Scientific Research Data Lifecycle Model produced by the I2S2 project seeks to extend and adapt from a “researcher perspective”, the Keeping Research Data Safe (KRDS) Activity Model. It adapts KRDS from an archive-centric to a researcher-centric view by: Defining and emphasising more of the activities in the research (KRDS “Pre-Archive” ) phase where research data is created; Adding a “Publication” set of activities; Concatenating the KRDS “Archive” phase activities in the centre of the model for simplification and presentational purposes; Adding some specific local research administration activities. In addition for the purposes of the project, it adds some selective detail of information flows and information objects between the activities. Note this is an idealised model and several activities such as peer review or conduct experiment may have multiple instances or repetitions. It also represents a project view as of June 2010 and may be subject to further changes.