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MR
IMAGING OF BRAIN
Muhammad Bin Zulfiqar
PGR II SIMS/SHL
New Radiology Department
Basics of MR
• MR sequences
• MR signal characteristic
MRI----conventional sequences
• SE sequence ( spin echo )
– T1-weighted,T1-WI
TR: 200-800ms TE:15-30ms
– T2-weighted,T2-WI
TR:1500-2000ms TE:60-150ms
– Proton Density,N(H) )
TR:1500-2500ms TE:15-30ms

• IR sequence ( inversion recovery sequence )
TR ( short ) TE ( short ) TI ( short )
MR signal characteristics
• SE sequences :
– T1-WI: highest signal on fat tissue ,better for showing
anatomical structures
– T2-WI: highest signal in liquid, better for detecting
lesions
– N ( H ) Density(H): for characteristics of lesions

• GRE sequence : flip angle , fast scan
• IR sequence : separation between of fat and
liquid
MR signal characteristics

T2WI

T1WI
MR signal characteristics

Fat supression

Liquid supression
THREE DIMENSIONAL
BRAIN ANATOMY
5

3

Post Contrast sagittal T1 Weighted
M.R.I.

2

Section at the level of Foramen
Magnum

1

Answers
4

1. Cisterna Magna
2. Cervical Cord
3. Nasopharynx

Fig. 1.1 Post Contrast Axial MR Image of the brain

4. Mandible
5. Maxillary Sinus
Post Contrast sagittal T1 Wtd
M.R.I.
Section at the level of medulla
6

Answers
7

Fig. 1.2 Post Contrast Axial MR Image of the brain

6. Medulla
7. Sigmoid Sinus
14
13
12
Post Contrast sagittal T1 Wtd
M.R.I.

11
17

10
16

15

Section at the level of Pons

Answers

9

13. Internal Carotid
Artery
14. Cavernous Sinus

10. IV Ventricle
Fig. 1.3 Post Contrast Axial MR Image of the brain

8. Cerebellar
Hemisphere
9. Vermis

8

15. Middle Cerebellar
Peduncle

11. Pons
12. Basilar Artery

16. Internal Auditory
Canal
17. Temporal Lobe
20

22

19
18
21

Post Contrast sagittal T1 Wtd
M.R.I.
Section at the level of Mid Brain

Answers
18. Aqueduct of Sylvius
19. Midbrain
20. Orbits
Fig. 1.4 Post Contrast Axial MR Image of the brain

21. Posterior Cerebral Artery
22. Middle Cerebral Artery
27
25

24
Post Contrast sagittal T1 Wtd
M.R.I.
Section at the level of the
III Ventricle

Answers
23
26

23. Occipital Lobe
24. III Ventricle
25. Frontal Lobe

Fig. 1.5 Post Contrast Axial MR Image of the brain

26. Temporal Lobe
27. Sylvian Fissure
38
37
32
36

31

35

Post Contrast sagittal T1 Wtd
M.R.I.

30

Section at the level of Thalamus
29

Answers

34

28. Superior Sagittal Sinus
29. Occipital Lobe

33
28

33. Thalamus
34. Temporal Lobe

30. Choroid Plexus within the

35. Internal Capsule

occipital horn

Fig. 1.6 Post Contrast Axial MR Image of the brain

36. Putamen

31. Internal Cerebral Vein

37. Caudate Nucleus

32. Frontal Horn

38. Frontal Lobe
41

40
Post Contrast sagittal T1 Wtd
M.R.I.

39

Section at the level of Corpus
Callosum

Answers
39. Splenium of corpus callosum
40. Choroid plexus within the
Fig. 1.7 Post Contrast Axial MR Image of the brain

body of lateral ventricle
41. Genu of corpus callosum
44

43
Post Contrast sagittal T1 Wtd
M.R.I.

42

Section at the level of Body of
Corpus Callosum

Answers
42. Parietal Lobe
Fig. 1.8 Post Contrast Axial MR Image of the brain

43. Body of the Corpus Callosum
44. Frontal Lobe
46

Post Contrast sagittal T1 Wtd
M.R.I.
Section above the Corpus Callosum
45

Answers
45. Parietal Lobe
46. Frontal Lobe
Fig. 1.9 Post Contrast Axial MR Image of the brain
Normal anatomical structure of
head on MRI
T2WI
T1WI
Flair sequence
T2WI(coronal section )
T1WI ( sagittal section )

Corpus callosum; optic chiasm; pituitary gland; medulla oblongata
MRI diagnosis of brain vascular
diseases
• Intra cerebral Hemorrhage
• Cerebral Infarction
• Intracranial Aneurysm
Brain bleed (hemorrhage)
• Causes : high blood pressure,
vascular malformation and tumor
• Stage : acute, sub acute, chronic
MRI appearances of hemorrhage at
different stage
• Acute hemorrhage

MRI - iso-intensity on T1WI, slightly low or low
intensity on T2WI( ideally MR was poor than CT for
Acute hemorrhage ).

• Sub acute hemorrhage

MRI - iso- or high signal intensity on T1WI, iso- or
slightly high signal intensity on T2WI.

• Chronic hemorrhage
MRI - high signal intensity both on T1WI/T2WI.
acute/subacute hemorrhage
acute

subacute

T2WI

T1WI
Chronic intracranial hemorrhage
MRI diagnosis of cerebral infarction
MR appearances of cerebral
infarction
• High signal intensity at Acute , subacute and
chronic stage on T2WI because of increment of
fluid at infarction.
• Iso-intensity at acute stage , iso- or slightly low
intensity at subacute stage, low intensity at
chronic stage on T1WI.
• Flair and DWI sequences are more sensitive for
detecting acute infarction.
MR&CT appearances of acute
cerebral infarction
T2WI

MR:44396

T1WI

Flair
MR&CT appearances of acute cerebral
infarction

MR:44396

T2WI

T1WI

Flair
Acute infarction
Acute
infarction
Acute infarction
DWI
Subacute/chronic infarction—T2WI
T2WI--Coronal
Chronic infarction at brain stem and
cerebellum—T2WI
Chronic infarction at brain stem and
cerebellum—T1WI
MRI diagnosis of head
trauma
The types of head trauma





Skull fracture
traumatic cerebral swelling
brain contusions
Intracranial bleed of trauma
–
–
–
–

Epidural hematoma
Subdural hematoma
Subarachnoid hemorrhage
Intracerebral hematoma
MR diagnosis of cranial trauma
Epidural hematoma :

‫ ٭‬direct

violence on skull

‫٭‬skull fracture and deformation
‫٭‬direct laceration or tearing of meningeal arteries

‫ ٭‬local hematoma ,not across cranial suture
‫٭‬shape of duple convex mirror
MR FEATURES
‫ ٭‬shape of hematoma is biconvex
‫ ٭‬signal intensity of hematoma varies greatly depending
on times.
‫ ٭‬at acute stage ( 0~2 days ), iso-intensity on
T1WI , low intensity on T2WI.
‫٭‬at subacute stage ( 3~14 days ), becoming high
signal intensity from rim to center on T1WI, still low
signal intensity at 6~8 days and high signal intensity
after 8 day on T2WI.
‫ ٭‬at chronic stage (14 days later) , high signal intensity on
both T1WI and T2WI for quite long times (may be
several months)
Subacute hematoma at
left frontal lobe
Subacute hematoma at
left frontal lobe
Subdural hematoma
‫٭‬Location: supratentorial convexity.
‫ ٭‬Caused by stretching and tearing of bridging veins.
‫ ٭‬Hematoma is located between dura mater and
arachnoid. Often quite large extent , across cranial
suture.
‫ ٭‬MR appearances : shape of hematoma semilunar ,
signal changes of hematoma similar to epidural
hematoma at different stages.
Subacute Subdural Hematoma

Axial T1-weighted magnetic resonance imaging
demonstrates bilateral subacute subdural hematomas with T2-weighted magnetic resonance imaging in a
increased signal intensity. Areas of intermediate intensity patient with subdural hematoma shows blood
products of differing ages.
represent more acute hemorrhage into the subacute
collections.
Subacute subdural hematoma at left
frontal-temporal area
Subacute subdural hematoma at left
frontal-temporal area
MR Features of brain contusion
‫ ٭‬Often

involve the temporal and frontal lobe.
• Temporal lobe lesions tend to lie just above the petrous
bone or posterior to the greater sphenoid wing.
• Frontal lobe lesions occur just above the cribriform plate,
orbit, planum sphnoidale, and lesser sphenoid wing.
MR appearances
‫ ٭‬MR is more sensitive than CT to find small contusion
because of easy to find edema caused by contusion.

‫٭‬hemorrhagic foci appear petechia or multiple confluent
regions with high signal intensity.

‫ ٭‬easy to find contusion at brain stem.
Contusion and epidural hemorrhage at
both temporal lobe and frontal lobe
Contusion and epidural hemorrhage at
both temporal lobe and frontal lobe
Multiple contusions at both sides of
frontal and temporal lobes
Multiple contusions at both sides of
frontal and temporal lobes
INTRACRANIAL TUMORS
‫ ٭‬primary (80%) :originating

from cranial bone,

cranial meninges, brain tissues,
vessels, cranial nerves, pituitary
gland, etc.
glioma(50%) , meningioma(14%) , pituitary
tumor (11%) , acoustic neuroma(7%)

‫٭‬secondary (20%) : metastasis , involved by
from near structures.

tumor
The types of intracranial tumors
• Intraaxial brain tumors :
1.glioma( astrocytoma and oligodendroglioma)
2.ependymoma
3.medulloblastoma
4.hemangioblastoma
5.papilloma choroideum
6.metastases
The types of intracranial tumors
• Extraaxial brain tumors
1.meningioma
2.craniopharyngioma
3.pituitary tumor
4.nerve sheath tumors-acoustic
schwannoma
5.epidermorid cyst, dermoid cyst and
hamartomas
CT and MRI Signs for diagnosis
of intracranial tumors
Direct signs

、
1. tumor or occupying lesion.
2. abnormal density or signal.
3. enhancement in different
degree on enhanced scan.
Indirect signs
1. shift of near structures
2. edema in brain tissue near tumor
3. Intratumoral bleed
4. Intratumoral calcification
5. bone changes
Astrocytoma
lower grading of astrocytoma , grading
I or II .
• Often in adult (20~40
years ) -- more occult in
cerebral
hemisphere , grading
II , solid
• child– less seen , more in
cerebellum , grading I, cyst
Astrocytoma
MR :
Isointensity on T1WI , unclear border ,
high or slightly high signal intensity on T2WI
no or slight occupying effect , no or slight
enhancement.
Grade I Astrocytoma

T1WI

T2WI
Grade II astrocytoma

T2W
MR:39547

Gd+

Gd+
Astrocytoma

high grading ( grading III or IV)
• Fast growing
• Occur in any age
Imaging appearances of high
grading astrocytoma
• Obvious occupying effects ,infiltrating growing
with unclear margin , growing across lobe and
hemisphere.
• Necrosis, cyst , bleed.
• Obvious brain edema around tumor.
• Obvious uneven or ring-like enhancement.
Grade IV astrocytoma

T2W

MR:39985

T1W

Gd+
Grade IV

astrocytoma

T2W

MR:39985

Gd+

T2W

Gd+
Grading IV astrocytoma

MR : 53847
Brain metastasis
• Old age
• Single or multiple
• Multiple appearances on CT or MR, but
often shown in nodule
• Heterogeneous density or signal, central
necrosis with lower density or signal on
T1WI.
• Ring-like or even enhancement
• Obviously finger-like peritumoral edema
Multiple
metastases
Metastasis from lung cancer
uncontrast

contrast
Metastasis from lung cancer
uncontrast

contrast
Imaging of meningioma
• Round or hemishere mass occur mostly in convexity of
brain , especially sagittal sinus.
• Mass with clear margin which was encysted with cerebral
spinal fluid and/or vessels.
• Iso- or slightly high density on plain CT and low signal on
T1WI, iso- or slightly high signal on T2WI, which was
enhanced obviously and evenly.
• A broad thickened dural-based margin which was called
“tail sign” .
• Edema may be not or obvious.
• Local bone changes including destruction, thin or
thickness.
Right parietal meningioma

Contrast T1WI

Plain T1WI
T2WI AND
contrast T1WI
Meningioma

T2WI
T1WI
Gd-T1W
Acoustic schwannoma
• Benign tumor, occur mostly at middle age people,
approximately 7﹪~8﹪ of all primary intracranial neoplasms.
• Ovoid or tubular tumors may occur in the internal auditory canal
and cerebellopontine angle cistern .
• Tumor may be part of solid and cystic .
• On Plain CT, solid part of tumor was iso-density ,and cystic part
was low density.
• Iso-intensity or low signal intensity were seen in solid or cystic
part of tumor on T1WI, but high or very high signal intensity on
T2WI,.
• Obvious enhancement was seen on solid tumor.
• Enlargement of internal auditory canal.
Left acoustic
schwannoma
Left acoustic schwannoma

T2WI

T1WI

Contrast T1WI
Left acoustic
schwannoma
Mr imaging of brain

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Mr imaging of brain

  • 1. MR IMAGING OF BRAIN Muhammad Bin Zulfiqar PGR II SIMS/SHL New Radiology Department
  • 2. Basics of MR • MR sequences • MR signal characteristic
  • 3. MRI----conventional sequences • SE sequence ( spin echo ) – T1-weighted,T1-WI TR: 200-800ms TE:15-30ms – T2-weighted,T2-WI TR:1500-2000ms TE:60-150ms – Proton Density,N(H) ) TR:1500-2500ms TE:15-30ms • IR sequence ( inversion recovery sequence ) TR ( short ) TE ( short ) TI ( short )
  • 4. MR signal characteristics • SE sequences : – T1-WI: highest signal on fat tissue ,better for showing anatomical structures – T2-WI: highest signal in liquid, better for detecting lesions – N ( H ) Density(H): for characteristics of lesions • GRE sequence : flip angle , fast scan • IR sequence : separation between of fat and liquid
  • 6. MR signal characteristics Fat supression Liquid supression
  • 8. 5 3 Post Contrast sagittal T1 Weighted M.R.I. 2 Section at the level of Foramen Magnum 1 Answers 4 1. Cisterna Magna 2. Cervical Cord 3. Nasopharynx Fig. 1.1 Post Contrast Axial MR Image of the brain 4. Mandible 5. Maxillary Sinus
  • 9. Post Contrast sagittal T1 Wtd M.R.I. Section at the level of medulla 6 Answers 7 Fig. 1.2 Post Contrast Axial MR Image of the brain 6. Medulla 7. Sigmoid Sinus
  • 10. 14 13 12 Post Contrast sagittal T1 Wtd M.R.I. 11 17 10 16 15 Section at the level of Pons Answers 9 13. Internal Carotid Artery 14. Cavernous Sinus 10. IV Ventricle Fig. 1.3 Post Contrast Axial MR Image of the brain 8. Cerebellar Hemisphere 9. Vermis 8 15. Middle Cerebellar Peduncle 11. Pons 12. Basilar Artery 16. Internal Auditory Canal 17. Temporal Lobe
  • 11. 20 22 19 18 21 Post Contrast sagittal T1 Wtd M.R.I. Section at the level of Mid Brain Answers 18. Aqueduct of Sylvius 19. Midbrain 20. Orbits Fig. 1.4 Post Contrast Axial MR Image of the brain 21. Posterior Cerebral Artery 22. Middle Cerebral Artery
  • 12. 27 25 24 Post Contrast sagittal T1 Wtd M.R.I. Section at the level of the III Ventricle Answers 23 26 23. Occipital Lobe 24. III Ventricle 25. Frontal Lobe Fig. 1.5 Post Contrast Axial MR Image of the brain 26. Temporal Lobe 27. Sylvian Fissure
  • 13. 38 37 32 36 31 35 Post Contrast sagittal T1 Wtd M.R.I. 30 Section at the level of Thalamus 29 Answers 34 28. Superior Sagittal Sinus 29. Occipital Lobe 33 28 33. Thalamus 34. Temporal Lobe 30. Choroid Plexus within the 35. Internal Capsule occipital horn Fig. 1.6 Post Contrast Axial MR Image of the brain 36. Putamen 31. Internal Cerebral Vein 37. Caudate Nucleus 32. Frontal Horn 38. Frontal Lobe
  • 14. 41 40 Post Contrast sagittal T1 Wtd M.R.I. 39 Section at the level of Corpus Callosum Answers 39. Splenium of corpus callosum 40. Choroid plexus within the Fig. 1.7 Post Contrast Axial MR Image of the brain body of lateral ventricle 41. Genu of corpus callosum
  • 15. 44 43 Post Contrast sagittal T1 Wtd M.R.I. 42 Section at the level of Body of Corpus Callosum Answers 42. Parietal Lobe Fig. 1.8 Post Contrast Axial MR Image of the brain 43. Body of the Corpus Callosum 44. Frontal Lobe
  • 16. 46 Post Contrast sagittal T1 Wtd M.R.I. Section above the Corpus Callosum 45 Answers 45. Parietal Lobe 46. Frontal Lobe Fig. 1.9 Post Contrast Axial MR Image of the brain
  • 17. Normal anatomical structure of head on MRI
  • 18. T2WI
  • 19. T1WI
  • 22. T1WI ( sagittal section ) Corpus callosum; optic chiasm; pituitary gland; medulla oblongata
  • 23. MRI diagnosis of brain vascular diseases • Intra cerebral Hemorrhage • Cerebral Infarction • Intracranial Aneurysm
  • 24. Brain bleed (hemorrhage) • Causes : high blood pressure, vascular malformation and tumor • Stage : acute, sub acute, chronic
  • 25. MRI appearances of hemorrhage at different stage • Acute hemorrhage MRI - iso-intensity on T1WI, slightly low or low intensity on T2WI( ideally MR was poor than CT for Acute hemorrhage ). • Sub acute hemorrhage MRI - iso- or high signal intensity on T1WI, iso- or slightly high signal intensity on T2WI. • Chronic hemorrhage MRI - high signal intensity both on T1WI/T2WI.
  • 28. MRI diagnosis of cerebral infarction
  • 29. MR appearances of cerebral infarction • High signal intensity at Acute , subacute and chronic stage on T2WI because of increment of fluid at infarction. • Iso-intensity at acute stage , iso- or slightly low intensity at subacute stage, low intensity at chronic stage on T1WI. • Flair and DWI sequences are more sensitive for detecting acute infarction.
  • 30. MR&CT appearances of acute cerebral infarction T2WI MR:44396 T1WI Flair
  • 31. MR&CT appearances of acute cerebral infarction MR:44396 T2WI T1WI Flair
  • 37. Chronic infarction at brain stem and cerebellum—T2WI
  • 38. Chronic infarction at brain stem and cerebellum—T1WI
  • 39. MRI diagnosis of head trauma
  • 40. The types of head trauma     Skull fracture traumatic cerebral swelling brain contusions Intracranial bleed of trauma – – – – Epidural hematoma Subdural hematoma Subarachnoid hemorrhage Intracerebral hematoma
  • 41. MR diagnosis of cranial trauma Epidural hematoma : ‫ ٭‬direct violence on skull ‫٭‬skull fracture and deformation ‫٭‬direct laceration or tearing of meningeal arteries ‫ ٭‬local hematoma ,not across cranial suture ‫٭‬shape of duple convex mirror
  • 42. MR FEATURES ‫ ٭‬shape of hematoma is biconvex ‫ ٭‬signal intensity of hematoma varies greatly depending on times. ‫ ٭‬at acute stage ( 0~2 days ), iso-intensity on T1WI , low intensity on T2WI. ‫٭‬at subacute stage ( 3~14 days ), becoming high signal intensity from rim to center on T1WI, still low signal intensity at 6~8 days and high signal intensity after 8 day on T2WI. ‫ ٭‬at chronic stage (14 days later) , high signal intensity on both T1WI and T2WI for quite long times (may be several months)
  • 45. Subdural hematoma ‫٭‬Location: supratentorial convexity. ‫ ٭‬Caused by stretching and tearing of bridging veins. ‫ ٭‬Hematoma is located between dura mater and arachnoid. Often quite large extent , across cranial suture. ‫ ٭‬MR appearances : shape of hematoma semilunar , signal changes of hematoma similar to epidural hematoma at different stages.
  • 46. Subacute Subdural Hematoma Axial T1-weighted magnetic resonance imaging demonstrates bilateral subacute subdural hematomas with T2-weighted magnetic resonance imaging in a increased signal intensity. Areas of intermediate intensity patient with subdural hematoma shows blood products of differing ages. represent more acute hemorrhage into the subacute collections.
  • 47. Subacute subdural hematoma at left frontal-temporal area
  • 48. Subacute subdural hematoma at left frontal-temporal area
  • 49. MR Features of brain contusion ‫ ٭‬Often involve the temporal and frontal lobe. • Temporal lobe lesions tend to lie just above the petrous bone or posterior to the greater sphenoid wing. • Frontal lobe lesions occur just above the cribriform plate, orbit, planum sphnoidale, and lesser sphenoid wing.
  • 50. MR appearances ‫ ٭‬MR is more sensitive than CT to find small contusion because of easy to find edema caused by contusion. ‫٭‬hemorrhagic foci appear petechia or multiple confluent regions with high signal intensity. ‫ ٭‬easy to find contusion at brain stem.
  • 51. Contusion and epidural hemorrhage at both temporal lobe and frontal lobe
  • 52. Contusion and epidural hemorrhage at both temporal lobe and frontal lobe
  • 53. Multiple contusions at both sides of frontal and temporal lobes
  • 54. Multiple contusions at both sides of frontal and temporal lobes
  • 55. INTRACRANIAL TUMORS ‫ ٭‬primary (80%) :originating from cranial bone, cranial meninges, brain tissues, vessels, cranial nerves, pituitary gland, etc. glioma(50%) , meningioma(14%) , pituitary tumor (11%) , acoustic neuroma(7%) ‫٭‬secondary (20%) : metastasis , involved by from near structures. tumor
  • 56. The types of intracranial tumors • Intraaxial brain tumors : 1.glioma( astrocytoma and oligodendroglioma) 2.ependymoma 3.medulloblastoma 4.hemangioblastoma 5.papilloma choroideum 6.metastases
  • 57. The types of intracranial tumors • Extraaxial brain tumors 1.meningioma 2.craniopharyngioma 3.pituitary tumor 4.nerve sheath tumors-acoustic schwannoma 5.epidermorid cyst, dermoid cyst and hamartomas
  • 58. CT and MRI Signs for diagnosis of intracranial tumors Direct signs 、 1. tumor or occupying lesion. 2. abnormal density or signal. 3. enhancement in different degree on enhanced scan.
  • 59. Indirect signs 1. shift of near structures 2. edema in brain tissue near tumor 3. Intratumoral bleed 4. Intratumoral calcification 5. bone changes
  • 60. Astrocytoma lower grading of astrocytoma , grading I or II . • Often in adult (20~40 years ) -- more occult in cerebral hemisphere , grading II , solid • child– less seen , more in cerebellum , grading I, cyst
  • 61. Astrocytoma MR : Isointensity on T1WI , unclear border , high or slightly high signal intensity on T2WI no or slight occupying effect , no or slight enhancement.
  • 64. Astrocytoma high grading ( grading III or IV) • Fast growing • Occur in any age
  • 65. Imaging appearances of high grading astrocytoma • Obvious occupying effects ,infiltrating growing with unclear margin , growing across lobe and hemisphere. • Necrosis, cyst , bleed. • Obvious brain edema around tumor. • Obvious uneven or ring-like enhancement.
  • 69. Brain metastasis • Old age • Single or multiple • Multiple appearances on CT or MR, but often shown in nodule • Heterogeneous density or signal, central necrosis with lower density or signal on T1WI. • Ring-like or even enhancement • Obviously finger-like peritumoral edema
  • 71. Metastasis from lung cancer uncontrast contrast
  • 72. Metastasis from lung cancer uncontrast contrast
  • 73. Imaging of meningioma • Round or hemishere mass occur mostly in convexity of brain , especially sagittal sinus. • Mass with clear margin which was encysted with cerebral spinal fluid and/or vessels. • Iso- or slightly high density on plain CT and low signal on T1WI, iso- or slightly high signal on T2WI, which was enhanced obviously and evenly. • A broad thickened dural-based margin which was called “tail sign” . • Edema may be not or obvious. • Local bone changes including destruction, thin or thickness.
  • 77. Acoustic schwannoma • Benign tumor, occur mostly at middle age people, approximately 7﹪~8﹪ of all primary intracranial neoplasms. • Ovoid or tubular tumors may occur in the internal auditory canal and cerebellopontine angle cistern . • Tumor may be part of solid and cystic . • On Plain CT, solid part of tumor was iso-density ,and cystic part was low density. • Iso-intensity or low signal intensity were seen in solid or cystic part of tumor on T1WI, but high or very high signal intensity on T2WI,. • Obvious enhancement was seen on solid tumor. • Enlargement of internal auditory canal.