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STEPHEN MCCOOLSTEPHEN MCCOOL
THE UNIVERSITY OF MONTANATHE UNIVERSITY OF MONTANA
MISSOULA, MONTANAMISSOULA, MONTANA
Building a Faculty Publication Record:Building a Faculty Publication Record:
A Course Presented byA Course Presented by
Tshwane University of TechnologyTshwane University of Technology
and The University of Montanaand The University of Montana
BackgroundBackground
 Life-long academicLife-long academic
 Over 200 publications emphasizingOver 200 publications emphasizing
 Visitor management in protected areasVisitor management in protected areas
 Sustainable tourismSustainable tourism
 Public engagement in planning and managementPublic engagement in planning and management
 New ways of thinking about planningNew ways of thinking about planning
 Served as an Associate Editor or Reviewer forServed as an Associate Editor or Reviewer for
a number of journalsa number of journals
 Work collaboratively with African writersWork collaboratively with African writers
Course GoalsCourse Goals
 ImmediateImmediate
 Understanding of the manuscript preparation andUnderstanding of the manuscript preparation and
submission processsubmission process
 Long termLong term
 Build confidence in writing and publicationBuild confidence in writing and publication
 Increase publication output of TUTIncrease publication output of TUT
 Enhance the contribution of TUT to national goalsEnhance the contribution of TUT to national goals
through respected research andthrough respected research and
developmentdevelopment
Course ProceduresCourse Procedures
 Facilitated discussionFacilitated discussion
 Everyone has experience or expertise to contributeEveryone has experience or expertise to contribute
 Small group exercisesSmall group exercises
 Provide opportunities to develop review skillsProvide opportunities to develop review skills
 Large group discussionsLarge group discussions
 Publication issues common across fieldsPublication issues common across fields
 ExamplesExamples
 Bring the abstract to reality; yours and mineBring the abstract to reality; yours and mine
 AdaptabilityAdaptability
Course ComponentsCourse Components
 Science Publications in ContemporaryScience Publications in Contemporary
AcademiaAcademia
 Emphasizes theEmphasizes the WhyWhy
 Constructing the ManuscriptConstructing the Manuscript
 Focuses on theFocuses on the WhatWhat
 Producing the PublicationProducing the Publication
 Highlights theHighlights the HowHow
Key ReferenceKey Reference
 Day, R.A., and B. Gastel. 2006. How to writeDay, R.A., and B. Gastel. 2006. How to write
and publish a scientific paper (6and publish a scientific paper (6thth
edition).edition).
Greenwood Press, Westport, CT.Greenwood Press, Westport, CT.
Importance of Peer ReviewedImportance of Peer Reviewed
PublicationPublication
 Knowledge has limited value if notKnowledge has limited value if not
disseminateddisseminated
 Scientific knowledge must be disseminated inScientific knowledge must be disseminated in
particular waysparticular ways
 Ensures credibility and quality of workEnsures credibility and quality of work
 Brings prestige and status to university,Brings prestige and status to university,
attracting students and fundingattracting students and funding
 Completes the research processCompletes the research process
 Complements teachingComplements teaching
What Purposes DoesWhat Purposes Does
Publication Serve?Publication Serve?
 Advances knowledgeAdvances knowledge
 Makes others aware of workMakes others aware of work
 Helps build community of scientific practiceHelps build community of scientific practice
 Results in improved managementResults in improved management
 Builds sensitivity to consequences of actionsBuilds sensitivity to consequences of actions
But, Publication of Scientific FindingsBut, Publication of Scientific Findings
Must Meet Certain Quality StandardsMust Meet Certain Quality Standards
 Publication of findings occurs in scientificPublication of findings occurs in scientific
journals and at conferencesjournals and at conferences
 These are the principal means of formalThese are the principal means of formal
communication among scientistscommunication among scientists
 Such publication requires an independentSuch publication requires an independent
judgment about quality of the research andjudgment about quality of the research and
manuscriptmanuscript
 Publication decisions follow a public andPublication decisions follow a public and
explicit processexplicit process
Writing Should Be Done With …Writing Should Be Done With …
 Clarity (to communicate)Clarity (to communicate)
 Explicitness (for understandability)Explicitness (for understandability)
 Detail (for reproducibility)Detail (for reproducibility)
Types of Scientific ManuscriptsTypes of Scientific Manuscripts
 Data basedData based
 QuantitativeQuantitative
 PrimaryPrimary
 SecondarySecondary
 QualitativeQualitative
 ReviewReview
 Synthesize literatureSynthesize literature
 Propose new theories, approachesPropose new theories, approaches
 OthersOthers
 Book reviews, opinion, responseBook reviews, opinion, response
What Does “peer reviewed” Mean?What Does “peer reviewed” Mean?
 Peers are colleagues with similar interests andPeers are colleagues with similar interests and
expertiseexpertise
 Peer review generally conductedPeer review generally conducted
independently and anonymouslyindependently and anonymously
 Peers use their experience and expertise toPeers use their experience and expertise to
judge how well a manuscript meets thejudge how well a manuscript meets the
journal’s criteria and general scientific criteriajournal’s criteria and general scientific criteria
What is a “technically refereed”What is a “technically refereed”
Journal?Journal?
 Technically refereed means another personTechnically refereed means another person
manages the review process and makes themanages the review process and makes the
publication decisionpublication decision
 Selected and managed by another person,Selected and managed by another person,
usually a journal editorusually a journal editor
 Decision to publish is held by editorDecision to publish is held by editor
Peer Review ProcessPeer Review Process
 Submit unpublished manuscriptSubmit unpublished manuscript
 Editor selects Associate Editor to manageEditor selects Associate Editor to manage
reviewsreviews
 Peers review and evaluate manuscriptPeers review and evaluate manuscript
 Associate Editor reads reviews and manuscriptAssociate Editor reads reviews and manuscript
 Makes recommendation to EditorMakes recommendation to Editor
 Editor makes decision and notifies author(s)Editor makes decision and notifies author(s)
Criteria for Evaluating ManuscriptCriteria for Evaluating Manuscript
 Each journal has ownEach journal has own
 But, generally:But, generally:
 Problem framedProblem framed
 Research is new and of interest to journal readersResearch is new and of interest to journal readers
 Methods appropriately described and usedMethods appropriately described and used
 Conclusions based on resultsConclusions based on results
 OthersOthers
 Clarity of presentationClarity of presentation
 Importance of problemImportance of problem
 Salience to journal goalsSalience to journal goals
Overview of Publication ProcessOverview of Publication Process
 Prepare proposal to conduct researchPrepare proposal to conduct research
 Conduct researchConduct research
 Write manuscript draftWrite manuscript draft
 Submit to journalSubmit to journal
 Manuscript reviewedManuscript reviewed
 Editor decisionEditor decision
 Manuscript revisedManuscript revised
 Manuscript acceptedManuscript accepted
 Manuscript publishedManuscript published
Prepare Proposal and ConductPrepare Proposal and Conduct
ResearchResearch
 Successful publication starts with the proposalSuccessful publication starts with the proposal
and continues with the researchand continues with the research
 Research that is not well founded, lacks aResearch that is not well founded, lacks a
conceptual basis, executed poorly, or usesconceptual basis, executed poorly, or uses
inappropriate methodology is unlikely to beinappropriate methodology is unlikely to be
publishablepublishable
 Only stage of the process that cannot beOnly stage of the process that cannot be
changedchanged
Proposal KeysProposal Keys
 Find colleagues to review proposalFind colleagues to review proposal
 Do adequate literature searchDo adequate literature search
 Document relevancy and significance ofDocument relevancy and significance of
problemproblem
 Link research to a conceptual foundationLink research to a conceptual foundation
To What Journal Do You Submit?To What Journal Do You Submit?
 Decision to be made prior to writingDecision to be made prior to writing
manuscriptmanuscript
 Tailor manuscript to journal audienceTailor manuscript to journal audience
 Need to know format requirementsNeed to know format requirements
 Journals vary in their reputation and respectJournals vary in their reputation and respect
they receive—journal impactthey receive—journal impact
 Read Aims and Scope for journalRead Aims and Scope for journal
 Review articles published in issues to get aReview articles published in issues to get a
sense of the topicssense of the topics
So, How Do You Prepare aSo, How Do You Prepare a
Manuscript?Manuscript?
 What is the goal?What is the goal?
 What story do you want to tell?What story do you want to tell?
 Who will be the audience?Who will be the audience?
 What are the journal requirements ?What are the journal requirements ?
 Length, organization, etc.Length, organization, etc.
 Who are the authors?Who are the authors?
 What time do you have for writing?What time do you have for writing?
 What kind of manuscript?What kind of manuscript?
Manuscript PreparationManuscript Preparation
 Two prerequisites to successful publicationTwo prerequisites to successful publication
 Good research designGood research design
 Only part of process that cannot be changedOnly part of process that cannot be changed
 Framing of the question or subject of the researchFraming of the question or subject of the research
 Necessary but not sufficientNecessary but not sufficient
Other ConditionsOther Conditions
 Facilitative administrative climateFacilitative administrative climate
 Time to writeTime to write
 Don’t drop ms. for long periods of timeDon’t drop ms. for long periods of time
 Find a time of day to think and writeFind a time of day to think and write
 Good command of languageGood command of language
 Get editor if notGet editor if not
 Grasp of the relevant literatureGrasp of the relevant literature
 Open to critiqueOpen to critique
 Tough at times, reviewers constructiveTough at times, reviewers constructive
 PersistencePersistence
Some Ethical ConsiderationsSome Ethical Considerations
 Authorship (more on this later)Authorship (more on this later)
 Acknowledgements of prior researchAcknowledgements of prior research
 AuthenticityAuthenticity
 OriginalityOriginality
 Always credit othersAlways credit others
Who Are the Authors?Who Are the Authors?
 Single or multiple authorshipSingle or multiple authorship
 Authorship order is a BIG dealAuthorship order is a BIG deal
 Role of each authorRole of each author
 How do you decide?How do you decide?
 Generally speaking, first author did most ofGenerally speaking, first author did most of
the work or developed ideathe work or developed idea
 Special case of graduate studentsSpecial case of graduate students
Elements of the ManuscriptElements of the Manuscript
 Conceptual organizationConceptual organization
 Practical organizationPractical organization
Conceptual OrganizationConceptual Organization
 The questionThe question
 What is the paper about?What is the paper about?
 MethodsMethods
 How was the research collected?How was the research collected?
 ResultsResults
 What were the outcomes of the research?What were the outcomes of the research?
 DiscussionDiscussion
 What does it all mean?What does it all mean?
Practical OrganizationPractical Organization
 Varies somewhat by journalVaries somewhat by journal
 But most likely:But most likely:
 AbstractAbstract
 IntroductionIntroduction
 Conceptual Framework/Literature ReviewConceptual Framework/Literature Review
 MethodsMethods
 ResultsResults
 DiscussionDiscussion
 ConclusionConclusion
 But seeBut see Instructions to AuthorsInstructions to Authors
Group ExercisesGroup Exercises
 Four groups, participants randomly assignedFour groups, participants randomly assigned
Tourism Carrying Capacity …Tourism Carrying Capacity …
Small Group ExerciseSmall Group Exercise
 Review assigned manuscriptReview assigned manuscript
 How well has the author(s) described theHow well has the author(s) described the
problem and the conceptual foundation for theproblem and the conceptual foundation for the
manuscript?manuscript?
Purpose of the manuscriptPurpose of the manuscript
Review of the conceptual foundationReview of the conceptual foundation
Recommendations for improvementRecommendations for improvement
Introduction SectionIntroduction Section
 PurposePurpose
 Describe scope, context and importance ofDescribe scope, context and importance of
research questionresearch question
 IssuesIssues
 Lack of statement ofLack of statement of
 Research questionResearch question
 ObjectivesObjectives
 Organization of paperOrganization of paper
The Introduction:The Introduction:
What it DoesWhat it Does
 Describes/frames the questionDescribes/frames the question
 its context andits context and
 why it is importantwhy it is important
The Introduction:The Introduction:
Hints for PreparationHints for Preparation
 Generally, relatively short (500-750 words orGenerally, relatively short (500-750 words or
so)so)
 Cites a bit of literatureCites a bit of literature
 Finishes with the goals of the paperFinishes with the goals of the paper
 Goes from the broad to the narrowGoes from the broad to the narrow
 Funnel approachFunnel approach
 Describes context and place of research in thatDescribes context and place of research in that
contextcontext
Introduction SectionIntroduction Section
 Write in one sentence to yourself the purpose ofWrite in one sentence to yourself the purpose of
the paperthe paper
 ““This paper addresses the relationship betweenThis paper addresses the relationship between
vulnerable populations and access to health care.”vulnerable populations and access to health care.”
 Provide sense of importance:Provide sense of importance:
 ““low income families are at a higher risk of disease;low income families are at a higher risk of disease;
reducing such risk requires access to healthcare”reducing such risk requires access to healthcare”
 Provide salience:Provide salience:
 ““Health care costs can be reduced by providingHealth care costs can be reduced by providing
efficient, equitable access to vulnerable populations”efficient, equitable access to vulnerable populations”
Literature Review/ConceptualLiterature Review/Conceptual
Framework SectionFramework Section
 PurposePurpose
 Refine the problem statement, identify keyRefine the problem statement, identify key
variables, develop hypothesesvariables, develop hypotheses
 IssuesIssues
 AdequacyAdequacy
 RelevancyRelevancy
 FoundationFoundation
Literature Review/ConceptualLiterature Review/Conceptual
Framework:Framework:
What it DoesWhat it Does
 Refines the problem statementRefines the problem statement
 Develop a conceptual background needed forDevelop a conceptual background needed for
the methodologythe methodology
 Identify and provide foundation for researchIdentify and provide foundation for research
hypotheseshypotheses
 Provide reader with understanding of gaps inProvide reader with understanding of gaps in
knowledge or priority needsknowledge or priority needs
Literature Review/ConceptualLiterature Review/Conceptual
Framework:Framework:
Hints for PreparationHints for Preparation
 Often requires considerable “library” timeOften requires considerable “library” time
 Much of this can be conducted in researchMuch of this can be conducted in research
proposal stageproposal stage
 Literature is searched for papers working onLiterature is searched for papers working on
similar questions and/or conceptssimilar questions and/or concepts
 Written in present tense primarilyWritten in present tense primarily
Literature Review/ConceptualLiterature Review/Conceptual
Framework SectionFramework Section
 AdequacyAdequacy
 What are the principal references dealing with theWhat are the principal references dealing with the
research question?research question?
 How do those references help you and the readerHow do those references help you and the reader
understand the problem?understand the problem?
 What key findings exist that help you frame theWhat key findings exist that help you frame the
question?question?
Literature Review/ConceptualLiterature Review/Conceptual
Framework SectionFramework Section
 RelevancyRelevancy
 Do the references help identify key variables orDo the references help identify key variables or
establish hypotheses?establish hypotheses?
 Literature provides foundation for methods andLiterature provides foundation for methods and
helps interpret resultshelps interpret results
 What literature helps develop a framework for theWhat literature helps develop a framework for the
question?question?
Literature Review/ConceptualLiterature Review/Conceptual
Framework SectionFramework Section
 Introduce concepts to lay a foundation forIntroduce concepts to lay a foundation for
later uselater use
 Use a segue to introduce conceptsUse a segue to introduce concepts
 ““Smith and others (1990) found thatSmith and others (1990) found that
vulnerability to disease was a function ofvulnerability to disease was a function of
several variables, including location ofseveral variables, including location of
residency and income. The “V” index is anresidency and income. The “V” index is an
overall measure of such vulnerability .”overall measure of such vulnerability .”
Rather than in the methods “the V-index wasRather than in the methods “the V-index was
calculated by …” without a previous mentioncalculated by …” without a previous mention
Methods SectionMethods Section
 PurposePurpose
 Explain/describe methods used in just enoughExplain/describe methods used in just enough
detail so that the research can be replicateddetail so that the research can be replicated
 Population and how sampledPopulation and how sampled
 Independent and dependent variables and howIndependent and dependent variables and how
measuredmeasured
 Analysis approach and techniquesAnalysis approach and techniques
Methods:Methods:
What it DoesWhat it Does
 Experimental designExperimental design
 TreatmentsTreatments
 Population and how sampledPopulation and how sampled
 Materials usedMaterials used
 Principal dependent and independent variablesPrincipal dependent and independent variables
(e.g., what was measured and how)(e.g., what was measured and how)
 Why these methods were chosenWhy these methods were chosen
Methods SectionMethods Section
 Behind every measure is a conceptBehind every measure is a concept
 Was it discussed in the literature review?Was it discussed in the literature review?
 Behind every analysis is a hypothesisBehind every analysis is a hypothesis
 Were potential relationships mentioned in theWere potential relationships mentioned in the
literature review?literature review?
Methods SectionMethods Section
 IssuesIssues
 Principally, lack of detailPrincipally, lack of detail
 Limitations not recognizedLimitations not recognized
 Discussion of results included in sectionDiscussion of results included in section
Methods SectionMethods Section
 ““The population for this study consisted of adults (agedThe population for this study consisted of adults (aged
18 and over) living in the Caprivi region of Namibia.”18 and over) living in the Caprivi region of Namibia.”
 ““This population was sampled through a hierarchalThis population was sampled through a hierarchal
methodology: First, clinics were randomly sampled formethodology: First, clinics were randomly sampled for
the study, then residents visiting those clinics werethe study, then residents visiting those clinics were
selected as they entered the clinic on randomly selectedselected as they entered the clinic on randomly selected
days during the three summer months of 2010.”days during the three summer months of 2010.”
 ““This sampling methodology is designed to beThis sampling methodology is designed to be
representative only of those with illness and withrepresentative only of those with illness and with
access to the clinic. Thus, the results may notaccess to the clinic. Thus, the results may not
adequately represent those ill patients without means ofadequately represent those ill patients without means of
access.”access.”
Methods:Methods:
Hints for PreparationHints for Preparation
 Written in past tenseWritten in past tense
 Summarize research design from proposal orSummarize research design from proposal or
study planstudy plan
 Do not need all the detail, just enough forDo not need all the detail, just enough for
someone else to replicate the studysomeone else to replicate the study
Small Group Exercise 2Small Group Exercise 2
 What methodologies were used and do thoseWhat methodologies were used and do those
methodologies seem appropriate for themethodologies seem appropriate for the
question?question?
 Research design, population, independentResearch design, population, independent
variables, dependent variablesvariables, dependent variables
 How variables measuredHow variables measured
 Recommendations to strengthenRecommendations to strengthen
methodologies, particularly analysismethodologies, particularly analysis
Results:Results:
What it DoesWhat it Does
 Describes the outcome of the researchDescribes the outcome of the research
identified in the introduction and conceptualidentified in the introduction and conceptual
framework sectionframework section
 Involves a simple reporting of outcomesInvolves a simple reporting of outcomes
Results:Results:
Hints for PreparationHints for Preparation
 May involve two components:May involve two components:
 1. description of principal variables1. description of principal variables
 2. testing of hypotheses with inferential statistics2. testing of hypotheses with inferential statistics
 Focused on the hypotheses or questionsFocused on the hypotheses or questions
 Use tables or figures only when neededUse tables or figures only when needed
 Do not repeat data or statistics shown in tablesDo not repeat data or statistics shown in tables
or figuresor figures
 Use past tenseUse past tense
Implications/Discussion:Implications/Discussion:
What it DoesWhat it Does
 Interpret results within the context of theInterpret results within the context of the
literature review/conceptual frameworkliterature review/conceptual framework
 Discusses relationships between variablesDiscusses relationships between variables
 Challenge existing results or theoriesChallenge existing results or theories
 Suggest future researchSuggest future research
 Describe implications for practiceDescribe implications for practice
Implications/Discussion:Implications/Discussion:
Hints for PreparationHints for Preparation
 Nature of this section varies from journal toNature of this section varies from journal to
journaljournal
 Refer back to literature and introductionRefer back to literature and introduction
 Point out particularly significant results, suchPoint out particularly significant results, such
as surprises or inconsistenciesas surprises or inconsistencies
 Do not repeat resultsDo not repeat results
 Mixture of past and present tenseMixture of past and present tense
Conclusion:Conclusion:
What it DoesWhat it Does
 Provides final summary of research andProvides final summary of research and
implicationsimplications
 May suggest new research lines resulting fromMay suggest new research lines resulting from
Discussion sectionDiscussion section
 Describes overall results and implications forDescribes overall results and implications for
broader contextbroader context
 May suggest a few lines of future researchMay suggest a few lines of future research
Conclusion:Conclusion:
Hints for PreparationHints for Preparation
 Sometimes a separate sectionSometimes a separate section
 Usually short; < 300 wordsUsually short; < 300 words
Literature CitedLiterature Cited
 Ideas, facts, concepts not your own must beIdeas, facts, concepts not your own must be
citedcited
 Generally, citation is of scientific/technicalGenerally, citation is of scientific/technical
articlesarticles
 Gray literature versus white literatureGray literature versus white literature
 Citation style – see journal guidelinesCitation style – see journal guidelines
 Gather literature before writingGather literature before writing
 Use citation softwareUse citation software
Abstract:Abstract:
What it DoesWhat it Does
 Single paragraph summarizing researchSingle paragraph summarizing research
reportedreported
 150-300 words150-300 words
 Last component of the paper writtenLast component of the paper written
 Note: conferences sometimes differentNote: conferences sometimes different
 No cited literature, tables or figuresNo cited literature, tables or figures
Tables and FiguresTables and Figures
 Basic purpose is to display information that isBasic purpose is to display information that is
difficult for a narrativedifficult for a narrative
 Information may be:Information may be:
 Quantitative statisticsQuantitative statistics
 Trends or relationships graphedTrends or relationships graphed
 Qualitative data such as quotesQualitative data such as quotes
Tables and FiguresTables and Figures
 Keep simpleKeep simple
 Independent variables columns (or X axis)Independent variables columns (or X axis)
 Dependent variables rows (or Y axis)Dependent variables rows (or Y axis)
 Tables explicitly labeled, should stand byTables explicitly labeled, should stand by
themselvesthemselves
 Consider page size of journalConsider page size of journal
Writing and EditingWriting and Editing
 Which authors will do whatWhich authors will do what
 Clarify rolesClarify roles
 Lead author writes initial draftLead author writes initial draft
 Authors write various sectionsAuthors write various sections
 Create a statement of purpose firstCreate a statement of purpose first
 Develop outlineDevelop outline
 Use complete sentencesUse complete sentences
 Write from outlineWrite from outline
Writing and EditingWriting and Editing
 Circulate drafts of everythingCirculate drafts of everything
 Find non-involved colleague(s) for review orFind non-involved colleague(s) for review or
talking throughtalking through
 Be familiar with journal requirements (e.g.,Be familiar with journal requirements (e.g.,
manuscript length, organization, citation style,manuscript length, organization, citation style,
etc.)etc.)
 May need to get an editor to help withMay need to get an editor to help with
language and organizationlanguage and organization
Submitting the ManuscriptSubmitting the Manuscript
 Invited submissionsInvited submissions
 Normal submissionsNormal submissions
 Both will go through a review processBoth will go through a review process
 Most journals now have online submissionMost journals now have online submission
 Manuscript should be written cognizant ofManuscript should be written cognizant of
journal audiencejournal audience
Submitting the ManuscriptSubmitting the Manuscript
 Prior to submission,Prior to submission,
 Understand manuscript requirements, e.g., format,Understand manuscript requirements, e.g., format,
tables and figures, literature citation method,tables and figures, literature citation method,
lengthlength
 Carefully review submission process, e.g.,Carefully review submission process, e.g.,
cover letter, where and how the file iscover letter, where and how the file is
uploaded, need for separate files for tables anduploaded, need for separate files for tables and
figuresfigures
Small Group Exercise 3Small Group Exercise 3
 Are the conclusions consistent with the dataAre the conclusions consistent with the data
presented?presented?
 How did you make your decision?How did you make your decision?
 What changes in the conclusion would youWhat changes in the conclusion would you
recommend?recommend?
The Review ProcessThe Review Process
 Can send shudders through your whole body!Can send shudders through your whole body!
 Purpose of the review is to ensure the researchPurpose of the review is to ensure the research
portrayed has been conductedportrayed has been conducted
 AppropriatelyAppropriately
 EthicallyEthically
 With high standards of professional conductWith high standards of professional conduct
 And is originalAnd is original
The Review ProcessThe Review Process
 Editor assigns Associate EditorEditor assigns Associate Editor
 Associate Editor requests two peers,Associate Editor requests two peers,
sometimes three, to review manuscriptsometimes three, to review manuscript
 Peers read and comment on the paper; theyPeers read and comment on the paper; they
may be asked to recommend:may be asked to recommend:
 Accept with no revisionsAccept with no revisions
 Accept with minor revisionsAccept with minor revisions
 Accept with major revisionsAccept with major revisions
 RejectionRejection
The Review ProcessThe Review Process
 Peer or refereedPeer or refereed
 Peer – scientists with similar research expertisePeer – scientists with similar research expertise
 Refereed – a decision to publish is made byRefereed – a decision to publish is made by
someone other than the authorsomeone other than the author
 So, most journal articles are technically refereedSo, most journal articles are technically refereed
and peer reviewedand peer reviewed
Small Group Exercise 4Small Group Exercise 4
 How well does the manuscript meet theHow well does the manuscript meet the
criteria used for evaluation by the Journal?criteria used for evaluation by the Journal?
 What criteria were used?What criteria were used?
 How did the ms. meet each of the criteria?How did the ms. meet each of the criteria?
 What would be your decision for publicationWhat would be your decision for publication
and why?and why?
Open, Blind or Double BlindOpen, Blind or Double Blind
Review ProcessReview Process
 Open review – reviewers and authors namesOpen review – reviewers and authors names
are known to each otherare known to each other
 Blind – reviewers know who authored theBlind – reviewers know who authored the
manuscript they are reviewing, but the authorsmanuscript they are reviewing, but the authors
do not know who the reviewers aredo not know who the reviewers are
 Double Blind – The names of reviewers andDouble Blind – The names of reviewers and
authors are kept confidential; only theauthors are kept confidential; only the
associate editor and editor knowassociate editor and editor know
Purpose of Blind ReviewsPurpose of Blind Reviews
 Objectivity and candidnessObjectivity and candidness
 Removes any potential bias resulting fromRemoves any potential bias resulting from
interpersonal relationshipsinterpersonal relationships
 NegativesNegatives
 Sometimes reviews are very, and unnecessarily.Sometimes reviews are very, and unnecessarily.
criticalcritical
 Most journals use double-blind reviewsMost journals use double-blind reviews
 Some journals have an option of a reviewerSome journals have an option of a reviewer
letting the author know his or her nameletting the author know his or her name
The Review ProcessThe Review Process
 Recommendations are based on the journal’sRecommendations are based on the journal’s
review criteria and the reviewers’review criteria and the reviewers’
understanding of the scienceunderstanding of the science
 Associate Editor reads reviews and manuscriptAssociate Editor reads reviews and manuscript
and makes recommendation to editorand makes recommendation to editor
 Editor makes decision and notifies authorEditor makes decision and notifies author
 Editor lists needed revisionsEditor lists needed revisions
The Review ProcessThe Review Process
 In many journals, the rejection rate is betweenIn many journals, the rejection rate is between
60 and 80%60 and 80%
 Most manuscripts that are accepted areMost manuscripts that are accepted are
returned with either a “minor revision” or areturned with either a “minor revision” or a
“major revision” recommendation“major revision” recommendation
Author’s Response to ReviewsAuthor’s Response to Reviews
 For rejected manuscripts:For rejected manuscripts:
 Forget itForget it
 But better, take into account comments, revise andBut better, take into account comments, revise and
submit someplace elsesubmit someplace else
 For manuscripts with a revisionFor manuscripts with a revision
recommendationrecommendation
 Take into account comments and reviseTake into account comments and revise
 Resubmit with reconciliation document toResubmit with reconciliation document to
show how the comments were addressedshow how the comments were addressed
Critique of Peer Review ProcessCritique of Peer Review Process
 Slow – may take months, even more than aSlow – may take months, even more than a
yearyear
 Reviewers may not hold expertiseReviewers may not hold expertise
 Non constructive, negative, competitiveNon constructive, negative, competitive
commentscomments
 Dissenting theories suppressedDissenting theories suppressed
Critique of Peer Review ProcessCritique of Peer Review Process
 Drummond Rennie, deputy editor ofDrummond Rennie, deputy editor of Journal of the AmericanJournal of the American
Medical AssociationMedical Association is an organizer of the Internationalis an organizer of the International
Congress on Peer Review and Biomedical Publication, whichCongress on Peer Review and Biomedical Publication, which
has been held every four years since 1986.has been held every four years since 1986.[23][23]
He remarksHe remarks,,
 There seems to be no study too fragmented, no hypothesis too trivial,There seems to be no study too fragmented, no hypothesis too trivial,
no literature too biased or too egotistical, no design too warped, nono literature too biased or too egotistical, no design too warped, no
methodology too bungled, no presentation of results too inaccurate, toomethodology too bungled, no presentation of results too inaccurate, too
obscure, and too contradictory, no analysis too self-serving, noobscure, and too contradictory, no analysis too self-serving, no
argument too circular, no conclusions too trifling or too unjustified,argument too circular, no conclusions too trifling or too unjustified,
and no grammar and syntax too offensive for a paper to end up in print.and no grammar and syntax too offensive for a paper to end up in print.
Critique of Peer Review ProcessCritique of Peer Review Process
 Richard Horton, editor of the British medical journalRichard Horton, editor of the British medical journal TheThe
LancetLancet, has said that, has said that
 The mistake, of course, is to have thought that peer review was anyThe mistake, of course, is to have thought that peer review was any
more than a crude means of discovering the acceptability — not themore than a crude means of discovering the acceptability — not the
validity — of a new finding. Editors and scientists alike insist on thevalidity — of a new finding. Editors and scientists alike insist on the
pivotal importance of peer review. We portray peer review to the publicpivotal importance of peer review. We portray peer review to the public
as a quasi-sacred process that helps to make science our most objectiveas a quasi-sacred process that helps to make science our most objective
truth teller. But we know that the system of peer review is biased,truth teller. But we know that the system of peer review is biased,
unjust, unaccountable, incomplete, easily fixed, often insulting, usuallyunjust, unaccountable, incomplete, easily fixed, often insulting, usually
ignorant, occasionally foolish, and frequently wrongignorant, occasionally foolish, and frequently wrong
Re-SubmissionRe-Submission
 Following revision, the ms is again submittedFollowing revision, the ms is again submitted
 Editor makes a preliminary decision aboutEditor makes a preliminary decision about
what should be done with the ms.what should be done with the ms.
Editor’s DecisionEditor’s Decision
 Sometimes revision referred back to AssociateSometimes revision referred back to Associate
EditorEditor
 Sometimes additional reviews are conductedSometimes additional reviews are conducted
 Generally, though if the author has made goodGenerally, though if the author has made good
faith effort to revise, the ms. is accepted, butfaith effort to revise, the ms. is accepted, but
still may need more revisionstill may need more revision
Publication ProcessPublication Process
 Following the decision to accept, the ms. isFollowing the decision to accept, the ms. is
queued for publicationqueued for publication
 This may take several monthsThis may take several months
 Once it has been assigned to an issue, a galleyOnce it has been assigned to an issue, a galley
proof is madeproof is made
 The proof is the mockup of the actual printThe proof is the mockup of the actual print
 Author is responsible for quality controlAuthor is responsible for quality control
 In some cases, a copy editor will makeIn some cases, a copy editor will make
queries to the authorqueries to the author
The Publication ProcessThe Publication Process
 Such queries mostly deal with grammar,Such queries mostly deal with grammar,
citations and figurescitations and figures
 Few other changes are permitted at this pointFew other changes are permitted at this point
 Following revision of any changes, the authorFollowing revision of any changes, the author
approves the galley proofapproves the galley proof
 The journal often provides author with orderThe journal often provides author with order
form for reprintsform for reprints
 Following receipt of galleys, journal putsFollowing receipt of galleys, journal puts
ms. in printing queuems. in printing queue
PublicationPublication
 The ms. appears in the printed publicationThe ms. appears in the printed publication
 Author usually receives a few free copies of theAuthor usually receives a few free copies of the
journaljournal
 Many traditional journals now have earlyMany traditional journals now have early
publication on the Web, prior to a physicalpublication on the Web, prior to a physical
printprint
ConclusionConclusion
 That is the A to Z of publicationThat is the A to Z of publication
 LessonsLessons
 Ms. never perfectMs. never perfect
 Think ahead about what story you want to tellThink ahead about what story you want to tell
 Tend to methodology early, and in the proposalTend to methodology early, and in the proposal
 When reviewing, be constructiveWhen reviewing, be constructive
 Now, start writingNow, start writing
Thank You
Stephen.McCool@umontana.edu
Perspectives on Protected Area Planning
http://pasqueflowerparadigms.blogspot.com

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Tshwane University of Technology Faculty Publication Shortcourse 12-13 June 2013

  • 1. Facilitated byFacilitated by STEPHEN MCCOOLSTEPHEN MCCOOL THE UNIVERSITY OF MONTANATHE UNIVERSITY OF MONTANA MISSOULA, MONTANAMISSOULA, MONTANA Building a Faculty Publication Record:Building a Faculty Publication Record: A Course Presented byA Course Presented by Tshwane University of TechnologyTshwane University of Technology and The University of Montanaand The University of Montana
  • 2. BackgroundBackground  Life-long academicLife-long academic  Over 200 publications emphasizingOver 200 publications emphasizing  Visitor management in protected areasVisitor management in protected areas  Sustainable tourismSustainable tourism  Public engagement in planning and managementPublic engagement in planning and management  New ways of thinking about planningNew ways of thinking about planning  Served as an Associate Editor or Reviewer forServed as an Associate Editor or Reviewer for a number of journalsa number of journals  Work collaboratively with African writersWork collaboratively with African writers
  • 3.
  • 4. Course GoalsCourse Goals  ImmediateImmediate  Understanding of the manuscript preparation andUnderstanding of the manuscript preparation and submission processsubmission process  Long termLong term  Build confidence in writing and publicationBuild confidence in writing and publication  Increase publication output of TUTIncrease publication output of TUT  Enhance the contribution of TUT to national goalsEnhance the contribution of TUT to national goals through respected research andthrough respected research and developmentdevelopment
  • 5. Course ProceduresCourse Procedures  Facilitated discussionFacilitated discussion  Everyone has experience or expertise to contributeEveryone has experience or expertise to contribute  Small group exercisesSmall group exercises  Provide opportunities to develop review skillsProvide opportunities to develop review skills  Large group discussionsLarge group discussions  Publication issues common across fieldsPublication issues common across fields  ExamplesExamples  Bring the abstract to reality; yours and mineBring the abstract to reality; yours and mine  AdaptabilityAdaptability
  • 6. Course ComponentsCourse Components  Science Publications in ContemporaryScience Publications in Contemporary AcademiaAcademia  Emphasizes theEmphasizes the WhyWhy  Constructing the ManuscriptConstructing the Manuscript  Focuses on theFocuses on the WhatWhat  Producing the PublicationProducing the Publication  Highlights theHighlights the HowHow
  • 7. Key ReferenceKey Reference  Day, R.A., and B. Gastel. 2006. How to writeDay, R.A., and B. Gastel. 2006. How to write and publish a scientific paper (6and publish a scientific paper (6thth edition).edition). Greenwood Press, Westport, CT.Greenwood Press, Westport, CT.
  • 8. Importance of Peer ReviewedImportance of Peer Reviewed PublicationPublication  Knowledge has limited value if notKnowledge has limited value if not disseminateddisseminated  Scientific knowledge must be disseminated inScientific knowledge must be disseminated in particular waysparticular ways  Ensures credibility and quality of workEnsures credibility and quality of work  Brings prestige and status to university,Brings prestige and status to university, attracting students and fundingattracting students and funding  Completes the research processCompletes the research process  Complements teachingComplements teaching
  • 9. What Purposes DoesWhat Purposes Does Publication Serve?Publication Serve?  Advances knowledgeAdvances knowledge  Makes others aware of workMakes others aware of work  Helps build community of scientific practiceHelps build community of scientific practice  Results in improved managementResults in improved management  Builds sensitivity to consequences of actionsBuilds sensitivity to consequences of actions
  • 10. But, Publication of Scientific FindingsBut, Publication of Scientific Findings Must Meet Certain Quality StandardsMust Meet Certain Quality Standards  Publication of findings occurs in scientificPublication of findings occurs in scientific journals and at conferencesjournals and at conferences  These are the principal means of formalThese are the principal means of formal communication among scientistscommunication among scientists  Such publication requires an independentSuch publication requires an independent judgment about quality of the research andjudgment about quality of the research and manuscriptmanuscript  Publication decisions follow a public andPublication decisions follow a public and explicit processexplicit process
  • 11. Writing Should Be Done With …Writing Should Be Done With …  Clarity (to communicate)Clarity (to communicate)  Explicitness (for understandability)Explicitness (for understandability)  Detail (for reproducibility)Detail (for reproducibility)
  • 12. Types of Scientific ManuscriptsTypes of Scientific Manuscripts  Data basedData based  QuantitativeQuantitative  PrimaryPrimary  SecondarySecondary  QualitativeQualitative  ReviewReview  Synthesize literatureSynthesize literature  Propose new theories, approachesPropose new theories, approaches  OthersOthers  Book reviews, opinion, responseBook reviews, opinion, response
  • 13. What Does “peer reviewed” Mean?What Does “peer reviewed” Mean?  Peers are colleagues with similar interests andPeers are colleagues with similar interests and expertiseexpertise  Peer review generally conductedPeer review generally conducted independently and anonymouslyindependently and anonymously  Peers use their experience and expertise toPeers use their experience and expertise to judge how well a manuscript meets thejudge how well a manuscript meets the journal’s criteria and general scientific criteriajournal’s criteria and general scientific criteria
  • 14. What is a “technically refereed”What is a “technically refereed” Journal?Journal?  Technically refereed means another personTechnically refereed means another person manages the review process and makes themanages the review process and makes the publication decisionpublication decision  Selected and managed by another person,Selected and managed by another person, usually a journal editorusually a journal editor  Decision to publish is held by editorDecision to publish is held by editor
  • 15. Peer Review ProcessPeer Review Process  Submit unpublished manuscriptSubmit unpublished manuscript  Editor selects Associate Editor to manageEditor selects Associate Editor to manage reviewsreviews  Peers review and evaluate manuscriptPeers review and evaluate manuscript  Associate Editor reads reviews and manuscriptAssociate Editor reads reviews and manuscript  Makes recommendation to EditorMakes recommendation to Editor  Editor makes decision and notifies author(s)Editor makes decision and notifies author(s)
  • 16. Criteria for Evaluating ManuscriptCriteria for Evaluating Manuscript  Each journal has ownEach journal has own  But, generally:But, generally:  Problem framedProblem framed  Research is new and of interest to journal readersResearch is new and of interest to journal readers  Methods appropriately described and usedMethods appropriately described and used  Conclusions based on resultsConclusions based on results  OthersOthers  Clarity of presentationClarity of presentation  Importance of problemImportance of problem  Salience to journal goalsSalience to journal goals
  • 17. Overview of Publication ProcessOverview of Publication Process  Prepare proposal to conduct researchPrepare proposal to conduct research  Conduct researchConduct research  Write manuscript draftWrite manuscript draft  Submit to journalSubmit to journal  Manuscript reviewedManuscript reviewed  Editor decisionEditor decision  Manuscript revisedManuscript revised  Manuscript acceptedManuscript accepted  Manuscript publishedManuscript published
  • 18. Prepare Proposal and ConductPrepare Proposal and Conduct ResearchResearch  Successful publication starts with the proposalSuccessful publication starts with the proposal and continues with the researchand continues with the research  Research that is not well founded, lacks aResearch that is not well founded, lacks a conceptual basis, executed poorly, or usesconceptual basis, executed poorly, or uses inappropriate methodology is unlikely to beinappropriate methodology is unlikely to be publishablepublishable  Only stage of the process that cannot beOnly stage of the process that cannot be changedchanged
  • 19. Proposal KeysProposal Keys  Find colleagues to review proposalFind colleagues to review proposal  Do adequate literature searchDo adequate literature search  Document relevancy and significance ofDocument relevancy and significance of problemproblem  Link research to a conceptual foundationLink research to a conceptual foundation
  • 20. To What Journal Do You Submit?To What Journal Do You Submit?  Decision to be made prior to writingDecision to be made prior to writing manuscriptmanuscript  Tailor manuscript to journal audienceTailor manuscript to journal audience  Need to know format requirementsNeed to know format requirements  Journals vary in their reputation and respectJournals vary in their reputation and respect they receive—journal impactthey receive—journal impact  Read Aims and Scope for journalRead Aims and Scope for journal  Review articles published in issues to get aReview articles published in issues to get a sense of the topicssense of the topics
  • 21. So, How Do You Prepare aSo, How Do You Prepare a Manuscript?Manuscript?  What is the goal?What is the goal?  What story do you want to tell?What story do you want to tell?  Who will be the audience?Who will be the audience?  What are the journal requirements ?What are the journal requirements ?  Length, organization, etc.Length, organization, etc.  Who are the authors?Who are the authors?  What time do you have for writing?What time do you have for writing?  What kind of manuscript?What kind of manuscript?
  • 22. Manuscript PreparationManuscript Preparation  Two prerequisites to successful publicationTwo prerequisites to successful publication  Good research designGood research design  Only part of process that cannot be changedOnly part of process that cannot be changed  Framing of the question or subject of the researchFraming of the question or subject of the research  Necessary but not sufficientNecessary but not sufficient
  • 23. Other ConditionsOther Conditions  Facilitative administrative climateFacilitative administrative climate  Time to writeTime to write  Don’t drop ms. for long periods of timeDon’t drop ms. for long periods of time  Find a time of day to think and writeFind a time of day to think and write  Good command of languageGood command of language  Get editor if notGet editor if not  Grasp of the relevant literatureGrasp of the relevant literature  Open to critiqueOpen to critique  Tough at times, reviewers constructiveTough at times, reviewers constructive  PersistencePersistence
  • 24. Some Ethical ConsiderationsSome Ethical Considerations  Authorship (more on this later)Authorship (more on this later)  Acknowledgements of prior researchAcknowledgements of prior research  AuthenticityAuthenticity  OriginalityOriginality  Always credit othersAlways credit others
  • 25. Who Are the Authors?Who Are the Authors?  Single or multiple authorshipSingle or multiple authorship  Authorship order is a BIG dealAuthorship order is a BIG deal  Role of each authorRole of each author  How do you decide?How do you decide?  Generally speaking, first author did most ofGenerally speaking, first author did most of the work or developed ideathe work or developed idea  Special case of graduate studentsSpecial case of graduate students
  • 26. Elements of the ManuscriptElements of the Manuscript  Conceptual organizationConceptual organization  Practical organizationPractical organization
  • 27. Conceptual OrganizationConceptual Organization  The questionThe question  What is the paper about?What is the paper about?  MethodsMethods  How was the research collected?How was the research collected?  ResultsResults  What were the outcomes of the research?What were the outcomes of the research?  DiscussionDiscussion  What does it all mean?What does it all mean?
  • 28. Practical OrganizationPractical Organization  Varies somewhat by journalVaries somewhat by journal  But most likely:But most likely:  AbstractAbstract  IntroductionIntroduction  Conceptual Framework/Literature ReviewConceptual Framework/Literature Review  MethodsMethods  ResultsResults  DiscussionDiscussion  ConclusionConclusion  But seeBut see Instructions to AuthorsInstructions to Authors
  • 29. Group ExercisesGroup Exercises  Four groups, participants randomly assignedFour groups, participants randomly assigned Tourism Carrying Capacity …Tourism Carrying Capacity …
  • 30. Small Group ExerciseSmall Group Exercise  Review assigned manuscriptReview assigned manuscript  How well has the author(s) described theHow well has the author(s) described the problem and the conceptual foundation for theproblem and the conceptual foundation for the manuscript?manuscript? Purpose of the manuscriptPurpose of the manuscript Review of the conceptual foundationReview of the conceptual foundation Recommendations for improvementRecommendations for improvement
  • 31. Introduction SectionIntroduction Section  PurposePurpose  Describe scope, context and importance ofDescribe scope, context and importance of research questionresearch question  IssuesIssues  Lack of statement ofLack of statement of  Research questionResearch question  ObjectivesObjectives  Organization of paperOrganization of paper
  • 32. The Introduction:The Introduction: What it DoesWhat it Does  Describes/frames the questionDescribes/frames the question  its context andits context and  why it is importantwhy it is important
  • 33. The Introduction:The Introduction: Hints for PreparationHints for Preparation  Generally, relatively short (500-750 words orGenerally, relatively short (500-750 words or so)so)  Cites a bit of literatureCites a bit of literature  Finishes with the goals of the paperFinishes with the goals of the paper  Goes from the broad to the narrowGoes from the broad to the narrow  Funnel approachFunnel approach  Describes context and place of research in thatDescribes context and place of research in that contextcontext
  • 34. Introduction SectionIntroduction Section  Write in one sentence to yourself the purpose ofWrite in one sentence to yourself the purpose of the paperthe paper  ““This paper addresses the relationship betweenThis paper addresses the relationship between vulnerable populations and access to health care.”vulnerable populations and access to health care.”  Provide sense of importance:Provide sense of importance:  ““low income families are at a higher risk of disease;low income families are at a higher risk of disease; reducing such risk requires access to healthcare”reducing such risk requires access to healthcare”  Provide salience:Provide salience:  ““Health care costs can be reduced by providingHealth care costs can be reduced by providing efficient, equitable access to vulnerable populations”efficient, equitable access to vulnerable populations”
  • 35. Literature Review/ConceptualLiterature Review/Conceptual Framework SectionFramework Section  PurposePurpose  Refine the problem statement, identify keyRefine the problem statement, identify key variables, develop hypothesesvariables, develop hypotheses  IssuesIssues  AdequacyAdequacy  RelevancyRelevancy  FoundationFoundation
  • 36. Literature Review/ConceptualLiterature Review/Conceptual Framework:Framework: What it DoesWhat it Does  Refines the problem statementRefines the problem statement  Develop a conceptual background needed forDevelop a conceptual background needed for the methodologythe methodology  Identify and provide foundation for researchIdentify and provide foundation for research hypotheseshypotheses  Provide reader with understanding of gaps inProvide reader with understanding of gaps in knowledge or priority needsknowledge or priority needs
  • 37. Literature Review/ConceptualLiterature Review/Conceptual Framework:Framework: Hints for PreparationHints for Preparation  Often requires considerable “library” timeOften requires considerable “library” time  Much of this can be conducted in researchMuch of this can be conducted in research proposal stageproposal stage  Literature is searched for papers working onLiterature is searched for papers working on similar questions and/or conceptssimilar questions and/or concepts  Written in present tense primarilyWritten in present tense primarily
  • 38. Literature Review/ConceptualLiterature Review/Conceptual Framework SectionFramework Section  AdequacyAdequacy  What are the principal references dealing with theWhat are the principal references dealing with the research question?research question?  How do those references help you and the readerHow do those references help you and the reader understand the problem?understand the problem?  What key findings exist that help you frame theWhat key findings exist that help you frame the question?question?
  • 39. Literature Review/ConceptualLiterature Review/Conceptual Framework SectionFramework Section  RelevancyRelevancy  Do the references help identify key variables orDo the references help identify key variables or establish hypotheses?establish hypotheses?  Literature provides foundation for methods andLiterature provides foundation for methods and helps interpret resultshelps interpret results  What literature helps develop a framework for theWhat literature helps develop a framework for the question?question?
  • 40. Literature Review/ConceptualLiterature Review/Conceptual Framework SectionFramework Section  Introduce concepts to lay a foundation forIntroduce concepts to lay a foundation for later uselater use  Use a segue to introduce conceptsUse a segue to introduce concepts  ““Smith and others (1990) found thatSmith and others (1990) found that vulnerability to disease was a function ofvulnerability to disease was a function of several variables, including location ofseveral variables, including location of residency and income. The “V” index is anresidency and income. The “V” index is an overall measure of such vulnerability .”overall measure of such vulnerability .” Rather than in the methods “the V-index wasRather than in the methods “the V-index was calculated by …” without a previous mentioncalculated by …” without a previous mention
  • 41.
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  • 44. Methods SectionMethods Section  PurposePurpose  Explain/describe methods used in just enoughExplain/describe methods used in just enough detail so that the research can be replicateddetail so that the research can be replicated  Population and how sampledPopulation and how sampled  Independent and dependent variables and howIndependent and dependent variables and how measuredmeasured  Analysis approach and techniquesAnalysis approach and techniques
  • 45. Methods:Methods: What it DoesWhat it Does  Experimental designExperimental design  TreatmentsTreatments  Population and how sampledPopulation and how sampled  Materials usedMaterials used  Principal dependent and independent variablesPrincipal dependent and independent variables (e.g., what was measured and how)(e.g., what was measured and how)  Why these methods were chosenWhy these methods were chosen
  • 46. Methods SectionMethods Section  Behind every measure is a conceptBehind every measure is a concept  Was it discussed in the literature review?Was it discussed in the literature review?  Behind every analysis is a hypothesisBehind every analysis is a hypothesis  Were potential relationships mentioned in theWere potential relationships mentioned in the literature review?literature review?
  • 47. Methods SectionMethods Section  IssuesIssues  Principally, lack of detailPrincipally, lack of detail  Limitations not recognizedLimitations not recognized  Discussion of results included in sectionDiscussion of results included in section
  • 48. Methods SectionMethods Section  ““The population for this study consisted of adults (agedThe population for this study consisted of adults (aged 18 and over) living in the Caprivi region of Namibia.”18 and over) living in the Caprivi region of Namibia.”  ““This population was sampled through a hierarchalThis population was sampled through a hierarchal methodology: First, clinics were randomly sampled formethodology: First, clinics were randomly sampled for the study, then residents visiting those clinics werethe study, then residents visiting those clinics were selected as they entered the clinic on randomly selectedselected as they entered the clinic on randomly selected days during the three summer months of 2010.”days during the three summer months of 2010.”  ““This sampling methodology is designed to beThis sampling methodology is designed to be representative only of those with illness and withrepresentative only of those with illness and with access to the clinic. Thus, the results may notaccess to the clinic. Thus, the results may not adequately represent those ill patients without means ofadequately represent those ill patients without means of access.”access.”
  • 49.
  • 50. Methods:Methods: Hints for PreparationHints for Preparation  Written in past tenseWritten in past tense  Summarize research design from proposal orSummarize research design from proposal or study planstudy plan  Do not need all the detail, just enough forDo not need all the detail, just enough for someone else to replicate the studysomeone else to replicate the study
  • 51. Small Group Exercise 2Small Group Exercise 2  What methodologies were used and do thoseWhat methodologies were used and do those methodologies seem appropriate for themethodologies seem appropriate for the question?question?  Research design, population, independentResearch design, population, independent variables, dependent variablesvariables, dependent variables  How variables measuredHow variables measured  Recommendations to strengthenRecommendations to strengthen methodologies, particularly analysismethodologies, particularly analysis
  • 52. Results:Results: What it DoesWhat it Does  Describes the outcome of the researchDescribes the outcome of the research identified in the introduction and conceptualidentified in the introduction and conceptual framework sectionframework section  Involves a simple reporting of outcomesInvolves a simple reporting of outcomes
  • 53. Results:Results: Hints for PreparationHints for Preparation  May involve two components:May involve two components:  1. description of principal variables1. description of principal variables  2. testing of hypotheses with inferential statistics2. testing of hypotheses with inferential statistics  Focused on the hypotheses or questionsFocused on the hypotheses or questions  Use tables or figures only when neededUse tables or figures only when needed  Do not repeat data or statistics shown in tablesDo not repeat data or statistics shown in tables or figuresor figures  Use past tenseUse past tense
  • 54. Implications/Discussion:Implications/Discussion: What it DoesWhat it Does  Interpret results within the context of theInterpret results within the context of the literature review/conceptual frameworkliterature review/conceptual framework  Discusses relationships between variablesDiscusses relationships between variables  Challenge existing results or theoriesChallenge existing results or theories  Suggest future researchSuggest future research  Describe implications for practiceDescribe implications for practice
  • 55. Implications/Discussion:Implications/Discussion: Hints for PreparationHints for Preparation  Nature of this section varies from journal toNature of this section varies from journal to journaljournal  Refer back to literature and introductionRefer back to literature and introduction  Point out particularly significant results, suchPoint out particularly significant results, such as surprises or inconsistenciesas surprises or inconsistencies  Do not repeat resultsDo not repeat results  Mixture of past and present tenseMixture of past and present tense
  • 56. Conclusion:Conclusion: What it DoesWhat it Does  Provides final summary of research andProvides final summary of research and implicationsimplications  May suggest new research lines resulting fromMay suggest new research lines resulting from Discussion sectionDiscussion section  Describes overall results and implications forDescribes overall results and implications for broader contextbroader context  May suggest a few lines of future researchMay suggest a few lines of future research
  • 57. Conclusion:Conclusion: Hints for PreparationHints for Preparation  Sometimes a separate sectionSometimes a separate section  Usually short; < 300 wordsUsually short; < 300 words
  • 58. Literature CitedLiterature Cited  Ideas, facts, concepts not your own must beIdeas, facts, concepts not your own must be citedcited  Generally, citation is of scientific/technicalGenerally, citation is of scientific/technical articlesarticles  Gray literature versus white literatureGray literature versus white literature  Citation style – see journal guidelinesCitation style – see journal guidelines  Gather literature before writingGather literature before writing  Use citation softwareUse citation software
  • 59. Abstract:Abstract: What it DoesWhat it Does  Single paragraph summarizing researchSingle paragraph summarizing research reportedreported  150-300 words150-300 words  Last component of the paper writtenLast component of the paper written  Note: conferences sometimes differentNote: conferences sometimes different  No cited literature, tables or figuresNo cited literature, tables or figures
  • 60. Tables and FiguresTables and Figures  Basic purpose is to display information that isBasic purpose is to display information that is difficult for a narrativedifficult for a narrative  Information may be:Information may be:  Quantitative statisticsQuantitative statistics  Trends or relationships graphedTrends or relationships graphed  Qualitative data such as quotesQualitative data such as quotes
  • 61.
  • 62.
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  • 64.
  • 65.
  • 66.
  • 67. Tables and FiguresTables and Figures  Keep simpleKeep simple  Independent variables columns (or X axis)Independent variables columns (or X axis)  Dependent variables rows (or Y axis)Dependent variables rows (or Y axis)  Tables explicitly labeled, should stand byTables explicitly labeled, should stand by themselvesthemselves  Consider page size of journalConsider page size of journal
  • 68. Writing and EditingWriting and Editing  Which authors will do whatWhich authors will do what  Clarify rolesClarify roles  Lead author writes initial draftLead author writes initial draft  Authors write various sectionsAuthors write various sections  Create a statement of purpose firstCreate a statement of purpose first  Develop outlineDevelop outline  Use complete sentencesUse complete sentences  Write from outlineWrite from outline
  • 69. Writing and EditingWriting and Editing  Circulate drafts of everythingCirculate drafts of everything  Find non-involved colleague(s) for review orFind non-involved colleague(s) for review or talking throughtalking through  Be familiar with journal requirements (e.g.,Be familiar with journal requirements (e.g., manuscript length, organization, citation style,manuscript length, organization, citation style, etc.)etc.)  May need to get an editor to help withMay need to get an editor to help with language and organizationlanguage and organization
  • 70. Submitting the ManuscriptSubmitting the Manuscript  Invited submissionsInvited submissions  Normal submissionsNormal submissions  Both will go through a review processBoth will go through a review process  Most journals now have online submissionMost journals now have online submission  Manuscript should be written cognizant ofManuscript should be written cognizant of journal audiencejournal audience
  • 71. Submitting the ManuscriptSubmitting the Manuscript  Prior to submission,Prior to submission,  Understand manuscript requirements, e.g., format,Understand manuscript requirements, e.g., format, tables and figures, literature citation method,tables and figures, literature citation method, lengthlength  Carefully review submission process, e.g.,Carefully review submission process, e.g., cover letter, where and how the file iscover letter, where and how the file is uploaded, need for separate files for tables anduploaded, need for separate files for tables and figuresfigures
  • 72. Small Group Exercise 3Small Group Exercise 3  Are the conclusions consistent with the dataAre the conclusions consistent with the data presented?presented?  How did you make your decision?How did you make your decision?  What changes in the conclusion would youWhat changes in the conclusion would you recommend?recommend?
  • 73. The Review ProcessThe Review Process  Can send shudders through your whole body!Can send shudders through your whole body!  Purpose of the review is to ensure the researchPurpose of the review is to ensure the research portrayed has been conductedportrayed has been conducted  AppropriatelyAppropriately  EthicallyEthically  With high standards of professional conductWith high standards of professional conduct  And is originalAnd is original
  • 74. The Review ProcessThe Review Process  Editor assigns Associate EditorEditor assigns Associate Editor  Associate Editor requests two peers,Associate Editor requests two peers, sometimes three, to review manuscriptsometimes three, to review manuscript  Peers read and comment on the paper; theyPeers read and comment on the paper; they may be asked to recommend:may be asked to recommend:  Accept with no revisionsAccept with no revisions  Accept with minor revisionsAccept with minor revisions  Accept with major revisionsAccept with major revisions  RejectionRejection
  • 75. The Review ProcessThe Review Process  Peer or refereedPeer or refereed  Peer – scientists with similar research expertisePeer – scientists with similar research expertise  Refereed – a decision to publish is made byRefereed – a decision to publish is made by someone other than the authorsomeone other than the author  So, most journal articles are technically refereedSo, most journal articles are technically refereed and peer reviewedand peer reviewed
  • 76. Small Group Exercise 4Small Group Exercise 4  How well does the manuscript meet theHow well does the manuscript meet the criteria used for evaluation by the Journal?criteria used for evaluation by the Journal?  What criteria were used?What criteria were used?  How did the ms. meet each of the criteria?How did the ms. meet each of the criteria?  What would be your decision for publicationWhat would be your decision for publication and why?and why?
  • 77. Open, Blind or Double BlindOpen, Blind or Double Blind Review ProcessReview Process  Open review – reviewers and authors namesOpen review – reviewers and authors names are known to each otherare known to each other  Blind – reviewers know who authored theBlind – reviewers know who authored the manuscript they are reviewing, but the authorsmanuscript they are reviewing, but the authors do not know who the reviewers aredo not know who the reviewers are  Double Blind – The names of reviewers andDouble Blind – The names of reviewers and authors are kept confidential; only theauthors are kept confidential; only the associate editor and editor knowassociate editor and editor know
  • 78. Purpose of Blind ReviewsPurpose of Blind Reviews  Objectivity and candidnessObjectivity and candidness  Removes any potential bias resulting fromRemoves any potential bias resulting from interpersonal relationshipsinterpersonal relationships  NegativesNegatives  Sometimes reviews are very, and unnecessarily.Sometimes reviews are very, and unnecessarily. criticalcritical  Most journals use double-blind reviewsMost journals use double-blind reviews  Some journals have an option of a reviewerSome journals have an option of a reviewer letting the author know his or her nameletting the author know his or her name
  • 79. The Review ProcessThe Review Process  Recommendations are based on the journal’sRecommendations are based on the journal’s review criteria and the reviewers’review criteria and the reviewers’ understanding of the scienceunderstanding of the science  Associate Editor reads reviews and manuscriptAssociate Editor reads reviews and manuscript and makes recommendation to editorand makes recommendation to editor  Editor makes decision and notifies authorEditor makes decision and notifies author  Editor lists needed revisionsEditor lists needed revisions
  • 80. The Review ProcessThe Review Process  In many journals, the rejection rate is betweenIn many journals, the rejection rate is between 60 and 80%60 and 80%  Most manuscripts that are accepted areMost manuscripts that are accepted are returned with either a “minor revision” or areturned with either a “minor revision” or a “major revision” recommendation“major revision” recommendation
  • 81. Author’s Response to ReviewsAuthor’s Response to Reviews  For rejected manuscripts:For rejected manuscripts:  Forget itForget it  But better, take into account comments, revise andBut better, take into account comments, revise and submit someplace elsesubmit someplace else  For manuscripts with a revisionFor manuscripts with a revision recommendationrecommendation  Take into account comments and reviseTake into account comments and revise  Resubmit with reconciliation document toResubmit with reconciliation document to show how the comments were addressedshow how the comments were addressed
  • 82. Critique of Peer Review ProcessCritique of Peer Review Process  Slow – may take months, even more than aSlow – may take months, even more than a yearyear  Reviewers may not hold expertiseReviewers may not hold expertise  Non constructive, negative, competitiveNon constructive, negative, competitive commentscomments  Dissenting theories suppressedDissenting theories suppressed
  • 83. Critique of Peer Review ProcessCritique of Peer Review Process  Drummond Rennie, deputy editor ofDrummond Rennie, deputy editor of Journal of the AmericanJournal of the American Medical AssociationMedical Association is an organizer of the Internationalis an organizer of the International Congress on Peer Review and Biomedical Publication, whichCongress on Peer Review and Biomedical Publication, which has been held every four years since 1986.has been held every four years since 1986.[23][23] He remarksHe remarks,,  There seems to be no study too fragmented, no hypothesis too trivial,There seems to be no study too fragmented, no hypothesis too trivial, no literature too biased or too egotistical, no design too warped, nono literature too biased or too egotistical, no design too warped, no methodology too bungled, no presentation of results too inaccurate, toomethodology too bungled, no presentation of results too inaccurate, too obscure, and too contradictory, no analysis too self-serving, noobscure, and too contradictory, no analysis too self-serving, no argument too circular, no conclusions too trifling or too unjustified,argument too circular, no conclusions too trifling or too unjustified, and no grammar and syntax too offensive for a paper to end up in print.and no grammar and syntax too offensive for a paper to end up in print.
  • 84. Critique of Peer Review ProcessCritique of Peer Review Process  Richard Horton, editor of the British medical journalRichard Horton, editor of the British medical journal TheThe LancetLancet, has said that, has said that  The mistake, of course, is to have thought that peer review was anyThe mistake, of course, is to have thought that peer review was any more than a crude means of discovering the acceptability — not themore than a crude means of discovering the acceptability — not the validity — of a new finding. Editors and scientists alike insist on thevalidity — of a new finding. Editors and scientists alike insist on the pivotal importance of peer review. We portray peer review to the publicpivotal importance of peer review. We portray peer review to the public as a quasi-sacred process that helps to make science our most objectiveas a quasi-sacred process that helps to make science our most objective truth teller. But we know that the system of peer review is biased,truth teller. But we know that the system of peer review is biased, unjust, unaccountable, incomplete, easily fixed, often insulting, usuallyunjust, unaccountable, incomplete, easily fixed, often insulting, usually ignorant, occasionally foolish, and frequently wrongignorant, occasionally foolish, and frequently wrong
  • 85. Re-SubmissionRe-Submission  Following revision, the ms is again submittedFollowing revision, the ms is again submitted  Editor makes a preliminary decision aboutEditor makes a preliminary decision about what should be done with the ms.what should be done with the ms.
  • 86. Editor’s DecisionEditor’s Decision  Sometimes revision referred back to AssociateSometimes revision referred back to Associate EditorEditor  Sometimes additional reviews are conductedSometimes additional reviews are conducted  Generally, though if the author has made goodGenerally, though if the author has made good faith effort to revise, the ms. is accepted, butfaith effort to revise, the ms. is accepted, but still may need more revisionstill may need more revision
  • 87. Publication ProcessPublication Process  Following the decision to accept, the ms. isFollowing the decision to accept, the ms. is queued for publicationqueued for publication  This may take several monthsThis may take several months  Once it has been assigned to an issue, a galleyOnce it has been assigned to an issue, a galley proof is madeproof is made  The proof is the mockup of the actual printThe proof is the mockup of the actual print  Author is responsible for quality controlAuthor is responsible for quality control  In some cases, a copy editor will makeIn some cases, a copy editor will make queries to the authorqueries to the author
  • 88. The Publication ProcessThe Publication Process  Such queries mostly deal with grammar,Such queries mostly deal with grammar, citations and figurescitations and figures  Few other changes are permitted at this pointFew other changes are permitted at this point  Following revision of any changes, the authorFollowing revision of any changes, the author approves the galley proofapproves the galley proof  The journal often provides author with orderThe journal often provides author with order form for reprintsform for reprints  Following receipt of galleys, journal putsFollowing receipt of galleys, journal puts ms. in printing queuems. in printing queue
  • 89. PublicationPublication  The ms. appears in the printed publicationThe ms. appears in the printed publication  Author usually receives a few free copies of theAuthor usually receives a few free copies of the journaljournal  Many traditional journals now have earlyMany traditional journals now have early publication on the Web, prior to a physicalpublication on the Web, prior to a physical printprint
  • 90. ConclusionConclusion  That is the A to Z of publicationThat is the A to Z of publication  LessonsLessons  Ms. never perfectMs. never perfect  Think ahead about what story you want to tellThink ahead about what story you want to tell  Tend to methodology early, and in the proposalTend to methodology early, and in the proposal  When reviewing, be constructiveWhen reviewing, be constructive  Now, start writingNow, start writing
  • 91. Thank You Stephen.McCool@umontana.edu Perspectives on Protected Area Planning http://pasqueflowerparadigms.blogspot.com