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2010-2011
2nd Term 2nd Semester
Haemophilus Spp (Blood-loving bacteria)
 H. Influenzae
    Does not cause influenza, Why named so?
      mistakenly considered the cause of influenza 1890 Pandemic.

    Gram negative coccobacilli
    Obligate parasites of man
    Cause hidden disease because:
        Does not cause a specific disease
        Responding first with antibiotics may mask Hib's
        Difficult to isolate
    Fastidious, require X (hemine) and V (NAD or NADP) factors
      in chocolate agar
 A "Rapid Assessment Tool" has been developed by WHO and CDC
  to make sensible estimates of Hib
 H. Ducreyi : STD (soft chancroid) not common
 Opportunistic Haemophilus pathogens are rare
H. Influenza have no
                                               specific syndrome but
                                                     can cause:
                                              meningitis, conjunctivitis,
                                              sinusitis, cellulitis, otitis,
                                              epiglottitis, pneumonia,




Health Canada and www.cdc.gov/vaccines/pubs
One of the most transformable genomes

 H. Influenza was the first free living organism to have the
  complete genome sequenced in 1995
 The genome consists of 1.8 MB of DNA in a single circular
  chromosome of which 1.7 code for proteins.
 How does it become highly-specific to humans?.
    Mutations,Transformable by many ways,
    Phase variation by DNA repeats
Diagnosis
 Microscopy to detect in CSF, synovial fluids,
 Culturing, difficult, may be not sensitive
 latex particle agglutination test (LAT)
 PCR


               H.Influenza Gram stain   H.Influenza Choclate agar
Treatment and prophylaxis
 cefotaxime , ceftriaxone, ampicillin and sulbactam,
  cephalosporins of the second and third generation, or
  fluoroquinolones are preferred.
 Hib conjugate vaccine
 Hib is preventable, but there are two problems:
   A shortage of information : difficult to diagnose, it
    causes death without being recognized
   Expensive: Hib vaccine is expensive
Vibrio
  V. cholerae, and V. parahaemolyticus are human pathogens

V. cholerae: cause cholera. Comma shaped rods , with Two
  circular chromosomes
   What is Cholera? Cholera toxin activates adenyl cyclase causing
     increased cAMP level and hypersecretion of fluids and electrolytes
   Extensive watery diarrhea (15-20 liters/day) called Rice-Water Stool:
        Colorless
        Odorless
        No protein
        Speckled with mucus
 Source contaminated waters and food
 Caused 8 cholera pandemics, example of Pandemic strain is El
  Tor
   Treatment and prevention
   Rehydration & supportive therapy
   Water purification, sanitation & sewage treatment
   Vaccines
Sack, David, et al. 2004. Seminar: Cholera. The Lancet. 363: 223-233.
Diagnosis
 Rapid tests
    Dark-field microscopy
    Rapid immunoassays
    Molecular methods – PCR & DNA probes

 Selective/differential culture medium -
 Thiosulfate Citrate Bile salts Sucrose (TCBS) agar
   V. cholerae grow as yellow colonies

 Biochemical and serological tests
Helicobacter
           H. pylori = gastritis, peptic ulcer
                     disease(PUD)
 Helical (spiral or curved) corkscrew shape and
  lophotrichous (tuft at one pole)flagella helps in
  penetration and colonization of mucosal lining of stomach
  & duodenum
 Acid-inhibitory protein
 Hydrolyzes urea and inhibits acids in gastrics
     • Most gastric cancers are preceded by an infection with
        H. pylori
 Microaerophilic: Change chape to coccoid when exposed to
  oxygen or upon prolonged culture
 Diagnostic aspects
   Detected in endoscopic antral gastric biopsy material
   Culture media containing whole or lysed blood
   Microaerophilic
   does not ferment or oxidize carbohydrates
 Triple Chemotherapy (synergism):
   Proton pump inhibitor (e.g., omeprazole = Prilosec(R))
   One or more antibiotics (e.g., clarithromycin;
    amoxicillin; metronidazole)
   Bismuth compound
Mycobacterium tuberclosis: Tuberclosis 1/3RD of World has it, a
                     global Emergency.
             TB what it is, and how it spreads?
Outside body                            Inside body:
Spreads through the air when a
  person with TB:               bacilli go to lungs and infect alveoli
 Coughs                        Macrophages attack bacteria, but some
                                 survive
 Speaks                        Infected macrophages form tubercles
                                Dead cells form granulomas
 Laughs

 Sneezes

 Sings



                                         http://www.cpmc.columbia.edu/resources/tbcpp/abouttb.html.
Symptoms for Pulmonary TB:
There are many types of Tuberclosis, pulmonary
              is most important
  Perpetual Cough

  Fever

  Weight loss

  Night sweats           Types of TB bacteria include:
                          Mycobacterium tuberculosis
  Loss of appetite
                             Mycobacterium leprae
  Fatigue
                             Mycobacterium avium
  Swollen glands

  Chills

  Pain while breathing
Some diagnostics
 Acid fast staining, and Lowenstein-Jensen Agar
 Skin test- Mantoux test
 Purified Protein Derivative PPD injected in forearm and
  examined 2-3 days later
 Red welt around injection indicates infection
 Examine medical history, x-rays, and sputum
Treatment and prevention
 Take antibiotics for 6-12 months
 Preventative drug to destroy dormant bacteria
 For active TB, 4 medications: isoniazid, rifampin,
  ethambutol, and pyrazinamide
 Vaccines (relatively ineffective today)
 Check with X-ray
Mycobacterium leprae, Leprosy (uncommon)
Spirochetes:
      Treponema, Borrelia, & Leptospira
 Spirochete means “coiled hair” Greek. They are
  tightly coiled like telephone cord, only a fraction of
  a micron in diameter but hundred of microns long
 Twisting Motility by periplasmic flagella (axial
 fibrils or endoflagella) is a major difference
 between this and other bacteria
Spirochaetes: Genus Treponema
 Genus: Treponema: Treponema pallidum, causes syphilis
 (sexually, or congenitally transmitted), delicate obligate parasite
 Stages of Syphilis:
   1. Primary Chancre lesion is the main sign

   2. Secondary rash

   3. Latent , no sign but bacteria present

   4.Tertiary, very complicated systemic

 Treponema pertenue, causes yaws
                                                     skin lesion
Spirochetes
 Genus: Borrelia
   Borrelia burgdorferi,
     Causes a zoonotic vector borne disease called Lyme disease
     Transmitted by ticks
     Linear chromosome

   Borrelia recurrentis, causes relapsing fever
 Genus: Leptospira
   Leptospira species, causes leptospirosis
 Main Diagnostic tests for Spirochetes:
   Darkfield microscopy
   Fluorescent antibody staining
   VDRL
   Wasserman Test
   Hemagglutination tests
Treatment and control
 Penicillin remains drug of choice
   • WHO monitors treatment recommendations
   • 7-10 days continuously for early stage
   • At least 21 days continuously beyond the early
     stage
 Prevention of Mother-child transfer by
  barrier methods (e.g., condoms)
 Prophylactic treatment of contacts identified
  through epidemiological tracing
 Cautiousness, and morals play significant
  roles
Rickettsial Diseases
              Transmitted by Arthropod Vectors
 Fastidious, obligate intracellular bacteria that grow only on
  cells, eggs, and tissue cultures
 Transmitted by Arthropod Vectors
 They are pleomorphic & coccobacillary
 Do not show on Gram stain, but can be seen with either
  Gimenez or Giemsa stains



             Gimenez stain of tissue culture cells
             infected with Rickettsia rickettsii
Rickettsial Diseases
                       1. Spotted Fever Group

                                  Mediterranean spotted fever
 Rocky Mountain spotted fever
                                  – Rickettsia conorii
 – Rickettsia rickettsii
                                  Siberian tick typhus
 Rickettsial pox
                                  – Rickettsia siberica
 – Rickettsia akari
                                  Queensland tick typhus
 Canadian typhus
                                  – Rickettsia australis
 – Rickettsia canada
2. Typhus Group

 Murine typhus
 – Rickettsia mooseri (typhi)
 Epidemic typhus
 – Rickettsia prowazekii
 Scrub typhus
 – Rickettsia tsutsugamushi
3. Others
 Q Fever
 – Coxiella burnetii
 • Ehrlichiosis
 – Ehrlichia canis
 – Ehrlichia equi
 – Ehrlichia chafeensis
 – Several others now identified
Pathogenesis and Clinical Symptoms
 Pathogenesis for all these infections is very similar regardless
  of species. A vasculitis (inflammation of blood vessel wall) is
  caused by the invasion and multiplication of the organism in
  the endothelial and smooth muscle cells of the blood vessels.

Clinical symtoms
 Thrombosis, occlusion, and necrosis of blood vessel walls
 Thrombocytopenia with hemorrhage
   – occurs primarily as a result of platelet consumption as
    opposed to true (DIC)disseminated intravascular coagulation
 Massive capillary leakage, edema, hypotension, and
  respiratory distress, encephalitis, myocarditis, & nephritis
Four Prototype Diseases

 1. Rocky Mountain spotted fever… by Rickettsia rickettsii
    Fever, heache, rash…



 2. Murine typhus…by Rickettsia typhi
 3. Epidemic typhus …by Rickettsia prowazekii
 4. Q fever…by Coxiella burnetii
    Occurs in veterinarians, ranchers, and animal researchers
     from infected placenta of sheep, cattle, or goats (no
     arthropod vector for C. burnetii). Pneumonia is common
Weil-Felix Reaction
           and the bit of a history
 Historical known that Proteus antibodis cross-reactive
  with several of the rickettsiae. Today, Weil-Felix test is not
  confirmed for rickettsial infection.
 In Poland during World War II, two physicians cleverly
  used killed Proteus bacteria to vaccinate the men of a
  small town, to induce a positive Weil-Felix reaction.
 The occupying Germans feared typhus epidemic and Due
  the vaccination reaction, the village was saved of a certain
  destruction. The men were not forced into the army, and
  the women and children were not forced into the camps.
Diagnosis and treatment
Specific & sensitive tests:
    Indirect immunofluorescent antibody (IFA)
    Indirect hemagglutination antibody (IHA)
    Complement fixation (CF)
Treatment
 In life-threatening rickettsial infections, early antibiotic
  intervention is recommended to prevent endothelial damage
 Doxycycline, tetracycline, and chloramphenicol are the drugs
  of choice
Prevention (transmitted by vectors so avoid them)
    Use of repellents & protective clothing in endemic areas
    Inspection & removal of ticks
    Vaccine for RMSF is available for risk groups
    Weekly doxycycline

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2nd term lecture,_,vib,_helico,tb,_spiro,rick[1]

  • 2. Haemophilus Spp (Blood-loving bacteria)  H. Influenzae  Does not cause influenza, Why named so?  mistakenly considered the cause of influenza 1890 Pandemic.  Gram negative coccobacilli  Obligate parasites of man  Cause hidden disease because:  Does not cause a specific disease  Responding first with antibiotics may mask Hib's  Difficult to isolate  Fastidious, require X (hemine) and V (NAD or NADP) factors in chocolate agar  A "Rapid Assessment Tool" has been developed by WHO and CDC to make sensible estimates of Hib  H. Ducreyi : STD (soft chancroid) not common  Opportunistic Haemophilus pathogens are rare
  • 3. H. Influenza have no specific syndrome but can cause: meningitis, conjunctivitis, sinusitis, cellulitis, otitis, epiglottitis, pneumonia, Health Canada and www.cdc.gov/vaccines/pubs
  • 4. One of the most transformable genomes  H. Influenza was the first free living organism to have the complete genome sequenced in 1995  The genome consists of 1.8 MB of DNA in a single circular chromosome of which 1.7 code for proteins.  How does it become highly-specific to humans?.  Mutations,Transformable by many ways,  Phase variation by DNA repeats
  • 5. Diagnosis  Microscopy to detect in CSF, synovial fluids,  Culturing, difficult, may be not sensitive  latex particle agglutination test (LAT)  PCR H.Influenza Gram stain H.Influenza Choclate agar
  • 6. Treatment and prophylaxis  cefotaxime , ceftriaxone, ampicillin and sulbactam, cephalosporins of the second and third generation, or fluoroquinolones are preferred.  Hib conjugate vaccine  Hib is preventable, but there are two problems:  A shortage of information : difficult to diagnose, it causes death without being recognized  Expensive: Hib vaccine is expensive
  • 7. Vibrio V. cholerae, and V. parahaemolyticus are human pathogens V. cholerae: cause cholera. Comma shaped rods , with Two circular chromosomes  What is Cholera? Cholera toxin activates adenyl cyclase causing increased cAMP level and hypersecretion of fluids and electrolytes  Extensive watery diarrhea (15-20 liters/day) called Rice-Water Stool: Colorless Odorless No protein Speckled with mucus  Source contaminated waters and food  Caused 8 cholera pandemics, example of Pandemic strain is El Tor Treatment and prevention Rehydration & supportive therapy Water purification, sanitation & sewage treatment Vaccines
  • 8. Sack, David, et al. 2004. Seminar: Cholera. The Lancet. 363: 223-233.
  • 9. Diagnosis  Rapid tests  Dark-field microscopy  Rapid immunoassays  Molecular methods – PCR & DNA probes  Selective/differential culture medium - Thiosulfate Citrate Bile salts Sucrose (TCBS) agar  V. cholerae grow as yellow colonies  Biochemical and serological tests
  • 10. Helicobacter H. pylori = gastritis, peptic ulcer disease(PUD)  Helical (spiral or curved) corkscrew shape and lophotrichous (tuft at one pole)flagella helps in penetration and colonization of mucosal lining of stomach & duodenum  Acid-inhibitory protein  Hydrolyzes urea and inhibits acids in gastrics • Most gastric cancers are preceded by an infection with H. pylori  Microaerophilic: Change chape to coccoid when exposed to oxygen or upon prolonged culture
  • 11.  Diagnostic aspects  Detected in endoscopic antral gastric biopsy material  Culture media containing whole or lysed blood  Microaerophilic  does not ferment or oxidize carbohydrates  Triple Chemotherapy (synergism):  Proton pump inhibitor (e.g., omeprazole = Prilosec(R))  One or more antibiotics (e.g., clarithromycin; amoxicillin; metronidazole)  Bismuth compound
  • 12. Mycobacterium tuberclosis: Tuberclosis 1/3RD of World has it, a global Emergency. TB what it is, and how it spreads? Outside body Inside body: Spreads through the air when a person with TB:  bacilli go to lungs and infect alveoli  Coughs  Macrophages attack bacteria, but some survive  Speaks  Infected macrophages form tubercles  Dead cells form granulomas  Laughs  Sneezes  Sings http://www.cpmc.columbia.edu/resources/tbcpp/abouttb.html.
  • 13. Symptoms for Pulmonary TB: There are many types of Tuberclosis, pulmonary is most important  Perpetual Cough  Fever  Weight loss  Night sweats Types of TB bacteria include: Mycobacterium tuberculosis  Loss of appetite Mycobacterium leprae  Fatigue Mycobacterium avium  Swollen glands  Chills  Pain while breathing
  • 14. Some diagnostics  Acid fast staining, and Lowenstein-Jensen Agar  Skin test- Mantoux test  Purified Protein Derivative PPD injected in forearm and examined 2-3 days later  Red welt around injection indicates infection  Examine medical history, x-rays, and sputum
  • 15. Treatment and prevention  Take antibiotics for 6-12 months  Preventative drug to destroy dormant bacteria  For active TB, 4 medications: isoniazid, rifampin, ethambutol, and pyrazinamide  Vaccines (relatively ineffective today)  Check with X-ray
  • 17. Spirochetes: Treponema, Borrelia, & Leptospira  Spirochete means “coiled hair” Greek. They are tightly coiled like telephone cord, only a fraction of a micron in diameter but hundred of microns long  Twisting Motility by periplasmic flagella (axial fibrils or endoflagella) is a major difference between this and other bacteria
  • 18. Spirochaetes: Genus Treponema  Genus: Treponema: Treponema pallidum, causes syphilis (sexually, or congenitally transmitted), delicate obligate parasite  Stages of Syphilis:  1. Primary Chancre lesion is the main sign  2. Secondary rash  3. Latent , no sign but bacteria present  4.Tertiary, very complicated systemic  Treponema pertenue, causes yaws skin lesion
  • 19. Spirochetes  Genus: Borrelia  Borrelia burgdorferi,  Causes a zoonotic vector borne disease called Lyme disease  Transmitted by ticks  Linear chromosome  Borrelia recurrentis, causes relapsing fever  Genus: Leptospira  Leptospira species, causes leptospirosis  Main Diagnostic tests for Spirochetes:  Darkfield microscopy  Fluorescent antibody staining  VDRL  Wasserman Test  Hemagglutination tests
  • 20. Treatment and control  Penicillin remains drug of choice • WHO monitors treatment recommendations • 7-10 days continuously for early stage • At least 21 days continuously beyond the early stage  Prevention of Mother-child transfer by barrier methods (e.g., condoms)  Prophylactic treatment of contacts identified through epidemiological tracing  Cautiousness, and morals play significant roles
  • 21. Rickettsial Diseases Transmitted by Arthropod Vectors  Fastidious, obligate intracellular bacteria that grow only on cells, eggs, and tissue cultures  Transmitted by Arthropod Vectors  They are pleomorphic & coccobacillary  Do not show on Gram stain, but can be seen with either Gimenez or Giemsa stains Gimenez stain of tissue culture cells infected with Rickettsia rickettsii
  • 22. Rickettsial Diseases 1. Spotted Fever Group  Mediterranean spotted fever  Rocky Mountain spotted fever  – Rickettsia conorii  – Rickettsia rickettsii  Siberian tick typhus  Rickettsial pox  – Rickettsia siberica  – Rickettsia akari  Queensland tick typhus  Canadian typhus  – Rickettsia australis  – Rickettsia canada
  • 23. 2. Typhus Group  Murine typhus  – Rickettsia mooseri (typhi)  Epidemic typhus  – Rickettsia prowazekii  Scrub typhus  – Rickettsia tsutsugamushi
  • 24. 3. Others  Q Fever  – Coxiella burnetii  • Ehrlichiosis  – Ehrlichia canis  – Ehrlichia equi  – Ehrlichia chafeensis  – Several others now identified
  • 25. Pathogenesis and Clinical Symptoms  Pathogenesis for all these infections is very similar regardless of species. A vasculitis (inflammation of blood vessel wall) is caused by the invasion and multiplication of the organism in the endothelial and smooth muscle cells of the blood vessels. Clinical symtoms  Thrombosis, occlusion, and necrosis of blood vessel walls  Thrombocytopenia with hemorrhage  – occurs primarily as a result of platelet consumption as opposed to true (DIC)disseminated intravascular coagulation  Massive capillary leakage, edema, hypotension, and respiratory distress, encephalitis, myocarditis, & nephritis
  • 26. Four Prototype Diseases  1. Rocky Mountain spotted fever… by Rickettsia rickettsii  Fever, heache, rash…  2. Murine typhus…by Rickettsia typhi  3. Epidemic typhus …by Rickettsia prowazekii  4. Q fever…by Coxiella burnetii  Occurs in veterinarians, ranchers, and animal researchers from infected placenta of sheep, cattle, or goats (no arthropod vector for C. burnetii). Pneumonia is common
  • 27. Weil-Felix Reaction and the bit of a history  Historical known that Proteus antibodis cross-reactive with several of the rickettsiae. Today, Weil-Felix test is not confirmed for rickettsial infection.  In Poland during World War II, two physicians cleverly used killed Proteus bacteria to vaccinate the men of a small town, to induce a positive Weil-Felix reaction.  The occupying Germans feared typhus epidemic and Due the vaccination reaction, the village was saved of a certain destruction. The men were not forced into the army, and the women and children were not forced into the camps.
  • 28. Diagnosis and treatment Specific & sensitive tests:  Indirect immunofluorescent antibody (IFA)  Indirect hemagglutination antibody (IHA)  Complement fixation (CF) Treatment  In life-threatening rickettsial infections, early antibiotic intervention is recommended to prevent endothelial damage  Doxycycline, tetracycline, and chloramphenicol are the drugs of choice Prevention (transmitted by vectors so avoid them)  Use of repellents & protective clothing in endemic areas  Inspection & removal of ticks  Vaccine for RMSF is available for risk groups  Weekly doxycycline