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COTE Fellow Chat
Community of Practice
1
2
Learn More:
http://commons.suny.edu/c
ote/
Join:
http://commons.suny.edu/co
te/join-community-of-
practice/
3 Submit a Proposal:
http://bit.ly/COTEproposal
Jim Greenberg, Director TLTC
Director, Teaching Learning Technology Center
SUNY Oneonta
Open SUNY Fellow Role:
Innovator and/ or Researcher
Topic:
A Virtual Infrastructure for Data intensive
Analysis (VIDIA)
Theme:
Research & Innovation
COTE NOTE: http://bit.ly/cotenotevidia
Providing Undergraduates with a
Virtual Infrastructure for Data
Intensive Analysis
• Jeanette Sperhac and Steven M. Gallo
• SUNY Buffalo
• Brian Lowe and Jim Greenberg
• SUNY Oneonta
The VIDIA Team:
Gregory Fulkerson, Ph.D.
Assistant Professor of Sociology
James Greenberg
Director, TLTC
Brett Heindl, Ph.D.
Assistant Professor of
Political Science
Achim Koeddermann, Ph.D.
Associate Professor of
Philosophy and Env.
SciencesBrian M. Lowe,
Ph.D.
Associate Professor
of SociologyDiana Moseman
Instructional
Designer/Programmer
TLTC
Harry Pence, Ph.D.
Distinguished Professor of
Chemistry
Tim Ploss
Instructional Designer
Bill Wilkerson, Ph.D.
Associate Professor of Political
Science
Steven M. Gallo
Lead Software Engineer
CCR, University at BuffaloJeanette Sperhac
Scientific Programmer
CCR, University at Buffalo
Adopting social media analysis at
Oneonta
 Social Sciences approached Oneonta IT to build an
analysis environment
 The needed resources did not exist in house
 IITG connected Oneonta with CCR
Case Study: Society and Animals
 200 level Sociology course; social science majors
without formal programming training
 Comparative/historical, social scientific, journalistic
 Goal: students gather, organize and interpret mined
social media
Project Goals
 Achieving critical thinking through engaging texts
 Deploying ideas from texts in new directions
 Applying theoretical perspectives and concepts
 Achieving student engagement through data-driven
research
Collaboration Goals
 Create a social sciences big data discovery
environment
 Support social science teaching and research
 Leverage High Performance Computing (HPC)
resources
 Support coursework at Oneonta, Spring 2014
Introducing VIDIA
• Virtual Infrastructure
• for Data Intensive Analysis
VIDIA
• Deployed using Purdue's HUBzero platform:
 Provide workflow tools for data analysis
 Offer access to computing resources
 Curate large datasets of social scientific
interest
Data Mining Workflow Tools
 Graphical User Interface
 Powerful, easy to use
 Open source, extensible
Dataset Access
• Curate Big Data for social science:
 Social data: Twitter feeds, etc.
 Partnerships with social dataset providers
 Enable students to capture own data
HUBzero Platform
• Open source platform offers:
 Access via web browser
 Computation, collaboration, software tool development
 Simplified access to remote HPC resources
 Upload and sharing of course
materials
 And more...
Teaching on HUBzero
 Unified platform for coursework
 Easy on IT staff:
 Obviates software installs on individual student workstations
 Access anytime, anywhere
 Resources can be selectively secured
 Students may access resources after course conclusion
User Dashboard
Collaborative Features
• Any registered user can
manage and control access
to their own:
 Groups: assemble users with common
interests
 Projects: assemble resources for a common
goal
 Tools: development, deployment, simulations
Groups
• HUBzero groups can:
 Control access to resources
 Share and distribute content
 Allow users with common interests to associate
• Any registered user may create a group
Resources
Deployed Tool
• Orange Data Mining Tool
Computing Environment
User's Workstation
(web browser)
HUBzero server
Data storage
Cluster
resources
VIDIA Hardware
• HUBzero and webserver: Dell PowerEdge R720xd
 2x 6-core Intel Xeon E5-2630 (2.30 GHz, 15M cache)
 48 TB raw (~36 TB usable) SATA disk space
 128 GB memory (16x8GB - 1333MHz DIMMS)
• Analysis: 4x Dell PowerEdge R520
 6-core Intel Xeon E5-2430 (2.20 GHz, 15M cache)
 4.8 TB raw (~4 TB usable) SAS disk space
 96 GB memory (6x16GB - 1600MHz DIMMS)
VIDIA: Spring 2014
 Supported three SUNY Oneonta courses
 Deployed three data analysis tools
 76 student users registered (themselves!)
 Assigned student tasks:
 k-Means Clustering
 Word Co-Occurrences
 Enabled 25+ simultaneous tool sessions
RapidMiner Sessions
Month Tool Users Tool Sessions
Run
Tool Walltime Tool CPU Time
April 2014 77 568 41.7 days 21.7 hours
May 2014
(as of 8 May)
80 849 61.0 days 23.7 hours
on VIDIA
Challenges
 User training: learning the platform and tools
 Technical performance details
 HUBzero updates
 Browser compatibility
 Dataset acquisition
What's next?
 SUNY Oneonta coursework, Fall 2014
 Deploy additional data mining tools
 Integrate HUBzero collaboration features
 Roll out to other SUNY comprehensive colleges
(Discussion underway with SUNY Brockport)
Thank You!
Join the SUNY Learning Commons
http:///commons.suny.edu for access to the COTE Community group to continue the
conversation!
View a Recording of today’s Fellow Chat:
http://bit.ly/COTEfellowchatRECORDING
View the COTE NOTE:
http://bit.ly/cotenotevidia
Become an Open SUNY Fellow:
http://bit.ly/joinCOTE
Submit a Proposal:
http://bit.ly/COTEproposal
Next Fellow Chat
Open SUNY Fellow:
Rhianna Rogers, Assistant Professor, SUNY Empire
State College
Open SUNY Fellow Role:
Innovator or Researcher
Topic:
Fostering Creativity in Learning: How to Effectively
Incorporate OERs into Assignments
Date:
Thursday August 7 & 14, 2014 12:00 PM
Register: http://www.cvent.com/d/t4qdfw

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A Virtual Infrastructure for Data intensive Analysis (VIDIA)

  • 2. Community of Practice 1 2 Learn More: http://commons.suny.edu/c ote/ Join: http://commons.suny.edu/co te/join-community-of- practice/ 3 Submit a Proposal: http://bit.ly/COTEproposal
  • 3. Jim Greenberg, Director TLTC Director, Teaching Learning Technology Center SUNY Oneonta Open SUNY Fellow Role: Innovator and/ or Researcher Topic: A Virtual Infrastructure for Data intensive Analysis (VIDIA) Theme: Research & Innovation COTE NOTE: http://bit.ly/cotenotevidia
  • 4. Providing Undergraduates with a Virtual Infrastructure for Data Intensive Analysis • Jeanette Sperhac and Steven M. Gallo • SUNY Buffalo • Brian Lowe and Jim Greenberg • SUNY Oneonta
  • 5. The VIDIA Team: Gregory Fulkerson, Ph.D. Assistant Professor of Sociology James Greenberg Director, TLTC Brett Heindl, Ph.D. Assistant Professor of Political Science Achim Koeddermann, Ph.D. Associate Professor of Philosophy and Env. SciencesBrian M. Lowe, Ph.D. Associate Professor of SociologyDiana Moseman Instructional Designer/Programmer TLTC Harry Pence, Ph.D. Distinguished Professor of Chemistry Tim Ploss Instructional Designer Bill Wilkerson, Ph.D. Associate Professor of Political Science Steven M. Gallo Lead Software Engineer CCR, University at BuffaloJeanette Sperhac Scientific Programmer CCR, University at Buffalo
  • 6. Adopting social media analysis at Oneonta  Social Sciences approached Oneonta IT to build an analysis environment  The needed resources did not exist in house  IITG connected Oneonta with CCR
  • 7. Case Study: Society and Animals  200 level Sociology course; social science majors without formal programming training  Comparative/historical, social scientific, journalistic  Goal: students gather, organize and interpret mined social media
  • 8. Project Goals  Achieving critical thinking through engaging texts  Deploying ideas from texts in new directions  Applying theoretical perspectives and concepts  Achieving student engagement through data-driven research
  • 9.
  • 10.
  • 11. Collaboration Goals  Create a social sciences big data discovery environment  Support social science teaching and research  Leverage High Performance Computing (HPC) resources  Support coursework at Oneonta, Spring 2014
  • 12. Introducing VIDIA • Virtual Infrastructure • for Data Intensive Analysis
  • 13. VIDIA • Deployed using Purdue's HUBzero platform:  Provide workflow tools for data analysis  Offer access to computing resources  Curate large datasets of social scientific interest
  • 14. Data Mining Workflow Tools  Graphical User Interface  Powerful, easy to use  Open source, extensible
  • 15. Dataset Access • Curate Big Data for social science:  Social data: Twitter feeds, etc.  Partnerships with social dataset providers  Enable students to capture own data
  • 16. HUBzero Platform • Open source platform offers:  Access via web browser  Computation, collaboration, software tool development  Simplified access to remote HPC resources  Upload and sharing of course materials  And more...
  • 17.
  • 18. Teaching on HUBzero  Unified platform for coursework  Easy on IT staff:  Obviates software installs on individual student workstations  Access anytime, anywhere  Resources can be selectively secured  Students may access resources after course conclusion
  • 20. Collaborative Features • Any registered user can manage and control access to their own:  Groups: assemble users with common interests  Projects: assemble resources for a common goal  Tools: development, deployment, simulations
  • 21. Groups • HUBzero groups can:  Control access to resources  Share and distribute content  Allow users with common interests to associate • Any registered user may create a group
  • 23. Deployed Tool • Orange Data Mining Tool
  • 24.
  • 25. Computing Environment User's Workstation (web browser) HUBzero server Data storage Cluster resources
  • 26. VIDIA Hardware • HUBzero and webserver: Dell PowerEdge R720xd  2x 6-core Intel Xeon E5-2630 (2.30 GHz, 15M cache)  48 TB raw (~36 TB usable) SATA disk space  128 GB memory (16x8GB - 1333MHz DIMMS) • Analysis: 4x Dell PowerEdge R520  6-core Intel Xeon E5-2430 (2.20 GHz, 15M cache)  4.8 TB raw (~4 TB usable) SAS disk space  96 GB memory (6x16GB - 1600MHz DIMMS)
  • 27. VIDIA: Spring 2014  Supported three SUNY Oneonta courses  Deployed three data analysis tools  76 student users registered (themselves!)  Assigned student tasks:  k-Means Clustering  Word Co-Occurrences  Enabled 25+ simultaneous tool sessions
  • 28. RapidMiner Sessions Month Tool Users Tool Sessions Run Tool Walltime Tool CPU Time April 2014 77 568 41.7 days 21.7 hours May 2014 (as of 8 May) 80 849 61.0 days 23.7 hours on VIDIA
  • 29. Challenges  User training: learning the platform and tools  Technical performance details  HUBzero updates  Browser compatibility  Dataset acquisition
  • 30. What's next?  SUNY Oneonta coursework, Fall 2014  Deploy additional data mining tools  Integrate HUBzero collaboration features  Roll out to other SUNY comprehensive colleges (Discussion underway with SUNY Brockport)
  • 31.
  • 32. Thank You! Join the SUNY Learning Commons http:///commons.suny.edu for access to the COTE Community group to continue the conversation! View a Recording of today’s Fellow Chat: http://bit.ly/COTEfellowchatRECORDING View the COTE NOTE: http://bit.ly/cotenotevidia Become an Open SUNY Fellow: http://bit.ly/joinCOTE Submit a Proposal: http://bit.ly/COTEproposal
  • 33. Next Fellow Chat Open SUNY Fellow: Rhianna Rogers, Assistant Professor, SUNY Empire State College Open SUNY Fellow Role: Innovator or Researcher Topic: Fostering Creativity in Learning: How to Effectively Incorporate OERs into Assignments Date: Thursday August 7 & 14, 2014 12:00 PM Register: http://www.cvent.com/d/t4qdfw