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The MIT Consortium on Adventitious Agent
   Contamination in Biomanufacturing

            Michael E. Wiebe, Ph.D.
            Quantum Consulting
Purpose of the Consortium



To combine the knowledge, experience and
resources of companies that manufacture, or
support the manufacture of biopharmaceuticals
or vaccines, to identify best practices and
technologies that control and mitigate the risk of
contamination of biomanufacturing processes by
adventitious agents.



                      2
Consortium Goals

●   To provide a collaborative environment for companies to
    share their experiences
●   To provide a forum for companies to network, develop
    collaborations and synergize
●   To identify best industry practices, and to provide
    opportunities for companies to benchmark
●   To sponsor collaborative research activities and
    initiatives that promote a better understanding of how to
    address adventitious agent contamination.
●   To promote the generation and application of new
    technologies
●   To make public a summary of consortium findings and
    recommendations.
                              3
Key Components of Consortium

Consortium Operations & Management                                  Fee-based Membership
●MIT   CAACB Team                                          ●   Full Members
   ●   Program Director: Dr. Stacy Springs                     ●   Manufacture Biologics
   ●   Lead Investigators: Michael Wiebe and James
       Leung
                                                               ●   Steering Committee
                                                                   representation
   ●   MIT Faculty Investigator: Anthony J. Sinskey
   ●   MIT Faculty & Staff: As Needed Per Consortium
                                                               ●   Active participants in all
       Projects                                                    consortium projects including data
                                                                   contribution, results interpretation
●Steering   Committee                                              and report generation
   ●   One individual from each member company

●Advisory
                                                           ●   Associate Members
             Board
   ●   Kurt Brorson, FDA (CDER)
                                                               ●   Do not manufacture Biologics (e.g.
   ●   Marshall Dinowitz, Consultant                               Service Providers & Technology
   ●   Jim Gombold, Charles River Laboratories                     Companies)
   ●   Bill Lucas, WuXi AppTec                                 ●   Active participants in projects
   ●   Ray Nims, Consultant                                        focusing on technologies and
       Carol Marcus-Sekura, Consultant
   ●
                                                                   methods assessments &
   ●   Anton Steuer, BioReliance
                                                                   development, roles to be defined
   ●   Hannelore Willkommen, Consultant
   ●   Ruth Wolff, Consultant


                                                       4
Consortium Member Companies




            5
Consortium Activities
Consortium Activities                          Purposes                                Participants

                        •To provide company information under NDAs on
                        adventitious agent contamination events, preventive
 Information Sharing    actions and risk mitigation strategies
                                                                                    Member Companies
       Projects         •To identify best practices to prevent adventitious agent
                        contamination from the analysis of consolidated industry
                        data
                        •To sponsor targeted research projects that lead to
  Sponsor Targeted                                                                  Member Companies
                        better control practices, or new technologies that
  Research Projects
                        mitigate risk of adventitious agent contamination
                        •To learn of advances in selected technology areas
                        •To contribute to the understanding of anonymous data       Delegates of Member
Consortium Workshops
                        collected from CAACB projects                               Companies, Invited
     & Symposia
                        •To exchange ideas, experience and knowhow of               MIT faculty
                        industry practices
                        •To report progress and future plans of CAACB to
                                                                                    Delegates of Member
 Consortium General     consortium body
                                                                                    Companies, Invited
     Meetings           •To highlight technology advances and policy changes
                                                                                    guests
                        relevant to mission of CAACB

Consortium Sponsored
                        •Forum to promote CAACB mission                             Public
      Meetings
                                                 6
Consortium Benefits to Member Companies

●   Learning from industry-wide experience and solutions, as compared to only
    learning from your company’s experience
●   Benchmarking your adventitious agent contamination strategy against best industry
    practice
●   Networking and establishing collaborations with individuals in other companies, to
    address similar adventitious agent issues and solutions
●   Learning first-hand how others have addressed adventitious agent contaminations,
    decontaminated facilities and implemented corrective and preventive actions.
●   Learning of cutting edge technologies that can be applied to virus testing and
    contamination risk reduction, and providing guidance to technology providers as to
    when new technology applications are ready for implementation.
●   Identification of best strategies to obtain regulatory approval for testing and
    process changes.
●   Sharing best approaches to making risk-based management decisions for
    implementation of improvements (or corrective actions) to mitigate low risk, high
    impact events.
●   Promotion of higher industry standards through consortium recommendations to
    implement scientifically reasonable and beneficial testing and process
    improvements, without being compelled to implement low value and potentially
    burdensome changes.
                                          7
Overview of Inaugural Project




 The Collection and Analysis of Virus
Contamination Data in Biomanufacturing




                  8
Virus Safety Record
            in Biopharmaceutical Manufacturing

●   No rDNA derived product has been shown to transmit a viral safety
    problem in 25+ years of biopharmaceutical manufacturing.
●   This can largely be attributed to lessons learned from the past history of
    biologics manufacturing, and the implementation of a comprehensive
    multifaceted approach to prevention and control.
     ●   Master Cell Bank testing
     ●   Raw material testing & source control
     ●   Closed manufacturing systems; Unidirectional flow
     ●   Identification of viruses that replicate in the engineered cell substrate
     ●   Lot by lot virus testing
     ●   Downstream processes for virus clearance; Separation or pre- and post-
         virus clearance steps
●   However, we know that adventitious viruses have contaminated cell
    culture biomanufacturing operations.

                                           9
Virus Contaminations: An Industry-Wide Issue
    Virus             Cell        Year      Company          Reported By
    EHDV             CHO          1988    Bioferon GmbH     Bioferon GmbH
    MMV              CHO          1993      Genentech         Genentech
    MMV              CHO          1994      Genentech         Genentech
   Reovirus      Human 1˚Kidney   1999     Abbott Labs           FDA
   Reovirus          CHO           ?             ?            BioReliance
Cache Valley         CHO          1999    Amgen / CMO           Amgen
Cache Valley         CHO          2000           ?            BioReliance
Vesivirus 2117       CHO          2003     Boehringer-        Boehringer-
                                            Ingelheim          Ingelheim
Cache Valley         CHO          2003          ?             BioReliance
Cache Valley         CHO          2004           ?            BioReliance
Hu Adenovirus       HEK 293        ?          Eli Lilly         Eli Lilly
    MMV              CHO          2006        Amgen             Amgen
Vesivirus 2117       CHO          2008   Genzyme, Belgium      Genzyme
Vesivirus 2117       CHO          2008    Genzyme, USA         Genzyme
Vesivirus 2117       CHO          2009    Genzyme, USA         Genzyme
    MMV              CHO          2009      Merrimack         Merrimack
   PCV-1             Vero         2010   GlaxoSmithKline    GlaxoSmithKline
                                   10
Premise of Consortium Inaugural Project



The confidential collection of industry-
wide viral contamination data and a
subsequent risk analysis assessment would
be a highly valuable “lessons learned”
exercise for industry, and could guide
companies in best practices to mitigate the
risks that lead to these events.

                    11
Potential Impact of Virus Contaminations


●   Potential Issue For Patient     ●   Requires Development Of
    Safety                              Comprehensive Plan For
●   Production Shutdown                 Corrective And Preventive
                                        Actions
●   Product Stock Out               ●   Manufacturing Plant
●   Lost Product And Lost Sales         Decontamination
●   Expense Of The                  ●   Encourages The Competition
    Comprehensive Investigation
    Required                        ●   Complicates Partnerships
                                        And Contractual Agreements
●   Delay In Product Approval       ●   Exposes Company To
●   Exposes Company To Intense          Lawsuits
    Regulatory Scrutiny             ●   Diverts Focus Of Company
●   Changes Public Perception Of        Leadership
    Product Quality

                               12
Virus Contaminations: Company’s Have Learned
  Primarily From Their Contamination Event(s)


●   Many companies have not publically disclosed virus contamination
    events
     ●   No obligation to disclose unless the contamination results in a “material
         change” to the business
     ●   Motivated by concerns for negative publicity.
     ●   This is well known in the industry.
     ●   Some companies do not notify regulatory authorities
●   Companies that have disclosed rarely describe the event in sufficient
    detail to be of significant value

                  lack of industry wide knowledge
●   Companies are only really able to learn from their own contamination
    events.


                                           13
Potential Value of Industry-wide
               “Lessons Learned” Exercise
●   Identification Of Industry Risks
    ●   Which viruses have contaminated operations?
    ●   What virus sources have been identified?
    ●   What are the most likely process breaches?
    ●   Which cell lines are most likely to be contaminated?
    ●   Do some process designs have higher risk? (batch vs. perfusion)
●   Identification of effective barriers
    ●   Is there value in raw material testing?
    ●   Has the elimination of animal derived raw materials lowered the
        frequency of virus contamination?
    ●   How effective are procedures used to inactivate virus in cell culture
        media before use?
    ●   Is there value in using molecular virus detection methods for in-process
        testing?
●   Shared information could save industry millions of dollars
    and prevent a potential patient safety catastrophe.

                                        14
Confidential Information Is Protected

                Consortium Information Domain
     General
                                                Steering                            Advisory
     Member
         General                               Committee                             Board
 (Data Contributor)
         Member
              General
     (Data Contributor)
              Member
                    General
         (Data Contributor)
                    Member
                        General
               (Data Contributor)
                        Member
                   (Data Contributor)                                                          Deliverables Available to
                                                                                                   CAACB Members
                                              MIT CBI/CAACB Team



                                         Project       Data Management
                                          Data
                                        Collection         Data Analysis:
                                        & Coding           Trend & Risk
                                                           Analysis, etc.
                 Associate
                  Member
              Associate
                                                                              Preview, Review
               Member
          Associate                                                         Authorize by Steering
           Member
       Associate                                 Confidentiality                 Committee
        Member
   Associate                                     Barrier & Filter
    Member
Associate
Member
                                                                                         Public Reports      Public Presentations
                                                                                       Summary of Findings   Summary of Findings


                                                      15
Initial List of Information to Collect

●   Virus Identification
●   Method of Virus Detection & Identification
●   Experience with False Positive Tests
●   Investigation Organization & Management
●   Communication with Regulatory Authorities; others
●   Cell Line Contaminated
●   Extent of Contamination                             All data will remain
●   Source of Contamination                             confidential via NDAs
●   Process Breach Identification                       between companies
●   Frequency of Contamination
●   Raw Material Treatment & Control System
                                                        and MIT
●   Process Controls
●   Methods of Decontamination
●   Corrective Actions; Restart
●   Preventive Actions
●   Lessons Learned
●   Success of Actions Taken
                                         16
Project Goals

1.   Collect and analyze consortium member virus
     contamination data (if experienced by member)
2.   Compile processed data into a searchable
     database with access for members while
     maintaining confidentiality
3.   Uncover any new risk factors for contamination
4.   Determine best industry practice to mitigate risk
5.   Identify technology gaps for further R&D
6.   Publish summary of key findings from the project

                          17
Project Stages & Proposed Timeline
Project Stage                                               Target Completion
Develop data collection instrument, questionnaire, and          Complete
process
Raw data collection from participating members & partners      In Progress
Anonymous data pooling, annotated and collated                    2012
Preliminary report to member companies                            2012
Analysis of processed data; Interpretation from CAACB             2012
forum (MIT Team & Industry Member Companies)
Full research report to member companies; to include all          2013
methods, data analyses, findings, recommendations
Publication of Research Summary Report: Major findings &         2013+
recommendations
Continuous Updates & Expansion of Data: Collection &             2013+
Analysis
                                       18
2012 Consortium Workshops

●   Media Treatment Workshop
    ●   Sharing of experience with HTST, UV-C, nanofiltration and other methods of
        virus inactivation or removal
    ●   Where – MIT, Cambridge, MA
    ●   When – June 21 & 22, 2012
    ●   Open to Consortium member company participants and invited speakers


●   Virus Contamination Project Workshop
    ●   Currently in planning phase
    ●   To present early draft of collected data; to solicit input on data interpretation
    ●   When – Q4, 2012
    ●   Open to Consortium member data contributors



                                           19
How to Join

● Written information to be sent for review and
  discussion with colleagues and management
● Teleconference and/or company visit with
  Consortium Staff
● Consortium agreement and membership fee

● Company representatives to steering committee
  determined




                       20
Contact Us


             ●   Consortium Executive Director
                 Dr. Stacy Springs
                 email: ssprings@mit.edu
                 Tel: 1-617-253-3084

●   Lead investigators

    Dr. Michael Wiebe               Dr. James Leung
    email: quantumco@comcast.net    email: leungjc@mit.edu
    Tel: 1-650-365-7022             Tel: 1-781-333-8822


                             21

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MIT Consortium Collects Biomanufacturing Virus Contamination Data

  • 1. The MIT Consortium on Adventitious Agent Contamination in Biomanufacturing Michael E. Wiebe, Ph.D. Quantum Consulting
  • 2. Purpose of the Consortium To combine the knowledge, experience and resources of companies that manufacture, or support the manufacture of biopharmaceuticals or vaccines, to identify best practices and technologies that control and mitigate the risk of contamination of biomanufacturing processes by adventitious agents. 2
  • 3. Consortium Goals ● To provide a collaborative environment for companies to share their experiences ● To provide a forum for companies to network, develop collaborations and synergize ● To identify best industry practices, and to provide opportunities for companies to benchmark ● To sponsor collaborative research activities and initiatives that promote a better understanding of how to address adventitious agent contamination. ● To promote the generation and application of new technologies ● To make public a summary of consortium findings and recommendations. 3
  • 4. Key Components of Consortium Consortium Operations & Management Fee-based Membership ●MIT CAACB Team ● Full Members ● Program Director: Dr. Stacy Springs ● Manufacture Biologics ● Lead Investigators: Michael Wiebe and James Leung ● Steering Committee representation ● MIT Faculty Investigator: Anthony J. Sinskey ● MIT Faculty & Staff: As Needed Per Consortium ● Active participants in all Projects consortium projects including data contribution, results interpretation ●Steering Committee and report generation ● One individual from each member company ●Advisory ● Associate Members Board ● Kurt Brorson, FDA (CDER) ● Do not manufacture Biologics (e.g. ● Marshall Dinowitz, Consultant Service Providers & Technology ● Jim Gombold, Charles River Laboratories Companies) ● Bill Lucas, WuXi AppTec ● Active participants in projects ● Ray Nims, Consultant focusing on technologies and Carol Marcus-Sekura, Consultant ● methods assessments & ● Anton Steuer, BioReliance development, roles to be defined ● Hannelore Willkommen, Consultant ● Ruth Wolff, Consultant 4
  • 6. Consortium Activities Consortium Activities Purposes Participants •To provide company information under NDAs on adventitious agent contamination events, preventive Information Sharing actions and risk mitigation strategies Member Companies Projects •To identify best practices to prevent adventitious agent contamination from the analysis of consolidated industry data •To sponsor targeted research projects that lead to Sponsor Targeted Member Companies better control practices, or new technologies that Research Projects mitigate risk of adventitious agent contamination •To learn of advances in selected technology areas •To contribute to the understanding of anonymous data Delegates of Member Consortium Workshops collected from CAACB projects Companies, Invited & Symposia •To exchange ideas, experience and knowhow of MIT faculty industry practices •To report progress and future plans of CAACB to Delegates of Member Consortium General consortium body Companies, Invited Meetings •To highlight technology advances and policy changes guests relevant to mission of CAACB Consortium Sponsored •Forum to promote CAACB mission Public Meetings 6
  • 7. Consortium Benefits to Member Companies ● Learning from industry-wide experience and solutions, as compared to only learning from your company’s experience ● Benchmarking your adventitious agent contamination strategy against best industry practice ● Networking and establishing collaborations with individuals in other companies, to address similar adventitious agent issues and solutions ● Learning first-hand how others have addressed adventitious agent contaminations, decontaminated facilities and implemented corrective and preventive actions. ● Learning of cutting edge technologies that can be applied to virus testing and contamination risk reduction, and providing guidance to technology providers as to when new technology applications are ready for implementation. ● Identification of best strategies to obtain regulatory approval for testing and process changes. ● Sharing best approaches to making risk-based management decisions for implementation of improvements (or corrective actions) to mitigate low risk, high impact events. ● Promotion of higher industry standards through consortium recommendations to implement scientifically reasonable and beneficial testing and process improvements, without being compelled to implement low value and potentially burdensome changes. 7
  • 8. Overview of Inaugural Project The Collection and Analysis of Virus Contamination Data in Biomanufacturing 8
  • 9. Virus Safety Record in Biopharmaceutical Manufacturing ● No rDNA derived product has been shown to transmit a viral safety problem in 25+ years of biopharmaceutical manufacturing. ● This can largely be attributed to lessons learned from the past history of biologics manufacturing, and the implementation of a comprehensive multifaceted approach to prevention and control. ● Master Cell Bank testing ● Raw material testing & source control ● Closed manufacturing systems; Unidirectional flow ● Identification of viruses that replicate in the engineered cell substrate ● Lot by lot virus testing ● Downstream processes for virus clearance; Separation or pre- and post- virus clearance steps ● However, we know that adventitious viruses have contaminated cell culture biomanufacturing operations. 9
  • 10. Virus Contaminations: An Industry-Wide Issue Virus Cell Year Company Reported By EHDV CHO 1988 Bioferon GmbH Bioferon GmbH MMV CHO 1993 Genentech Genentech MMV CHO 1994 Genentech Genentech Reovirus Human 1˚Kidney 1999 Abbott Labs FDA Reovirus CHO ? ? BioReliance Cache Valley CHO 1999 Amgen / CMO Amgen Cache Valley CHO 2000 ? BioReliance Vesivirus 2117 CHO 2003 Boehringer- Boehringer- Ingelheim Ingelheim Cache Valley CHO 2003 ? BioReliance Cache Valley CHO 2004 ? BioReliance Hu Adenovirus HEK 293 ? Eli Lilly Eli Lilly MMV CHO 2006 Amgen Amgen Vesivirus 2117 CHO 2008 Genzyme, Belgium Genzyme Vesivirus 2117 CHO 2008 Genzyme, USA Genzyme Vesivirus 2117 CHO 2009 Genzyme, USA Genzyme MMV CHO 2009 Merrimack Merrimack PCV-1 Vero 2010 GlaxoSmithKline GlaxoSmithKline 10
  • 11. Premise of Consortium Inaugural Project The confidential collection of industry- wide viral contamination data and a subsequent risk analysis assessment would be a highly valuable “lessons learned” exercise for industry, and could guide companies in best practices to mitigate the risks that lead to these events. 11
  • 12. Potential Impact of Virus Contaminations ● Potential Issue For Patient ● Requires Development Of Safety Comprehensive Plan For ● Production Shutdown Corrective And Preventive Actions ● Product Stock Out ● Manufacturing Plant ● Lost Product And Lost Sales Decontamination ● Expense Of The ● Encourages The Competition Comprehensive Investigation Required ● Complicates Partnerships And Contractual Agreements ● Delay In Product Approval ● Exposes Company To ● Exposes Company To Intense Lawsuits Regulatory Scrutiny ● Diverts Focus Of Company ● Changes Public Perception Of Leadership Product Quality 12
  • 13. Virus Contaminations: Company’s Have Learned Primarily From Their Contamination Event(s) ● Many companies have not publically disclosed virus contamination events ● No obligation to disclose unless the contamination results in a “material change” to the business ● Motivated by concerns for negative publicity. ● This is well known in the industry. ● Some companies do not notify regulatory authorities ● Companies that have disclosed rarely describe the event in sufficient detail to be of significant value lack of industry wide knowledge ● Companies are only really able to learn from their own contamination events. 13
  • 14. Potential Value of Industry-wide “Lessons Learned” Exercise ● Identification Of Industry Risks ● Which viruses have contaminated operations? ● What virus sources have been identified? ● What are the most likely process breaches? ● Which cell lines are most likely to be contaminated? ● Do some process designs have higher risk? (batch vs. perfusion) ● Identification of effective barriers ● Is there value in raw material testing? ● Has the elimination of animal derived raw materials lowered the frequency of virus contamination? ● How effective are procedures used to inactivate virus in cell culture media before use? ● Is there value in using molecular virus detection methods for in-process testing? ● Shared information could save industry millions of dollars and prevent a potential patient safety catastrophe. 14
  • 15. Confidential Information Is Protected Consortium Information Domain General Steering Advisory Member General Committee Board (Data Contributor) Member General (Data Contributor) Member General (Data Contributor) Member General (Data Contributor) Member (Data Contributor) Deliverables Available to CAACB Members MIT CBI/CAACB Team Project Data Management Data Collection Data Analysis: & Coding Trend & Risk Analysis, etc. Associate Member Associate Preview, Review Member Associate Authorize by Steering Member Associate Confidentiality Committee Member Associate Barrier & Filter Member Associate Member Public Reports Public Presentations Summary of Findings Summary of Findings 15
  • 16. Initial List of Information to Collect ● Virus Identification ● Method of Virus Detection & Identification ● Experience with False Positive Tests ● Investigation Organization & Management ● Communication with Regulatory Authorities; others ● Cell Line Contaminated ● Extent of Contamination All data will remain ● Source of Contamination confidential via NDAs ● Process Breach Identification between companies ● Frequency of Contamination ● Raw Material Treatment & Control System and MIT ● Process Controls ● Methods of Decontamination ● Corrective Actions; Restart ● Preventive Actions ● Lessons Learned ● Success of Actions Taken 16
  • 17. Project Goals 1. Collect and analyze consortium member virus contamination data (if experienced by member) 2. Compile processed data into a searchable database with access for members while maintaining confidentiality 3. Uncover any new risk factors for contamination 4. Determine best industry practice to mitigate risk 5. Identify technology gaps for further R&D 6. Publish summary of key findings from the project 17
  • 18. Project Stages & Proposed Timeline Project Stage Target Completion Develop data collection instrument, questionnaire, and Complete process Raw data collection from participating members & partners In Progress Anonymous data pooling, annotated and collated 2012 Preliminary report to member companies 2012 Analysis of processed data; Interpretation from CAACB 2012 forum (MIT Team & Industry Member Companies) Full research report to member companies; to include all 2013 methods, data analyses, findings, recommendations Publication of Research Summary Report: Major findings & 2013+ recommendations Continuous Updates & Expansion of Data: Collection & 2013+ Analysis 18
  • 19. 2012 Consortium Workshops ● Media Treatment Workshop ● Sharing of experience with HTST, UV-C, nanofiltration and other methods of virus inactivation or removal ● Where – MIT, Cambridge, MA ● When – June 21 & 22, 2012 ● Open to Consortium member company participants and invited speakers ● Virus Contamination Project Workshop ● Currently in planning phase ● To present early draft of collected data; to solicit input on data interpretation ● When – Q4, 2012 ● Open to Consortium member data contributors 19
  • 20. How to Join ● Written information to be sent for review and discussion with colleagues and management ● Teleconference and/or company visit with Consortium Staff ● Consortium agreement and membership fee ● Company representatives to steering committee determined 20
  • 21. Contact Us ● Consortium Executive Director Dr. Stacy Springs email: ssprings@mit.edu Tel: 1-617-253-3084 ● Lead investigators Dr. Michael Wiebe Dr. James Leung email: quantumco@comcast.net email: leungjc@mit.edu Tel: 1-650-365-7022 Tel: 1-781-333-8822 21