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Molecular function and domain of rhodopsin-like receptor
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Molecular function and domain of rhodopsin-like receptor
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20 DB
2008/08/07 kaneko.satoko(at)ocha.ac.jp
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3.
molecular_function [GO:0003674]
molecular transducer activity [GO:0060089] signal transducer activity [GO:0004871] receptor activity [GO:0004872] transmembrane receptor activity [GO:0004888] G-protein coupled receptor activity [GO:0004930] rhodopsin-like receptor activity [GO:0001584]
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5.
22.66kb
Reverse strand 8 exons, CDS 1446bp (481a.a.)
6.
7.
8.
(5) processed (pseudo)gene,
unprocessed (pseudo)gene a a' unprocessed gene duplicated gene a mRNA splicing a'' processed gene pseudogene premature stop codon (insertion) (deletion)
9.
ID
ID
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11.
12.
13.
1
[apple mark+C] 2 CotEditor [apple mark+V] makorin.fasta blat 3 BLAST
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1
[apple mark+V] 2 Mus musculus dna database 3 Search Tool BLAT RUN BLAT
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16.
[apple mark+A]
[apple mark+C] CotEditor [apple mark +C] makorin.blat
17.
18.
[Alignment Locations vs.
Karyotype] [Alignment Locations vs. Query] query [Alignment Summary] query
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query
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(6)
BLAST (Basic Local Alignment Search Tool) alignment Arg Ser Val Thr Ser Gly Tyr Val Arg 5'-tacgtcaggta-3' 3'-atgcagtccat-5' Met Gln Ser Cys Ser Pro Ala Val His BLAT (Blast Like Alignment Tool) query/database 4,11(amino acid, DNA)-mer EST