3. AMIDOHYDROLASE ENZYME
• Amidohydrolases are type of hydrolase enzyme that acts
upon C-N bond in amide.
• They are categorized under EC number EC 3.5.1 and
3.5.2.
• They are called deaminase, deamidizing enzymes.
• Eg.,
• L-asparginase,
• L-glutaminase,
• Amidase, etc…
• Amidohydrolases involve in subsequent ammonification
from amino acids to ammonia
4. INTRODUCTION
• Amidase is the enzyme that catalyses the
hydrolyses of amides, and Produces Ammonia
and the corresponding Carboxylic acid.
• Amidase acts on C-N bonds in linear amides.
• E.C. No.- 3.5.1.4
RCONH2 + H2O Amidase NH3 + RCOOH
5. PRINCIPLE
• This method involves determination of the NH4 -N
released by amidase activity When Soil is incubated with
buffered (0.1 M Tris Hydroxy methyl Amino methane)
THAM. , (pH 8.5).
• The Ammonium released is determined by a rapid
procedure involving treatment of the incubated soil
sample with 2.5 M KCl Containing an amidase inhibitor
(Uranyl acetate) and steam distillation of an aliquot of
the resulting suspension with MgO for 3.3 min.
6. CHEMICALS
• Toluene
• Tris sulphuric acid buffer (0.1 m, pH 8.5)
• Amide solution (0.5 M)
• Potassium chloride (2.5 M) – uranyl acetate
(0.005 M ) solution
• Reagents for determination of Ammonia
Magnesium oxide
Boric acid indicator solution
0.0025 M H2SO4
8. PROCEDURE
Take 50ml volumetric flask
Add 5g moist soil
Add 0.2ml Toluene and 9ml Tris buffer
Mix it well
Add 1 ml 0.5M Amide solution
9. Mix well for few second
Stopper the flask
Incubate for 2 hrs at 37◦C
Add approximate 35ml KCl-UO2(C2H3O2)2:2H2O
Swirl the flask and cool at room temperature
10. Make final volume 50ml by addition of
KCl-UO2(C2H3O2)2:2H2O
Mix the content thoroughly
11. PROCEDURE FOR CONTROL
Take 50ml volumetric flask
Add 5g moist soil
Add 0.2ml Toluene and 9ml Tris buffer
Mix it well
Stopper the flask
12. Incubate for 2 hrs at 37◦C
Add approximate 35ml KCl-UO2(C2H3O2)2:2H2O
Add 1 ml 0.5M Amide solution
Swirl the flask and cool at room
temperature
13. Make final volume 50ml by addition of
KCl-UO2(C2H3O2)2:2H2O
Mix the content thoroughly
14. ESTIMATION OF RELEASED AMMONIA
Take a Erlenmeyer flask
Pipette 5ml boric acid
Put it in its special place
Pipette 20ml of the resulting soil
suspension into a 100ml distillation flask
15. Add 0.2g MgO
Steam distillate content until 30ml of
distillate are collected in the flask
Titrate the distillate with 0.005M H2SO4
16. INTRODUCTION
• The enzyme L-asparginase has important role
in nitrogen mineralization of soil.
• L-asparginase activity was first detected by
Drobni’k(1956).
Some evidence suggest that, a portion of
released NH4+ comes from hydrolysis of amide
( Asparginase and glutaminase)residues in soil
organic matter.
• E.C. No- 3.5.1.1.
17. Cont….
• It catalyses the hydrolysis of L-aspargine,
which produce L-aspartic acid and ammonia.
18. PRINCIPLE
• Frankenberger and Tabatabai(1991a) developed a
simple, precise and sensitive method to assay L-
asparginase activity in soils.
• This method uses steam distillation to determine
the NH4+ produced by L-asparginase activity
when soil is incubated at 37˚ C for 2hrs.
• The procedure developed gives quantitative
recovery of NH4-N added to soils and does not
cause chemical hydrolysis of L-aspargine.
21. Cont……
• Boric acid indicator solution
• 0.05M NaOH
• Ammonium standard soluton
• 95% ehanol
• Distiller water
22. CALCULATION
C × 50
L-asparginase activity =
dwt × 5
Where, C = measured NH4-N mL 1
dwt = dry weight of 1g moist soil
5 = Weight of used soil in test
50 = Total volume of soil suspension
23. PHYSICOCHEMICAL ANALYSIS
No Parameter Method Used
1 Colour Munsell’s Soil Colour Chart
2 pH pH Meter
3 Calcium carbonate Rapid Titration method
4 Organic carbon Walkley and Black’s method
5 Phosphorus Fiske and Subbarow’s Method
6 Sulfur Spectrophotometric method
7 Total hardness EDTA titration method
8 Inorganic nitrogen Dumas method
9 Chloride Mohr’s method
10 Bicarbonate Titration method
26. COLOUR
DISTRICT PLACE COLOR
SABARKANTHA HIMATNAGAR DARK BLACK
TALOD BROWN
MODASA BROWN
MEHSANA VIJAPUR BROWN BLACK
VISNAGAR BLACK
TARABH BROWNISH
YELLOW
PATAN NEDARA BROWN BLACK
CHANASMA BLACK
ADIYA BROWNISH
YELLOW
36. CONCLUSION
• According to the data of Amidase enzyme activity, all
samples of soil give high concentration of Amidase in
10cm depth expect Nedra from Patan district..
• In the case of L-Asparginase activity samples given
least varied in 10cm depth.
• Amidase and L-Asparginase enzyme activity shown
decreases as depth increases.
• Soil analysis data from
Carbon, Chloride, Carbonate, Sulfur, Bi-Carbonate, etc…
are in high amount in most of all samples of soil.
37. REFERENCES
• Nannipieri, P., E. Kandeler and P. Ruggiero. (2002).
Enzyme activities and microbiological and
biochemical processes in soil. p. 7–8. In R.G. Burns
and R.P. Dick (ed.) Enzymes in the environment:
Activity, ecology, and applications. Marcel
Dekker, New York.
• Tabatabai MA, Bremner JM (1971). Michaelis
constants of soil enzymes. Soil Biol. Biochem. 3: 317-
323.
• APHA, Standard Methods for Water and Waste
Water Analysis, New York. (1992)