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Gene Silencing
                       by
            Modification of Histones




Somanna A. N.
Gene Silencing
• Gene silencing is a general term
  describing epigenetic processes of gene regulation.
• Silencing is a position effect.
• Silencing can spread over large stretches of DNA
• Transcriptional gene silencing is the result
  of histone modifications, creating an environment
  of heterochromatin around a gene that makes it inaccessible
  to transcriptional machinery.
Histone Tail Modification Status Correlates with
             Transcriptional Activity
Acetylation
• These reactions are catalyzed by enzymes with "histone
  acetyltransferase" (HAT) or "histone deacetylase" (HDAC) activity.
• It also reduces affinity of tail for adjacent nucleosomes, thus
  affecting ability of nucleosome arrays to form more repressive
  higher-ordered chromatin structures.
Methylation
• These reactions are catalyzed by enzymes "histone
  methyltransferase”
• Methylation recruit silencing or regulatory proteins that bind
  methylated histones.
• Chromodomain containing proteins interact with methylated
  histone tails.
Histone Acetylation and Methylation
Silencing in Yeast( S. Cerevisiae)
  • Silencing mediated by Deacetylation and Methylation




                           Fig: Silencing at Yeast Telomere

SIR proteins (Silent Information Regulation) form a silencing complex. This complex is
recruited by Rap1.
DNA methylation can recruit Histone
   Deacetylases and Methylases


DNA methyltransferase methylate
Cytosine within promoter. This
modification binds proteins (MeCP2),
which in turn recruit complexes modifying
nucleosome and switch off gene
expression. [In Mammals]
Epigenetic Inheritence of Nucleosome
  Modification
• These modifications recruit enzymes
   that perform same modifications
   and thus propogate the state of
  modification to daughter
  chromosomes.

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Gene Silencing by Histone Modification

  • 1. Gene Silencing by Modification of Histones Somanna A. N.
  • 2. Gene Silencing • Gene silencing is a general term describing epigenetic processes of gene regulation. • Silencing is a position effect. • Silencing can spread over large stretches of DNA • Transcriptional gene silencing is the result of histone modifications, creating an environment of heterochromatin around a gene that makes it inaccessible to transcriptional machinery.
  • 3. Histone Tail Modification Status Correlates with Transcriptional Activity
  • 4. Acetylation • These reactions are catalyzed by enzymes with "histone acetyltransferase" (HAT) or "histone deacetylase" (HDAC) activity. • It also reduces affinity of tail for adjacent nucleosomes, thus affecting ability of nucleosome arrays to form more repressive higher-ordered chromatin structures.
  • 5. Methylation • These reactions are catalyzed by enzymes "histone methyltransferase” • Methylation recruit silencing or regulatory proteins that bind methylated histones. • Chromodomain containing proteins interact with methylated histone tails.
  • 7. Silencing in Yeast( S. Cerevisiae) • Silencing mediated by Deacetylation and Methylation Fig: Silencing at Yeast Telomere SIR proteins (Silent Information Regulation) form a silencing complex. This complex is recruited by Rap1.
  • 8. DNA methylation can recruit Histone Deacetylases and Methylases DNA methyltransferase methylate Cytosine within promoter. This modification binds proteins (MeCP2), which in turn recruit complexes modifying nucleosome and switch off gene expression. [In Mammals]
  • 9. Epigenetic Inheritence of Nucleosome Modification • These modifications recruit enzymes that perform same modifications and thus propogate the state of modification to daughter chromosomes.