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Shiva Amiri, PhD
Chief Product Officer
MLConf Seattle - May 1st 2015
Incorporating the Real Time Component into
Analytics and Machine Learning
The Challenge
 One or more structural limitations have significantly constrained
successful data mining applications and initiatives
 Frequently, these problems are associated with the amount of data,
the rate of data generation and the number of attributes (variables)
to be processed –
 1000’s of data variables form which to model from (dimensionality)
 100’s of billions of records to model data
 Continuously evolving data elements and changing sets of data
 The need to execute and adapt in Real Time
 Increasingly, this “big data” environment expands beyond the
capabilities of conventional data mining methods and technology
2
Source: http://www.informationweek.com/big-data/big-data-analytics/5-
analytics-bi-data-management-trends-for-2015/a/d-id/1318551 -
09/01/2015
What are the trends?
4
The Market Opportunity
 IDC Reports Big Data Analytics market at $125 billion in 2015
 Gartner reports the Internet of Things (IoT) will have 25 billion devices with
sensors connected by 2020 producing exabytes of data
 IoT/E Market size by 2020 will exceed $14 trillion
 Bioinformatics market is $7.5 billion according to Gartner
 Streaming data, Real Time analytics and machine learning remain a
significant challenge for multiple sectors
Which verticals are we looking at?
 Bioinformatics, Computational Biology – genetics, proteomics, EEG data,
fMRI, Molecular Dynamics data, etc.
 Financials – behaviour, signals, patterns
 Internet of Everything
 Other fast and massive data is what we are interested in
5
Disorder X
An example: Complexity of Brain Disorders
Disorder Y
7
What kinds of questions do we want to ask?
 How do the genes and proteins in disorders relate
to each other – clustering, regression,
classification, etc.
 What are the other factors involved in disease
onset and progression?
 What about environment data? Quality of Life?
Education? Socioeconomic status? - natural
language processing (NLP), classification,
predictive modeling, etc.
 How can we handle massive amounts of brain
sensing and imaging data (EEG, fMRI) and link
them to other data (genes and proteins)?
 Integrative analytics
 And questions we don’t know we have
Big Data: The Four V’s
RTDS’ SymetryMLTM : What have we built?
 SymetryML™ is a distributed GPU-
implemented predictive analysis and modeling
technology for our Massive Data universe…
 V3.5 released – real time analytics of large-scale
data
 Exploration(statistics) and model building,
assessment and prediction in real time
 Robust security and privacy features
 V4.0 being developed – distributed computing
capability
9
How is SymetryML™ addressing these
challenges?
 The V’s of Big Data
 SymetryMLTM can handle heavy volumes of data (Volume)
 SymetryMLTM can handle streaming data (Velocity)
 Accelerated hardware with GPUs and distributed computing
 REST API – flexibility and modular design, seamless integration into
existing systems or development of custom systems
 Simplicity of the design
 Real Time analytics – exploration and model generation/prediction,
handling massive data with unprecedented speed in real time
 Privacy and security
 Service Oriented Architecture – XaaS
11
 Faster: In minutes SymetryMLTM can utilize 10,000’s+ variables by constructing 1000’s of model
combinations and ultimately reduce variables to a single model - builds models in real time as
it learns
 Smarter with Scale: Linearly scalable with zero limitation in length of data sets and depth of
categorical data allows for unlimited learning from data
 More Agile on-the-fly: Continuous learning, both distributed and parallel
 Simply Deployed: SymetryMLTM models can be deployed in real time or in the form of scripts
(SQL, Java, etc.)
Proprietary Statistical
Representation
Data
Learner Modeler
Predictor
Explorer
12
Parallel
Processing/Distributed
Computing
Incremental/Decremental
Learning
(no rescan)
Automated Variable
Selection
Add variables on-the-fly
SymetryML™
A few key features
Component Technologies
Component
Web UI
REST API
Core
functionalities
NVIDIA GPU
support
Project
sym-web
sym-rest
sym-core
sym-core
Language
JavaScript
Java
Java
C/C++
SymetryML™-CORE
Basic Functionality:
 Learn / Forget data
 Univariate Analysis – Mean, StDev, F Test, Z Test, T Test,
 Bivariate Analysis
 Correlation
 Hypothesis Testing
 Chi-square Testing
 ANOVA
 Model Selection and Creation
 Predictions
 Assessment
 Persistence
Web-UI - exploration
15
Web-UI - exploration
16
Web-UI - modeling
17
Web-UI - assessment
18
RTDS Inc. – Headlines
 Team of 6 engineers and Data Scientists in Toronto, Board in NY
 Focus on Technology Differentiation
 Technology timeline
 March ’13 – Launched .NET Based Desktop Version
 July ’13 – Launched SymetryMLTM Server with REST API.
 December ’13 – Successfully deployed first GPU-based system
 June ‘14 – Algorithmic Support Expanded
 ’15 Roadmap: Aggressive, Attainable and Defensible
 Proven technology with successful deployment in advertising
 Current Financing
 Mogility Capital
19
Next steps
 We’ve been successful with this technology in the mobile advertising
space…now we want to use the power of this technology in other strategic
sectors
 We are looking for partners as beta users - with unique datasets and use cases
- what kinds of questions can we help answer with your data?
 We are looking for integration partners where we can both enhance our
offering
 Develop the next version (v4.0) of SymetryMLTM – fully parallel with
Apache Spark
20
Thank you
shiva@rtdsinc.com
neil@rtdsinc.com
www.rtdsinc.com
21
Contact
22
SymetryMLTM and
GPUs
• Native library that uses NVIDIA GPUs are available for:
• Linux 64 bit (CentOS 5.x and Amazon Linux)
• Use of GPUs for core operations:
• Learning / Forgetting data
• Model Building
• Model Selection
• Interactive HTML 5 application
• Direct connection to SYM-REST
• It is de-facto a light weight front-end to SYM-REST
• Based on Sencha Ext-JS 4.x
SymetryMLTM-WEB
• Provides a Restful API to sym-core.
• Supported Data Sources:
• Amazon S3
• SFTP
• HTTP/HTTPS
• Redshift
• Upcoming Data Sources:
• HDFS
• ODBC/JDBC
SYM-REST
• User of the rest-API needs an access key
• We generate these keys
• Key is AES 128 bits.
• Every REST request is authenticated with a HMAC
(SHA1) code based on part of the request
• If data encryption is needed, then usage of HTTPS
is possible
SYM-REST Security
Finance data example
• NASDAQ TotalView-ITCH Intraday Data Modeling
 175Gb - one month of raw data
 55Gb of transactions for NASDAQ100 constituents
 12M rows/400 attributes
 Univariate analysis across securities
 Covariance and Hypothesis Testing
 Model Building: Classification/Regression
 Prediction of Price Movement
 Full Order Book Analysis
27

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Real Time Analytics and Machine Learning for Bioinformatics and Financial Data

  • 1. Shiva Amiri, PhD Chief Product Officer MLConf Seattle - May 1st 2015 Incorporating the Real Time Component into Analytics and Machine Learning
  • 2. The Challenge  One or more structural limitations have significantly constrained successful data mining applications and initiatives  Frequently, these problems are associated with the amount of data, the rate of data generation and the number of attributes (variables) to be processed –  1000’s of data variables form which to model from (dimensionality)  100’s of billions of records to model data  Continuously evolving data elements and changing sets of data  The need to execute and adapt in Real Time  Increasingly, this “big data” environment expands beyond the capabilities of conventional data mining methods and technology 2
  • 4. 4 The Market Opportunity  IDC Reports Big Data Analytics market at $125 billion in 2015  Gartner reports the Internet of Things (IoT) will have 25 billion devices with sensors connected by 2020 producing exabytes of data  IoT/E Market size by 2020 will exceed $14 trillion  Bioinformatics market is $7.5 billion according to Gartner  Streaming data, Real Time analytics and machine learning remain a significant challenge for multiple sectors
  • 5. Which verticals are we looking at?  Bioinformatics, Computational Biology – genetics, proteomics, EEG data, fMRI, Molecular Dynamics data, etc.  Financials – behaviour, signals, patterns  Internet of Everything  Other fast and massive data is what we are interested in 5
  • 6. Disorder X An example: Complexity of Brain Disorders Disorder Y
  • 7. 7 What kinds of questions do we want to ask?  How do the genes and proteins in disorders relate to each other – clustering, regression, classification, etc.  What are the other factors involved in disease onset and progression?  What about environment data? Quality of Life? Education? Socioeconomic status? - natural language processing (NLP), classification, predictive modeling, etc.  How can we handle massive amounts of brain sensing and imaging data (EEG, fMRI) and link them to other data (genes and proteins)?  Integrative analytics  And questions we don’t know we have
  • 8. Big Data: The Four V’s
  • 9. RTDS’ SymetryMLTM : What have we built?  SymetryML™ is a distributed GPU- implemented predictive analysis and modeling technology for our Massive Data universe…  V3.5 released – real time analytics of large-scale data  Exploration(statistics) and model building, assessment and prediction in real time  Robust security and privacy features  V4.0 being developed – distributed computing capability 9
  • 10. How is SymetryML™ addressing these challenges?  The V’s of Big Data  SymetryMLTM can handle heavy volumes of data (Volume)  SymetryMLTM can handle streaming data (Velocity)  Accelerated hardware with GPUs and distributed computing  REST API – flexibility and modular design, seamless integration into existing systems or development of custom systems  Simplicity of the design  Real Time analytics – exploration and model generation/prediction, handling massive data with unprecedented speed in real time  Privacy and security  Service Oriented Architecture – XaaS
  • 11. 11  Faster: In minutes SymetryMLTM can utilize 10,000’s+ variables by constructing 1000’s of model combinations and ultimately reduce variables to a single model - builds models in real time as it learns  Smarter with Scale: Linearly scalable with zero limitation in length of data sets and depth of categorical data allows for unlimited learning from data  More Agile on-the-fly: Continuous learning, both distributed and parallel  Simply Deployed: SymetryMLTM models can be deployed in real time or in the form of scripts (SQL, Java, etc.) Proprietary Statistical Representation Data Learner Modeler Predictor Explorer
  • 13. Component Technologies Component Web UI REST API Core functionalities NVIDIA GPU support Project sym-web sym-rest sym-core sym-core Language JavaScript Java Java C/C++
  • 14. SymetryML™-CORE Basic Functionality:  Learn / Forget data  Univariate Analysis – Mean, StDev, F Test, Z Test, T Test,  Bivariate Analysis  Correlation  Hypothesis Testing  Chi-square Testing  ANOVA  Model Selection and Creation  Predictions  Assessment  Persistence
  • 19. RTDS Inc. – Headlines  Team of 6 engineers and Data Scientists in Toronto, Board in NY  Focus on Technology Differentiation  Technology timeline  March ’13 – Launched .NET Based Desktop Version  July ’13 – Launched SymetryMLTM Server with REST API.  December ’13 – Successfully deployed first GPU-based system  June ‘14 – Algorithmic Support Expanded  ’15 Roadmap: Aggressive, Attainable and Defensible  Proven technology with successful deployment in advertising  Current Financing  Mogility Capital 19
  • 20. Next steps  We’ve been successful with this technology in the mobile advertising space…now we want to use the power of this technology in other strategic sectors  We are looking for partners as beta users - with unique datasets and use cases - what kinds of questions can we help answer with your data?  We are looking for integration partners where we can both enhance our offering  Develop the next version (v4.0) of SymetryMLTM – fully parallel with Apache Spark 20
  • 22. 22
  • 23. SymetryMLTM and GPUs • Native library that uses NVIDIA GPUs are available for: • Linux 64 bit (CentOS 5.x and Amazon Linux) • Use of GPUs for core operations: • Learning / Forgetting data • Model Building • Model Selection
  • 24. • Interactive HTML 5 application • Direct connection to SYM-REST • It is de-facto a light weight front-end to SYM-REST • Based on Sencha Ext-JS 4.x SymetryMLTM-WEB
  • 25. • Provides a Restful API to sym-core. • Supported Data Sources: • Amazon S3 • SFTP • HTTP/HTTPS • Redshift • Upcoming Data Sources: • HDFS • ODBC/JDBC SYM-REST
  • 26. • User of the rest-API needs an access key • We generate these keys • Key is AES 128 bits. • Every REST request is authenticated with a HMAC (SHA1) code based on part of the request • If data encryption is needed, then usage of HTTPS is possible SYM-REST Security
  • 27. Finance data example • NASDAQ TotalView-ITCH Intraday Data Modeling  175Gb - one month of raw data  55Gb of transactions for NASDAQ100 constituents  12M rows/400 attributes  Univariate analysis across securities  Covariance and Hypothesis Testing  Model Building: Classification/Regression  Prediction of Price Movement  Full Order Book Analysis 27

Editor's Notes

  1. What is the problem in data mining? How does this solve the problem. The ability to model 2000 variable combinations faster than anyone. The ability to update models in real time. The ability to introduce new variables into models without barriers.
  2. What is the problem in data mining? How does this solve the problem. The ability to model 2000 variable combinations faster than anyone. The ability to update models in real time. The ability to introduce new variables into models without barriers.