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A Heaven of Allergomes:
     Rubber Tree
  (Hevea brasiliensis)

    Biswapriya Biswavas Misra, Ph.D.
                   CCB
             23rd July, 2012
Allergens through the Eyes of NCBI/ Entrez
Allfam List of Allergens….
Allfam List of Allergens….
Allfam List of Allergens….
Allfam List of Allergens….
Allfam List of Allergens….
Hevea brasiliensis: List of Grouped
           Allergens….
Hevea brasiliensis: List of Grouped
           Allergens….
Hevea brasiliensis: List of Grouped
           Allergens….
Hevea brasiliensis: List of Available
    Structures for Allergens….
Hevea brasiliensis: List of Available
    Structures for Allergens….
SDAP List of Hevea brasiliensis Allergens….
Allermatch List of Hevea brasiliensis Allergens….
Gene Ontology [GO] of Hevea brasiliensis Allergens….
Functional Annotation of Hevea brasiliensis Allergens




                                                 Cluster 1
Functional Annotation of Hevea brasiliensis Allergens


                                             Cluster 2




           Cluster 3




  Cluster 4
Functional Annotation of Hevea brasiliensis Allergens
Functional Annotation of Hevea brasiliensis Allergens
Functional Annotation of Hevea brasiliensis Allergens
Pathway Assignment [Panther] and EC Numbers
         for Hevea brasiliensis Allergens
Sequence Annotation of Hevea brasiliensis Allergens
              -PIR Superfamily
Sequence Annotation of Hevea brasiliensis Allergens
            - PROSITE Patterns
Sequence Annotation of Hevea brasiliensis Allergens
                    - Pfam….
Sequence Annotation of Hevea brasiliensis Allergens
                    - Pfam….
Sequence Annotation of Hevea brasiliensis Allergens
                  - InterPro….
Sequence Annotation of Hevea brasiliensis Allergens
                  - InterPro….
Tissue Specificity of Expression for
      Hevea brasiliensis Allergens
Thank You


  Note: Study based solely on Publicly
    available Databases, Platforms/
Softwares, Sequences and Information.
   Appropriate sources are thanked.

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A Heaven of Allergomes: Rubber Tree (Hevea brasiliensis)