G09-Misc-EMBOSS

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Bioinformatics Open Source Conference

EMBOSS: New developments and extended data access (Peter Rice)

Technology

EMBOSS European Molecular Biology Open Software Suite Open-Bio Project Update 2011 Peter Rice pmr@ebi.ac.uk Alan Bleasby, Jon Ison, Mahmut Uludag, Michael Schuster

A quick introduction ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

Who do we serve? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

EMBOSS command line interface ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

EMBOSS Update ,[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

Data sources for EMBOSS ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

New data types: input and output ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

New query language ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

EDAM ontology ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

DRCAT Data Resource Catalogue ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

Ontologies: NCBI Taxonomy ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

Installation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

EMBOSS Interfaces and wrappers ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

EMBOSS Future Plans ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

The Emboss Team BOSC 2011: EMBOSS 17.07.11 Peter Rice Alan Bleasby Jon Ison Mahmut Uludag Michael Schuster

Acknowledgements ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

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G09-Misc-EMBOSS

1. EMBOSS European Molecular Biology Open Software Suite Open-Bio Project Update 2011 Peter Rice pmr@ebi.ac.uk Alan Bleasby, Jon Ison, Mahmut Uludag, Michael Schuster

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15. The Emboss Team BOSC 2011: EMBOSS 17.07.11 Peter Rice Alan Bleasby Jon Ison Mahmut Uludag Michael Schuster

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G09-Misc-EMBOSS

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