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Q. How do you classify amino acids?

A. Based on the structure, amino acids are classified into: Simple amino acids,
Branched chain amino acids, Hydroxy amino acids, Sulfur containing amino acids,
Amino acids with amide group, Acidic amino acids, Basic amino acids, Aromatic
amino acids, Heterocyclic amino acids, Imino acid and Derived amino acids.

Q. What are branched chain amino acids?

A. Valine, leucine and isoleucine.

Q. What are hydroxy amino acids?

A. Serine and threonine.

Q. Name the Sulfur containing amino acids.

A. Cysteine and methionine.

Q. Name the acidic amino acids.

A. Aspartic acid and glutamic acid.

Q. What are the basic amino acids?

A. Lysine and arginine.

Q. Which amino acid has a net positive charge at physiological pH?

A. Arginine and lysine.

Q. Amino acid containing a thioether bond is.

A. Methionine.

Q. Give examples of amino acids with hydrophobic side chains.

A. Valine, leucine, isoleucine.

Q. Give the names of aromatic amino acids.

A. Phenylalanine and tyrosine.

Q. What are heterocyclic amino acids?

A. Tryptophan and histidine.

Q. Give an example of an imino acid.

A. Proline.


          Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition,
                               email:ehab10f@gmail.com
Q. Give examples of derived amino acids.

A. Hydroxy proline, hydroxy lysine, ornithine, citrulline, homocysteine.

Q. Arginine contains which special group?

A. Guanidinium group (-NH-CNH-NH2).

Q. Benzene group is present in which amino acid?

A. Phenyl alanine.

Q. Phenol group is present in which amino acid?

A. Tyrosine.

Q. Tryptophan contains what special group?

A. Indole group.

Q. Which special group is present in Histidine?

A. Imidazole group.

Q. Name some hydrophobic amino acids.

A. Valine, leucine and isoleucine.

Q. Pyrrolidine group is present in which amino acid?

A. Proline.

Q. Hydrophobic bonds are formed in protein between which amino acids?

A. Valine, leucine and isoleucine residues.

Q. What is the basis of classification of amino acids into ketogenic and
glucogenic?

A. Ketogenic amino acids enter into the metabolic pathway of fats, while glucogenic
amino acids enter the pathway of glucose metabolism.

Q. Name a purely ketogenic amino acid.

A. Leucine.

Q. Name some glucogenic amino acids.

A. Glycine; serine; aspartic



          Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition,
                               email:ehab10f@gmail.com
Q. Which amino acid is synthesised after it gets incorporated into the protein?

A. Hydroxyproline .

Q. What are essential amino acids?

A. They cannot be synthesized in the body; and so, they are to be provided in the diet.

Q. How many amino acids are essential?

A. Eight amino acids are essential; two are semi-essential and the rest 10 are non-
essential.

Q. Are non-essential amino acids necessary for the body?

A. They are also necessary for protein synthesis, but they can be synthesized by the
body and need not be essentially present in the diet

Q. Name any three essential amino acids.

A. Isoleucine, leucine, threonine.

Q. Is phenyl alanine an essential amino acid?

A. Yes.

Q. What about Tyrosine?

A. Tyrosine is non-essential; it is synthesized from phenyl alanine.

Q. Name the semi-essential amino acids.

A. Histidine and arginine.

Q. Why are they called semi-essential?

A. Because growing children require them in food. But they are not essential for the
adult individual.

Q. What is iso-electric point?

A. The pH at which the molecule carries no net charge is called iso-electric point.

Q. What are the characteristic features of iso-electric pH.?

A. At iso-electric point the amino acid will carry no net charge; there is no mobility in
electrical field, solubility will be minimum, the tendency for precipitation will be
maximum



          Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition,
                               email:ehab10f@gmail.com
Q. What is the speciality of Histidine?

A. The pK value of Histidine is 6.1, and therefore effective as a buffer at the
physiological pH of 7.4. The buffering capacity of plasma proteins and hemoglobin is
mainly due to histidine residue.

Q. Which is the amino acid having maximum buffering capacity at physiological
pH?

A. Histidine.

Q. Which amino acid is optically inactive?

A. Glycine.

Q. What are the isomers of amino acids?

A. D and L varieties.

Q. What are natural amino acids?

A. Only L amino acids are seen in large quantities in nature.

Q. Can you name some substances where D-amino acids are seen?

A. D-amino acids are seen in cell walls of micro-organisms and as constituents of
certain antibiotics such as gramicidin-S, polymyxin, actinomycin-D and valinomycin

Q. What is meant by decarboxylation of an amino acid?

A. The carboxyl group is removed from the amino acids to form the corresponding
amine

Q. Give examples of decarboxylation reactions.

A. Histidine to histamine; tyrosine to tyramine; tryptophan to tryptamine.

Q. What is produced when Glutamic acid is decarboxylated?

A. Gamma amino butyric acid or GABA.

Q. What is glutamine?

A. That is the amide of glutamic acid.

Q. What is an amide?

A. The extra carboxyl group (other than alpha carboxyl) can combine with ammonia
to form the corresponding amide
          Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition,
                               email:ehab10f@gmail.com
Q. How asparagine is produced?

A. Aspartic acid + ammonia will form asparagine.

Q. What is transamination?

A. The alpha amino group of amino acid can be transferred to alpha keto acid to form
the corresponding new amino acid and alpha keto acid

Q. Give an example of transamination reaction.

A. Glutamic acid + pyruvic acid alpha keto glutarate + alanine.

Q. What is the product of transamination reaction of pyruvate with glutamate?

A. Alanine and alpha keto glutarate

Q. What is the biological significance of transamination reaction?

A. These are important for the inter conversion of amino acids. Non-essential amino

by this process

Q. What is the clinical significance of transaminases?

A. Transaminases in blood are elevated in liver and heart diseases.

Q. What is the significance of SH groups in proteins?

A. The SH group of cysteine can form a disulfide (SS) bond with another cysteine
residue. The two cysteine residues can connect two polypeptide chains by the
formation of interchain disulfide bonds.

Q. Glutathione is made up of which amino acids?

A. Glutamic acid, cysteine and glycine.

Q. Phosphorylation is taking place on which amino acid residue?

A. Serine

Q. What is ninhydrin reaction?

A. All amino acids when heated with ninhydrin will give a pink colour.

Q. What is the importance of ninhydrin reaction?

A. It is used for qualitative test and quantitative estimation of amino acids. It is often
used for detection of amino acids in chromatography.
            Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition,
                                 email:ehab10f@gmail.com
Q. Do proteins give a color with ninhydrin?

A. Proteins do not give a true color reaction; but N terminal end amino group of
protein will react with ninhydrin, to produce a blue color.

Q. What is biuret reaction?

A. Cupric ions in alkaline medium form a violet colour with peptide bond nitrogen.

Q. Will amino acids give a positive biuret test?

A. No. This needs a minimum of two peptide bonds.

Q. What is the use of biuret reaction?

A. This reaction can be used for qualitative identification and quantitative estimation
of proteins.

Q. What is biuret?

A. The name is derived from the compound biuret, a condensation product of two
urea molecules, which also gives a positive color test.

Q. What is the basis of xanthoproteic test?

A. The ring systems in phenyl alanine, tyrosine and tryptophan will answer this test.

Q. The protein which does not answer the aldehyde test is.

A. Gelatin.




          Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition,
                               email:ehab10f@gmail.com

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3 amino acids structure and properties q and a

  • 1. Q. How do you classify amino acids? A. Based on the structure, amino acids are classified into: Simple amino acids, Branched chain amino acids, Hydroxy amino acids, Sulfur containing amino acids, Amino acids with amide group, Acidic amino acids, Basic amino acids, Aromatic amino acids, Heterocyclic amino acids, Imino acid and Derived amino acids. Q. What are branched chain amino acids? A. Valine, leucine and isoleucine. Q. What are hydroxy amino acids? A. Serine and threonine. Q. Name the Sulfur containing amino acids. A. Cysteine and methionine. Q. Name the acidic amino acids. A. Aspartic acid and glutamic acid. Q. What are the basic amino acids? A. Lysine and arginine. Q. Which amino acid has a net positive charge at physiological pH? A. Arginine and lysine. Q. Amino acid containing a thioether bond is. A. Methionine. Q. Give examples of amino acids with hydrophobic side chains. A. Valine, leucine, isoleucine. Q. Give the names of aromatic amino acids. A. Phenylalanine and tyrosine. Q. What are heterocyclic amino acids? A. Tryptophan and histidine. Q. Give an example of an imino acid. A. Proline. Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition, email:ehab10f@gmail.com
  • 2. Q. Give examples of derived amino acids. A. Hydroxy proline, hydroxy lysine, ornithine, citrulline, homocysteine. Q. Arginine contains which special group? A. Guanidinium group (-NH-CNH-NH2). Q. Benzene group is present in which amino acid? A. Phenyl alanine. Q. Phenol group is present in which amino acid? A. Tyrosine. Q. Tryptophan contains what special group? A. Indole group. Q. Which special group is present in Histidine? A. Imidazole group. Q. Name some hydrophobic amino acids. A. Valine, leucine and isoleucine. Q. Pyrrolidine group is present in which amino acid? A. Proline. Q. Hydrophobic bonds are formed in protein between which amino acids? A. Valine, leucine and isoleucine residues. Q. What is the basis of classification of amino acids into ketogenic and glucogenic? A. Ketogenic amino acids enter into the metabolic pathway of fats, while glucogenic amino acids enter the pathway of glucose metabolism. Q. Name a purely ketogenic amino acid. A. Leucine. Q. Name some glucogenic amino acids. A. Glycine; serine; aspartic Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition, email:ehab10f@gmail.com
  • 3. Q. Which amino acid is synthesised after it gets incorporated into the protein? A. Hydroxyproline . Q. What are essential amino acids? A. They cannot be synthesized in the body; and so, they are to be provided in the diet. Q. How many amino acids are essential? A. Eight amino acids are essential; two are semi-essential and the rest 10 are non- essential. Q. Are non-essential amino acids necessary for the body? A. They are also necessary for protein synthesis, but they can be synthesized by the body and need not be essentially present in the diet Q. Name any three essential amino acids. A. Isoleucine, leucine, threonine. Q. Is phenyl alanine an essential amino acid? A. Yes. Q. What about Tyrosine? A. Tyrosine is non-essential; it is synthesized from phenyl alanine. Q. Name the semi-essential amino acids. A. Histidine and arginine. Q. Why are they called semi-essential? A. Because growing children require them in food. But they are not essential for the adult individual. Q. What is iso-electric point? A. The pH at which the molecule carries no net charge is called iso-electric point. Q. What are the characteristic features of iso-electric pH.? A. At iso-electric point the amino acid will carry no net charge; there is no mobility in electrical field, solubility will be minimum, the tendency for precipitation will be maximum Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition, email:ehab10f@gmail.com
  • 4. Q. What is the speciality of Histidine? A. The pK value of Histidine is 6.1, and therefore effective as a buffer at the physiological pH of 7.4. The buffering capacity of plasma proteins and hemoglobin is mainly due to histidine residue. Q. Which is the amino acid having maximum buffering capacity at physiological pH? A. Histidine. Q. Which amino acid is optically inactive? A. Glycine. Q. What are the isomers of amino acids? A. D and L varieties. Q. What are natural amino acids? A. Only L amino acids are seen in large quantities in nature. Q. Can you name some substances where D-amino acids are seen? A. D-amino acids are seen in cell walls of micro-organisms and as constituents of certain antibiotics such as gramicidin-S, polymyxin, actinomycin-D and valinomycin Q. What is meant by decarboxylation of an amino acid? A. The carboxyl group is removed from the amino acids to form the corresponding amine Q. Give examples of decarboxylation reactions. A. Histidine to histamine; tyrosine to tyramine; tryptophan to tryptamine. Q. What is produced when Glutamic acid is decarboxylated? A. Gamma amino butyric acid or GABA. Q. What is glutamine? A. That is the amide of glutamic acid. Q. What is an amide? A. The extra carboxyl group (other than alpha carboxyl) can combine with ammonia to form the corresponding amide Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition, email:ehab10f@gmail.com
  • 5. Q. How asparagine is produced? A. Aspartic acid + ammonia will form asparagine. Q. What is transamination? A. The alpha amino group of amino acid can be transferred to alpha keto acid to form the corresponding new amino acid and alpha keto acid Q. Give an example of transamination reaction. A. Glutamic acid + pyruvic acid alpha keto glutarate + alanine. Q. What is the product of transamination reaction of pyruvate with glutamate? A. Alanine and alpha keto glutarate Q. What is the biological significance of transamination reaction? A. These are important for the inter conversion of amino acids. Non-essential amino by this process Q. What is the clinical significance of transaminases? A. Transaminases in blood are elevated in liver and heart diseases. Q. What is the significance of SH groups in proteins? A. The SH group of cysteine can form a disulfide (SS) bond with another cysteine residue. The two cysteine residues can connect two polypeptide chains by the formation of interchain disulfide bonds. Q. Glutathione is made up of which amino acids? A. Glutamic acid, cysteine and glycine. Q. Phosphorylation is taking place on which amino acid residue? A. Serine Q. What is ninhydrin reaction? A. All amino acids when heated with ninhydrin will give a pink colour. Q. What is the importance of ninhydrin reaction? A. It is used for qualitative test and quantitative estimation of amino acids. It is often used for detection of amino acids in chromatography. Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition, email:ehab10f@gmail.com
  • 6. Q. Do proteins give a color with ninhydrin? A. Proteins do not give a true color reaction; but N terminal end amino group of protein will react with ninhydrin, to produce a blue color. Q. What is biuret reaction? A. Cupric ions in alkaline medium form a violet colour with peptide bond nitrogen. Q. Will amino acids give a positive biuret test? A. No. This needs a minimum of two peptide bonds. Q. What is the use of biuret reaction? A. This reaction can be used for qualitative identification and quantitative estimation of proteins. Q. What is biuret? A. The name is derived from the compound biuret, a condensation product of two urea molecules, which also gives a positive color test. Q. What is the basis of xanthoproteic test? A. The ring systems in phenyl alanine, tyrosine and tryptophan will answer this test. Q. The protein which does not answer the aldehyde test is. A. Gelatin. Dr. Ehab Aboueladab, Associate Prof.Dr. Of Biochemistry and Nutrition, email:ehab10f@gmail.com