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Advancing Research at
London’s Global University
Clare Gryce

Daniel Hanlon

Research IT Services, UCL
London’s Global University
Consistently ranked in word’s top 10 Universities
Alumnae include 20 Nobel prize winners
Founded 1826; first to admit without regard to race or
religion, women on equal terms as men
8000 staff, 25% from 84 countries outside UK
~25,000 students (over 1/3 postgrads)
Annual turnover > £900 million
> £15m dependent on University HPC
Highly multi-disciplinary
Delivering a Culture of Wisdom
“UCL is London’s research powerhouse, with a commitment to enhancing the
lives of people in the capital, the UK and around the world. Our academics
have breadth and depth of expertise across the entire range of academic
disciplines. Individually, they expand our understanding of the world;
collectively and collaboratively, they deliver analysis that addresses the major
challenges facing humanity” Professor David Price, UCL Vice-Provost
(Research)
•  UCL Grand Challenges
– Impact
•  UCL Research Frontiers
– Enquiry and ‘curiosity’
Underpinning Research
•  Research
IT Services
•  Established
June 2012
•  Support and
enablement
across research
lifecycle
IRIS
HPC
Collaboration
tools
Research DataRPS
UCL Discovery
Research Data
Research IT Services
•  Investment in people and expertise
–  Research software development initiative
–  Comprehensive training programme
•  Collaboration and Innovation
–  e-Infrastructure South
–  UK Research Data community
–  Vendor partnership
Innovation and Skills
UCL’s case for Research Data Initiative
•  Many departments and research groups with long
history of excellence
–  Lost opportunity for new research building on old
•  UCL is a highly multi-disciplinary institution
–  Lost opportunity for cross-disciplinary re-use
•  Unmanaged datasets are lost datasets
–  Increasing burden to researchers
–  Backup, Failing USB HDDs, AuthN problems
All carrots, no sticks
•  Research Data is an offering
•  Projects can and will opt out
•  Remove the burden of managing storage
•  Resiliency is better than backup
•  Remove burden of compliance with
Research Council requirements
All carrots, no (hardly any) sticks
•  Research Data is an offering
•  Projects can and will opt out
•  Remove the burden of managing storage
•  Resiliency is better than backup
•  Remove burden of compliance with
Research Council requirements
Requirements capture
•  Researchers – We want…
–  Everything! but more! faster! and shinier!
–  NFS, CIFS, scp, GridFTP, Cloud (Dro***x)
•  Institution – Solution must have…
–  Low admin overhead
–  Cheap (cost per TB)
–  High density
Architecture choices
•  Simple
–  start with tried and trusted
–  challenge the Big Data hysteria
•  Strong abstractions
–  avoiding lock-in to proprietary technology
•  Hedge bets
–  Build in migration between storage solutions
•  Project-based
Separate Live and Archive
•  Live
–  Mutable
–  Address current requirement
–  Private
•  Archive
–  Immutable
–  Exploitable
–  Transfer of responsibility
Metadata
•  Registration
–  Principle Investigator
–  Project name
–  Members
–  Dates
–  Funder
•  Enrichment for Archive
–  Domain specific
iRODS
http://www.irods.org
•  Metadata store
•  Bridge between different areas and storage types
–  Conventional storage
–  Object storage
–  Tape
•  Metadata store
–  Possibility for enrichment during live phase
WOS
•  Simple Object Store
–  REST API
–  Policies
–  Geographical redundancy
•  Highly scalable… >10 PB deployments
•  Low admin overhead
•  Native iRODS connector
WOS Access
•  NAS presentation
–  expose WOS as CIFS or NFS mount points
–  HA and backed up in WOS
•  Open architecture based on Open Source projects
–  easy to build upon
GPFS – IBM’s General Parallel FileSystem
•  The conventional choice
–  POSIX filesystem
–  High performance, parallel transfers
•  Connect with UCL’s existing HPC resources
–  Multi-cluster around UCL
•  Many options for exports
–  Native GPFS, samba, scp, cNFS
–  Non-trivial to manage interactions/locking issues
Cloud – “The storage that dare not speak its name”
•  Very widely used in academia (unofficially)
–  need to satisfy a very real requirement
•  Rapidly evolving
–  standards needed (not S3!)
•  Oxygen Cloud
–  Local storage
–  Local authN
–  Local files can be stubs or fully synchronised
Current state of play
•  Number of projects
–  11
•  Number of users
–  22
•  Volume of data
–  35TB
•  Continuing to deploy and slowly
expand users
Project
Registration
Manual
Process
Smaller initial
deployment but to
scale with phase II
Storage
connector
Cloud
infrastructure
AD/Moonshot
infrastructure
AuthN
connector
Client applications
mirror local files in
to RD live storage
Create
project
group
E-mail
with
cloud
access
details
DDN SFA12K
iCAT
Metadata
store
E-mail
with
campus
access
details
Legion
CS cluster
etc...
GPFS/NFS/
Samba/ssh/
iRODS via PAM
Store high level
project metadata
Mounted access via
GPFS/CIFS/NFS/
WebDAV
sshd
(gridftpd)
Storage resiliency
>10Gb network
Asynchronous
access via
scp, iRODS
Policy driven
replication,
encryption and
backup as required
with project-level
granularity
DDN WOS
Challenges
•  Authentication
–  Multiple access mechanisms with single AuthN
–  Cross-University collaboration (Moonshot)
•  Networking
–  central storage vs local NAS device
–  poor connectivity to some departments
•  Multiple access mechanisms
–  Multiple views…
Clare Gryce c.gryce@ucl.ac.uk
Daniel Hanlon d.hanlon@ucl.ac.uk

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Advancing Research at London's Global University

  • 1. Advancing Research at London’s Global University Clare Gryce
 Daniel Hanlon
 Research IT Services, UCL
  • 2. London’s Global University Consistently ranked in word’s top 10 Universities Alumnae include 20 Nobel prize winners Founded 1826; first to admit without regard to race or religion, women on equal terms as men 8000 staff, 25% from 84 countries outside UK ~25,000 students (over 1/3 postgrads) Annual turnover > £900 million > £15m dependent on University HPC Highly multi-disciplinary
  • 3. Delivering a Culture of Wisdom “UCL is London’s research powerhouse, with a commitment to enhancing the lives of people in the capital, the UK and around the world. Our academics have breadth and depth of expertise across the entire range of academic disciplines. Individually, they expand our understanding of the world; collectively and collaboratively, they deliver analysis that addresses the major challenges facing humanity” Professor David Price, UCL Vice-Provost (Research) •  UCL Grand Challenges – Impact •  UCL Research Frontiers – Enquiry and ‘curiosity’
  • 4. Underpinning Research •  Research IT Services •  Established June 2012 •  Support and enablement across research lifecycle IRIS HPC Collaboration tools Research DataRPS UCL Discovery Research Data
  • 5. Research IT Services •  Investment in people and expertise –  Research software development initiative –  Comprehensive training programme •  Collaboration and Innovation –  e-Infrastructure South –  UK Research Data community –  Vendor partnership Innovation and Skills
  • 6. UCL’s case for Research Data Initiative •  Many departments and research groups with long history of excellence –  Lost opportunity for new research building on old •  UCL is a highly multi-disciplinary institution –  Lost opportunity for cross-disciplinary re-use •  Unmanaged datasets are lost datasets –  Increasing burden to researchers –  Backup, Failing USB HDDs, AuthN problems
  • 7. All carrots, no sticks •  Research Data is an offering •  Projects can and will opt out •  Remove the burden of managing storage •  Resiliency is better than backup •  Remove burden of compliance with Research Council requirements
  • 8. All carrots, no (hardly any) sticks •  Research Data is an offering •  Projects can and will opt out •  Remove the burden of managing storage •  Resiliency is better than backup •  Remove burden of compliance with Research Council requirements
  • 9. Requirements capture •  Researchers – We want… –  Everything! but more! faster! and shinier! –  NFS, CIFS, scp, GridFTP, Cloud (Dro***x) •  Institution – Solution must have… –  Low admin overhead –  Cheap (cost per TB) –  High density
  • 10. Architecture choices •  Simple –  start with tried and trusted –  challenge the Big Data hysteria •  Strong abstractions –  avoiding lock-in to proprietary technology •  Hedge bets –  Build in migration between storage solutions •  Project-based
  • 11. Separate Live and Archive •  Live –  Mutable –  Address current requirement –  Private •  Archive –  Immutable –  Exploitable –  Transfer of responsibility
  • 12. Metadata •  Registration –  Principle Investigator –  Project name –  Members –  Dates –  Funder •  Enrichment for Archive –  Domain specific
  • 13. iRODS http://www.irods.org •  Metadata store •  Bridge between different areas and storage types –  Conventional storage –  Object storage –  Tape •  Metadata store –  Possibility for enrichment during live phase
  • 14. WOS •  Simple Object Store –  REST API –  Policies –  Geographical redundancy •  Highly scalable… >10 PB deployments •  Low admin overhead •  Native iRODS connector
  • 15. WOS Access •  NAS presentation –  expose WOS as CIFS or NFS mount points –  HA and backed up in WOS •  Open architecture based on Open Source projects –  easy to build upon
  • 16. GPFS – IBM’s General Parallel FileSystem •  The conventional choice –  POSIX filesystem –  High performance, parallel transfers •  Connect with UCL’s existing HPC resources –  Multi-cluster around UCL •  Many options for exports –  Native GPFS, samba, scp, cNFS –  Non-trivial to manage interactions/locking issues
  • 17. Cloud – “The storage that dare not speak its name” •  Very widely used in academia (unofficially) –  need to satisfy a very real requirement •  Rapidly evolving –  standards needed (not S3!) •  Oxygen Cloud –  Local storage –  Local authN –  Local files can be stubs or fully synchronised
  • 18. Current state of play •  Number of projects –  11 •  Number of users –  22 •  Volume of data –  35TB •  Continuing to deploy and slowly expand users
  • 19. Project Registration Manual Process Smaller initial deployment but to scale with phase II Storage connector Cloud infrastructure AD/Moonshot infrastructure AuthN connector Client applications mirror local files in to RD live storage Create project group E-mail with cloud access details DDN SFA12K iCAT Metadata store E-mail with campus access details Legion CS cluster etc... GPFS/NFS/ Samba/ssh/ iRODS via PAM Store high level project metadata Mounted access via GPFS/CIFS/NFS/ WebDAV sshd (gridftpd) Storage resiliency >10Gb network Asynchronous access via scp, iRODS Policy driven replication, encryption and backup as required with project-level granularity DDN WOS
  • 20. Challenges •  Authentication –  Multiple access mechanisms with single AuthN –  Cross-University collaboration (Moonshot) •  Networking –  central storage vs local NAS device –  poor connectivity to some departments •  Multiple access mechanisms –  Multiple views…
  • 21.
  • 22. Clare Gryce c.gryce@ucl.ac.uk Daniel Hanlon d.hanlon@ucl.ac.uk