Introduction to spectroscopy student

R
Radulescu Luiza RadulescuMedic rezident at Suub

Introduction to spectroscopy student

Introduction to 
Spectroscopy 
What is spectroscopy? 
One of the frustrations of being a chemist is the fact that 
no matter how hard you stare at your test tube or 
round-bottomed flask you can’t actually see the individual 
molecules you have made! Even though your product 
looks the right colour and seems to give sensible results 
when you carry out chemical tests, can you be really sure 
of its precise structure? 
Fortunately, help is at hand. Although you might not be 
able to ‘see’ molecules, they do respond when light 
energy hits them, and if you can observe that response, 
then maybe you can get some information about that 
molecule. This is where spectroscopy comes in. 
Spectroscopy is the study of the way light 
(electromagnetic radiation) and matter interact. 
There are a number of different types of spectroscopic 
techniques and the basic principle shared by all is to 
shine a beam of a particular electromagnetic radiation 
onto a sample and observe how it responds to such a 
stimulus; allowing scientists to obtain information about 
the structure and properties of matter. 
What is light? 
Light carries energy in the form of tiny particles known as 
photons. Each photon has a discrete amount of energy, 
called a quantum. Light has wave properties with 
characteristic wavelengths and frequency (see the 
diagram below). 
The energy of the photons is related to the frequency (m) 
and wavelength (l) of the light through the two equations: 
E = hm and m = c /l 
(where h is Planck's constant and c is the speed of light). 
Therefore, high energy radiation (light) will have high 
frequencies and short wavelengths. 
The range of wavelengths and frequencies in light is 
known as the electromagnetic spectrum. This spectrum 
is divided into various regions extending from very short 
wavelength, high energy radiation (including gamma rays 
and X-rays) to very long wavelength, low energy radiation 
(including microwaves and broadcast radio waves). 
The visible region (white light) only makes up a small part 
of the electromagnetic spectrum considered to be 
380-770 nm. [Note that a nanometre is 10-9 metres]. 
TH(MET 
0-RADIO 
103 
MICROWAVE 
10-2 
INFARED 
10-5 
VISIBLE 
5x10-6 
ULTRAVIOLET 
10-8 
X-RAY 
10-10 
GAMMA RAY 
10-12 
WAVELENGTH(METRES) 
MOLECULES 
104 108 1012 1015 1016 1018 1020 
FREQUENCY(HZ) 
BUILDINGS 
HUMANS 
BUTTERFLY 
PINHEAD 
PROTOZOANS 
ATOMS 
ATOMIC 
NUCLEUS 
INCREASING WAVELENGTH l INCREASING FREQUENCY m 
INCREASING ENERGY E 
Copyright © 2009 Royal Society of Chemistry www.rsc.org
SPECTROSCOPY INTRODUCTION 2 
When matter absorbs electromagnetic radiation the 
change which occurs depends on the type of radiation, 
and therefore the amount of energy, being absorbed. 
Absorption of energy causes an electron or molecule to go 
from an initial energy state (ground state) to a high energy 
state (excited state) which could take the form of the 
increased rotation, vibration or electronic excitation. 
By studying this change in energy state scientists are able 
to learn more about the physical and chemical properties 
of the molecules. 
• Radio waves can cause nuclei in some atoms to 
change magnetic orientation and this forms the basis 
of a technique called nuclear magnetic resonance 
(NMR) spectroscopy. 
• Molecular rotations are excited by microwaves. 
• Electrons are promoted to higher orbitals by 
ultraviolet or visible light. 
• Vibrations of bonds are excited by infrared radiation. 
The energy states are said to be quantised because a 
photon of precise energy and frequency (or wavelength) 
must be absorbed to excite an electron or molecule from 
the ground state to a particular excited state. 
Since molecules have a unique set of energy states that 
depend on their structure, IR, UV-visible and NMR 
spectroscopy will provide valuable information about the 
structure of the molecule. 
To ‘see’ a molecule we need to use light having a 
wavelength smaller than the molecule itself (approximately 
10–10 m). Such radiation is found in the X-ray region of the 
electromagnetic spectrum and is used in the field of 
X-ray crystallography. This technique yields very detailed 
three-dimensional pictures of molecular structures – 
the only drawback being that it requires high quality 
crystals of the compound being studied. Although other 
spectroscopic techniques do not yield a three-dimensional 
picture of a molecule they do provide information about its 
characteristic features and are therefore used routinely in 
structural analysis. 
Mass spectrometry is another useful technique used by 
chemists to help them determine the structure of 
molecules. Although sometimes referred to as mass 
spectroscopy it is, by definition, not a spectroscopic 
technique as it does not make use of electromagnetic 
radiation. Instead the molecules are ionised using high 
energy electrons and these molecular ions subsequently 
undergo fragmentation. The resulting mass spectrum 
contains the mass of the molecule and its fragments 
which allows chemists to piece together its structure. 
In all spectroscopic techniques only very small quantities 
(milligrams or less) of sample are required, however, in 
mass spectrometry the sample is destroyed in the 
fragmentation process whereas the sample can be 
recovered after using IR, UV-visible and NMR 
spectroscopy. 
TECHNIQUE RADIATION WHAT CAN IT SEE? 
Copyright © 2009 Royal Society of Chemistry www.rsc.org 
Electrons flipping magnetic spin 
10-3 m 
Nuclear Magnetic 
Resonance (NMR) 
spectroscopy 
Radio waves 
(10-3 m) 
How neighbouring atoms of 
certain nuclei (e.g. 1H, 13C, 
19F, 31P) in a molecule are 
connected together, as well as 
how many atoms of these type 
are present in different locations 
in the molecule. 
10-5 m NOTE 
Molecule vibrations 
Infra-red 
spectroscopy 
Infra-red 
(10-5 m) 
The functional groups which are 
present in a molecule. 
10-8 m 
NOTE 
Electrons promoted 
to higher energy state 
UV-visible 
spectroscopy 
Ultra-violet 
(10-8 m) 
Conjugated systems (i.e. 
alternating single and double 
bonds) in organic molecules as well 
as the metal-ligand interactions in 
transition metal complexes. 
10-10 m x-ray 
X-ray 
crystallography 
X-rays 
(10-10 m) 
How all the atoms in a 
molecule are connected in a 
three-dimensional arrangement. 
Molecules fragment 
+ 
+ 
+ 
Mass 
spectrometry 
Non-spectroscopic 
technique 
The mass to charge ratio of the 
molecular ion (i.e. the molecular 
weight) and the fragmentation 
pattern which may be related to 
the structure of the molecular ion.

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Introduction to spectroscopy student

  • 1. Introduction to Spectroscopy What is spectroscopy? One of the frustrations of being a chemist is the fact that no matter how hard you stare at your test tube or round-bottomed flask you can’t actually see the individual molecules you have made! Even though your product looks the right colour and seems to give sensible results when you carry out chemical tests, can you be really sure of its precise structure? Fortunately, help is at hand. Although you might not be able to ‘see’ molecules, they do respond when light energy hits them, and if you can observe that response, then maybe you can get some information about that molecule. This is where spectroscopy comes in. Spectroscopy is the study of the way light (electromagnetic radiation) and matter interact. There are a number of different types of spectroscopic techniques and the basic principle shared by all is to shine a beam of a particular electromagnetic radiation onto a sample and observe how it responds to such a stimulus; allowing scientists to obtain information about the structure and properties of matter. What is light? Light carries energy in the form of tiny particles known as photons. Each photon has a discrete amount of energy, called a quantum. Light has wave properties with characteristic wavelengths and frequency (see the diagram below). The energy of the photons is related to the frequency (m) and wavelength (l) of the light through the two equations: E = hm and m = c /l (where h is Planck's constant and c is the speed of light). Therefore, high energy radiation (light) will have high frequencies and short wavelengths. The range of wavelengths and frequencies in light is known as the electromagnetic spectrum. This spectrum is divided into various regions extending from very short wavelength, high energy radiation (including gamma rays and X-rays) to very long wavelength, low energy radiation (including microwaves and broadcast radio waves). The visible region (white light) only makes up a small part of the electromagnetic spectrum considered to be 380-770 nm. [Note that a nanometre is 10-9 metres]. TH(MET 0-RADIO 103 MICROWAVE 10-2 INFARED 10-5 VISIBLE 5x10-6 ULTRAVIOLET 10-8 X-RAY 10-10 GAMMA RAY 10-12 WAVELENGTH(METRES) MOLECULES 104 108 1012 1015 1016 1018 1020 FREQUENCY(HZ) BUILDINGS HUMANS BUTTERFLY PINHEAD PROTOZOANS ATOMS ATOMIC NUCLEUS INCREASING WAVELENGTH l INCREASING FREQUENCY m INCREASING ENERGY E Copyright © 2009 Royal Society of Chemistry www.rsc.org
  • 2. SPECTROSCOPY INTRODUCTION 2 When matter absorbs electromagnetic radiation the change which occurs depends on the type of radiation, and therefore the amount of energy, being absorbed. Absorption of energy causes an electron or molecule to go from an initial energy state (ground state) to a high energy state (excited state) which could take the form of the increased rotation, vibration or electronic excitation. By studying this change in energy state scientists are able to learn more about the physical and chemical properties of the molecules. • Radio waves can cause nuclei in some atoms to change magnetic orientation and this forms the basis of a technique called nuclear magnetic resonance (NMR) spectroscopy. • Molecular rotations are excited by microwaves. • Electrons are promoted to higher orbitals by ultraviolet or visible light. • Vibrations of bonds are excited by infrared radiation. The energy states are said to be quantised because a photon of precise energy and frequency (or wavelength) must be absorbed to excite an electron or molecule from the ground state to a particular excited state. Since molecules have a unique set of energy states that depend on their structure, IR, UV-visible and NMR spectroscopy will provide valuable information about the structure of the molecule. To ‘see’ a molecule we need to use light having a wavelength smaller than the molecule itself (approximately 10–10 m). Such radiation is found in the X-ray region of the electromagnetic spectrum and is used in the field of X-ray crystallography. This technique yields very detailed three-dimensional pictures of molecular structures – the only drawback being that it requires high quality crystals of the compound being studied. Although other spectroscopic techniques do not yield a three-dimensional picture of a molecule they do provide information about its characteristic features and are therefore used routinely in structural analysis. Mass spectrometry is another useful technique used by chemists to help them determine the structure of molecules. Although sometimes referred to as mass spectroscopy it is, by definition, not a spectroscopic technique as it does not make use of electromagnetic radiation. Instead the molecules are ionised using high energy electrons and these molecular ions subsequently undergo fragmentation. The resulting mass spectrum contains the mass of the molecule and its fragments which allows chemists to piece together its structure. In all spectroscopic techniques only very small quantities (milligrams or less) of sample are required, however, in mass spectrometry the sample is destroyed in the fragmentation process whereas the sample can be recovered after using IR, UV-visible and NMR spectroscopy. TECHNIQUE RADIATION WHAT CAN IT SEE? Copyright © 2009 Royal Society of Chemistry www.rsc.org Electrons flipping magnetic spin 10-3 m Nuclear Magnetic Resonance (NMR) spectroscopy Radio waves (10-3 m) How neighbouring atoms of certain nuclei (e.g. 1H, 13C, 19F, 31P) in a molecule are connected together, as well as how many atoms of these type are present in different locations in the molecule. 10-5 m NOTE Molecule vibrations Infra-red spectroscopy Infra-red (10-5 m) The functional groups which are present in a molecule. 10-8 m NOTE Electrons promoted to higher energy state UV-visible spectroscopy Ultra-violet (10-8 m) Conjugated systems (i.e. alternating single and double bonds) in organic molecules as well as the metal-ligand interactions in transition metal complexes. 10-10 m x-ray X-ray crystallography X-rays (10-10 m) How all the atoms in a molecule are connected in a three-dimensional arrangement. Molecules fragment + + + Mass spectrometry Non-spectroscopic technique The mass to charge ratio of the molecular ion (i.e. the molecular weight) and the fragmentation pattern which may be related to the structure of the molecular ion.