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Orfeo Toolbox
Radiometric corrections

      Stéphane MAY
  stephane.may@cnes.fr




                          orfeo-toolbox.org
                                          1
Radiometry

Radiometry = science of electromagnetic radiations
Interest for Remote Sensing
   Physical interpretation of signals
   Enhance detection
   Estimate physical values related to ground and / or
   atmospheric effects




                                                         orfeo-toolbox.org
                                                                         2
Radiometry : from DN to TOA reflectance
Goal : using physical measures
   TOA reflectance (Top of Atmosphere)
   TOC reflectance (Top of Canopy)
Calibration of images : DN (digital numbers) converted into
TOA reflectance
   Application of calibration coefficient inserted into metadata
   files → Luminance
   Normalisation with solar effect →
   Reflectance
   Example for Spot :



                                                                   orfeo-toolbox.org
                                                                                   3
Luminance




            orfeo-toolbox.org
                            4
Luminance
Definition
   Emitted power per unit area and per unit solid angle
Unit
   W.m-2.sr-1
Numerical example:
   Luminance of the sky (visible): ~ 6 W.m-2.sr-1




                                                          orfeo-toolbox.org
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TOA reflectance




                  orfeo-toolbox.org
                                  6
Radiometry : from TOA reflectance to TOC reflectance
Atmospheric correction : inversion of surface TOC reflectance
   Need to caracterise atmospheric conditions
    ➢TOMS / TOAST data : (grid : 1,25°lon x 1°lat ~ 135 x 110
      km) : stratospheric Ozone amount
      NCEP meteo data : (grid : 2,5°lon x 2,5°lat ~ 270 x 270
      km) : Atmospheric Pressuree, water vapor, wetness
      SeaWiFS or MODIS data : (grid : 5’ x 5’ ~ 9 x 9 km) ) :
      Optical aerosols thickness
      Cimel of aeronet network : information
      about aerosols, and water amount
                                                 Absorption        Ozone
                                                 Scattering                   Cloud

                                                 Emission                      Water vapor
                                                            Molecules

                                                                                  Aerosols
                                                 Reflection                orfeo-toolbox.org
                                                                                             7
Atmospheric effects
Atmosphere
   Thickness ~100 km
  Filter descending and ascending radiations
Composition of the atmosphere:
   Molecules
      nitrogen (78%), oxygen (21%), argon, carbon oxides,
      ozone, water vapor (highly variable, even locally) ...
   Aerosols
      small solid or liquid particles suspended in the
      atmosphere. Microparticles, water particles, ice crystals,
      smoke ...
      Dimensions: mainly from 0.1 to 10 µm
   Abundance and type varies geographically and with time          orfeo-toolbox.org
                                                                                   8
Atmospheric effects
Altitude (km)
                               EXOSPHERE
800


                THERMOSPHERE



                               -90°C
85        Mesopause


                                                      Profil de Températures
                MESOSPHERE




50        Stratopause                                              0°C



                STRATOSPHERE
                               Ozone

10        Tropopause                                       -55°C




                TROPOSPHERE
                                                        Nuages
                                           Aérosols
                               Vapeur
                                d'eau                                     +15°C
  0       Sol

                                                                                  orfeo-toolbox.org
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Atmospheric effects




                      orfeo-toolbox.org
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Atmospheric effects
Three main phenomena, depending of wavelength
   Absorption
   Diffusion (in the visible and NIR, up to ~ 3 µm)
   Emission (in the thermic IR, from ~ 3 µm)
   Optional : refraction, usually neglected for high elevation
   acquisition and not included spatial resolutions greater than
   10 cm
The contribution of the signal from the ground in the measured
signal is disturbed by filtering effects and luminance of the
atmosphere
   Need to correct measures
   Need to understand the phenomena
                                                                   orfeo-toolbox.org
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Radiometry : 6S model
Atmospheric corrections : invert the TOC surface reflectance.
Simulation with radiative transfer code
       6S code
           Diffusion : code of the successive diffusion orders
           Absorptions : O2, CO2, H2O, O3, N2O, CH4
           Spectro data at 10 cm-1« AFGL atmospheric absorption
           line parameters compilation » (1991)
           Look-Up Tables : refl. TOC -> TOA
                     Mesure
       ρTOA
                                Simulations TOA

                               Géo d’observation
                               Conditions atmosphériques
ρTOC
       0      0,01   0,02 0,03                         0,8
                         Valeur sol interpolée                    orfeo-toolbox.org
                                                                                 12
orfeo-toolbox.org
               13
Radiometry : 6S parameters
Atmospheric parameters => parameters of radiative transfer
   The zenithal and azimutal solar angles that describe the
   solar incidence configuration (in degrees)
   The zenithal and azimuthal viewing angles that describe the
   viewing direction (in degrees)
   The month and the day of the acquisition
   The atmospheric pressure
   The water vapor amount, that is, the total water vapor
   content over vertical atmospheric column




                                                                 orfeo-toolbox.org
                                                                                14
Radiometry : 6S parameters
Atmospheric parameters => parameters of radiative transfer
   The ozone amount that is the Stratospheric ozone layer
   content;
      The aerosol model that is the kind of particles (no
      aerosol, continental, maritime, urban, desertic)
      The aerosol optical thickness at 550 nm that is the is the
      Radiative impact of aerosol for the reference wavelength
      550 nm
      The filter function that is the values of the filter function
      for one spectral band, from λinf to λsup by step of 2.5
      nm. One filter function by channel is required. This last
      parameter are read in text files, the other one are directly
      given to the class.                                           orfeo-toolbox.org
                                                                                    15
Radiometry : 6S parameters
Spectral sensitivity file
   Data provided in OTB-Data (not with Monteverdi)
     ➢OTB-Data/Input/Radiometry/
   For each band with a step of 0.25 nm, the spectral band
   sensitivity of the instrument
     ➢Input file : values in the Atmospheric parameters window
     ➢No input file : iso sensitivity (1 everywhere) or default file
       automatically loaded (>OTB V3.10)




                                                                       orfeo-toolbox.org
                                                                                      16
Aeronet data
AERONET (AErosol RObotic NETwork)
  This program is a federation of ground-based remote sensing
  aerosol networks established by NASA and LOA-PHOTONS
  (CNRS) and is greatly expanded by collaborators




                                                           orfeo-toolbox.org
                                                                          17
Aeronet data and OTB

Aerosol optical depth data are computed for three data quality
levels
   Level 1.0 (unscreened)
   Level 1.5 (cloud-screened)
   Level 2.0 (cloud screened and quality-assured).
Extract Aerosol thickness (épaisseur) and Water amount

Download site
   http://aeronet.gsfc.nasa.gov/cgi-bin/webtool_opera_v2_new



                                                           orfeo-toolbox.org
                                                                          18
Radiometry – Reference reflectances

Mesure of the reflectance of a source
   Principle : use a source and measure reflected luminance
    ➢ Direct measure : known source
    ➢ Indirect measure : use of a known reference reflectance
      surface (spectralon, or BaSO4)
   Measures in laboratory
    ➢ Artificial source : directional, mobile (lamp, laser)
    ➢ Sensor (radiometer or spectro-radiometer) : mobile
         Direct measure or indirect measure




                                                                orfeo-toolbox.org
                                                                               19
Radiometry

Spectral signature of the chlorophyllian vegetation


                                        Proche
                         Visible                             Moyen Infra-Rouge
                                     Infra-Rouge


REFLECTION due à :    pigment         Structure
                                                               Teneur en eau
                     de la feuille    cellulaire

ABSORPTION due à :    Chlorophylle                                 Eau




                                            Longueur d’onde (µm)
                                                                                 orfeo-toolbox.org
                                                                                                20
Radiometry processing - Synthesis

3 processing steps
   Digital Number to Luminance
   Luminance to TOA reflectance
  TOA reflectance to TOC surface reflectance
Many parameters available in the metadata of sensors
    Importance of aerosols to quantify the effects of the
    atmosphere
Difficulties
   Aerosol model used?
   Validation of results?
   Ground truth?
                                                            orfeo-toolbox.org
                                                                           21
Optical calibration module (1/2)




                                   orfeo-toolbox.org
                                                  22
Optical calibration module (2/2)




                                   orfeo-toolbox.org
                                                  23
Use case 1 : radiometric correction
Menu File > Open
   ./img_kalideos_reunion/2009-03-21/IMAGERY.TIF
Menu Calibration > Optical calibration
   Load Aeronet file
     ➢ ./aeronet/070101_091231_REUNION_ST_DENIS.lev20
   Load spectral sensity file
     ➢ ./OTB-Data/Input/Radiometry/SPOT5/HRG1/rep6S.dat
   Change correction parameters
   Change Radiative terms
   Save / quit
File > Save (Luminance, TOA, TOC, TOA-TOC files)
Repeat the Calibration process with other parameters set
Visualization > Viewer : compare results
                                                           orfeo-toolbox.org
                                                                          24
Use case 1b : radiometric correction
Use the commande line tool :
   OtbOpticalCalibration-cli -h
   otbOpticalCalibration-cli -in IMAGERY.TIF -out img_toc.tif -level TOC
   -AerosolModel 0 –OzoneAmount 0 --AtmosphericPressure 1030
   --AerosolOptical 0.0329 –WaterVaporAmount 4.226 -aeronet file.lev20
   -srs rep6S.dat




                                                                 orfeo-toolbox.org
                                                                                25
Spectral viewer (1/2)




                        orfeo-toolbox.org
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Spectral viewer (2/2)




                        orfeo-toolbox.org
                                       27
Use case 2 : Spectral viewer
Menu File > Open
   ./img_kalideos_reunion/2009-03-21/IMAGERY.TIF
Menu Viewer > Spectral viewer
   Left click : select your area
   Right click : select pixel
   Spectral angle menu > Select one curve ID
     ➢ Click on Compute button
File > Save (the Spectral angle file). Use Float data type
Create several reference spectral angle images : roads, houses, sea,
clouds, vegetation, bare soil




                                                                 orfeo-toolbox.org
                                                                                28
Monteverdi




Thank you for your attention !




                                 orfeo-toolbox.org
                                                29

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Madagascar2011 - 07 - OTB radiometry processing

  • 1. Orfeo Toolbox Radiometric corrections Stéphane MAY stephane.may@cnes.fr orfeo-toolbox.org 1
  • 2. Radiometry Radiometry = science of electromagnetic radiations Interest for Remote Sensing Physical interpretation of signals Enhance detection Estimate physical values related to ground and / or atmospheric effects orfeo-toolbox.org 2
  • 3. Radiometry : from DN to TOA reflectance Goal : using physical measures TOA reflectance (Top of Atmosphere) TOC reflectance (Top of Canopy) Calibration of images : DN (digital numbers) converted into TOA reflectance Application of calibration coefficient inserted into metadata files → Luminance Normalisation with solar effect → Reflectance Example for Spot : orfeo-toolbox.org 3
  • 4. Luminance orfeo-toolbox.org 4
  • 5. Luminance Definition Emitted power per unit area and per unit solid angle Unit W.m-2.sr-1 Numerical example: Luminance of the sky (visible): ~ 6 W.m-2.sr-1 orfeo-toolbox.org 5
  • 6. TOA reflectance orfeo-toolbox.org 6
  • 7. Radiometry : from TOA reflectance to TOC reflectance Atmospheric correction : inversion of surface TOC reflectance Need to caracterise atmospheric conditions ➢TOMS / TOAST data : (grid : 1,25°lon x 1°lat ~ 135 x 110 km) : stratospheric Ozone amount NCEP meteo data : (grid : 2,5°lon x 2,5°lat ~ 270 x 270 km) : Atmospheric Pressuree, water vapor, wetness SeaWiFS or MODIS data : (grid : 5’ x 5’ ~ 9 x 9 km) ) : Optical aerosols thickness Cimel of aeronet network : information about aerosols, and water amount Absorption Ozone Scattering Cloud Emission Water vapor Molecules Aerosols Reflection orfeo-toolbox.org 7
  • 8. Atmospheric effects Atmosphere Thickness ~100 km Filter descending and ascending radiations Composition of the atmosphere: Molecules nitrogen (78%), oxygen (21%), argon, carbon oxides, ozone, water vapor (highly variable, even locally) ... Aerosols small solid or liquid particles suspended in the atmosphere. Microparticles, water particles, ice crystals, smoke ... Dimensions: mainly from 0.1 to 10 µm Abundance and type varies geographically and with time orfeo-toolbox.org 8
  • 9. Atmospheric effects Altitude (km) EXOSPHERE 800 THERMOSPHERE -90°C 85 Mesopause Profil de Températures MESOSPHERE 50 Stratopause 0°C STRATOSPHERE Ozone 10 Tropopause -55°C TROPOSPHERE Nuages Aérosols Vapeur d'eau +15°C 0 Sol orfeo-toolbox.org 9
  • 10. Atmospheric effects orfeo-toolbox.org 10
  • 11. Atmospheric effects Three main phenomena, depending of wavelength Absorption Diffusion (in the visible and NIR, up to ~ 3 µm) Emission (in the thermic IR, from ~ 3 µm) Optional : refraction, usually neglected for high elevation acquisition and not included spatial resolutions greater than 10 cm The contribution of the signal from the ground in the measured signal is disturbed by filtering effects and luminance of the atmosphere Need to correct measures Need to understand the phenomena orfeo-toolbox.org 11
  • 12. Radiometry : 6S model Atmospheric corrections : invert the TOC surface reflectance. Simulation with radiative transfer code 6S code Diffusion : code of the successive diffusion orders Absorptions : O2, CO2, H2O, O3, N2O, CH4 Spectro data at 10 cm-1« AFGL atmospheric absorption line parameters compilation » (1991) Look-Up Tables : refl. TOC -> TOA Mesure ρTOA Simulations TOA Géo d’observation Conditions atmosphériques ρTOC 0 0,01 0,02 0,03 0,8 Valeur sol interpolée orfeo-toolbox.org 12
  • 14. Radiometry : 6S parameters Atmospheric parameters => parameters of radiative transfer The zenithal and azimutal solar angles that describe the solar incidence configuration (in degrees) The zenithal and azimuthal viewing angles that describe the viewing direction (in degrees) The month and the day of the acquisition The atmospheric pressure The water vapor amount, that is, the total water vapor content over vertical atmospheric column orfeo-toolbox.org 14
  • 15. Radiometry : 6S parameters Atmospheric parameters => parameters of radiative transfer The ozone amount that is the Stratospheric ozone layer content; The aerosol model that is the kind of particles (no aerosol, continental, maritime, urban, desertic) The aerosol optical thickness at 550 nm that is the is the Radiative impact of aerosol for the reference wavelength 550 nm The filter function that is the values of the filter function for one spectral band, from λinf to λsup by step of 2.5 nm. One filter function by channel is required. This last parameter are read in text files, the other one are directly given to the class. orfeo-toolbox.org 15
  • 16. Radiometry : 6S parameters Spectral sensitivity file Data provided in OTB-Data (not with Monteverdi) ➢OTB-Data/Input/Radiometry/ For each band with a step of 0.25 nm, the spectral band sensitivity of the instrument ➢Input file : values in the Atmospheric parameters window ➢No input file : iso sensitivity (1 everywhere) or default file automatically loaded (>OTB V3.10) orfeo-toolbox.org 16
  • 17. Aeronet data AERONET (AErosol RObotic NETwork) This program is a federation of ground-based remote sensing aerosol networks established by NASA and LOA-PHOTONS (CNRS) and is greatly expanded by collaborators orfeo-toolbox.org 17
  • 18. Aeronet data and OTB Aerosol optical depth data are computed for three data quality levels Level 1.0 (unscreened) Level 1.5 (cloud-screened) Level 2.0 (cloud screened and quality-assured). Extract Aerosol thickness (épaisseur) and Water amount Download site http://aeronet.gsfc.nasa.gov/cgi-bin/webtool_opera_v2_new orfeo-toolbox.org 18
  • 19. Radiometry – Reference reflectances Mesure of the reflectance of a source Principle : use a source and measure reflected luminance ➢ Direct measure : known source ➢ Indirect measure : use of a known reference reflectance surface (spectralon, or BaSO4) Measures in laboratory ➢ Artificial source : directional, mobile (lamp, laser) ➢ Sensor (radiometer or spectro-radiometer) : mobile Direct measure or indirect measure orfeo-toolbox.org 19
  • 20. Radiometry Spectral signature of the chlorophyllian vegetation Proche Visible Moyen Infra-Rouge Infra-Rouge REFLECTION due à : pigment Structure Teneur en eau de la feuille cellulaire ABSORPTION due à : Chlorophylle Eau Longueur d’onde (µm) orfeo-toolbox.org 20
  • 21. Radiometry processing - Synthesis 3 processing steps Digital Number to Luminance Luminance to TOA reflectance TOA reflectance to TOC surface reflectance Many parameters available in the metadata of sensors Importance of aerosols to quantify the effects of the atmosphere Difficulties Aerosol model used? Validation of results? Ground truth? orfeo-toolbox.org 21
  • 22. Optical calibration module (1/2) orfeo-toolbox.org 22
  • 23. Optical calibration module (2/2) orfeo-toolbox.org 23
  • 24. Use case 1 : radiometric correction Menu File > Open ./img_kalideos_reunion/2009-03-21/IMAGERY.TIF Menu Calibration > Optical calibration Load Aeronet file ➢ ./aeronet/070101_091231_REUNION_ST_DENIS.lev20 Load spectral sensity file ➢ ./OTB-Data/Input/Radiometry/SPOT5/HRG1/rep6S.dat Change correction parameters Change Radiative terms Save / quit File > Save (Luminance, TOA, TOC, TOA-TOC files) Repeat the Calibration process with other parameters set Visualization > Viewer : compare results orfeo-toolbox.org 24
  • 25. Use case 1b : radiometric correction Use the commande line tool : OtbOpticalCalibration-cli -h otbOpticalCalibration-cli -in IMAGERY.TIF -out img_toc.tif -level TOC -AerosolModel 0 –OzoneAmount 0 --AtmosphericPressure 1030 --AerosolOptical 0.0329 –WaterVaporAmount 4.226 -aeronet file.lev20 -srs rep6S.dat orfeo-toolbox.org 25
  • 26. Spectral viewer (1/2) orfeo-toolbox.org 26
  • 27. Spectral viewer (2/2) orfeo-toolbox.org 27
  • 28. Use case 2 : Spectral viewer Menu File > Open ./img_kalideos_reunion/2009-03-21/IMAGERY.TIF Menu Viewer > Spectral viewer Left click : select your area Right click : select pixel Spectral angle menu > Select one curve ID ➢ Click on Compute button File > Save (the Spectral angle file). Use Float data type Create several reference spectral angle images : roads, houses, sea, clouds, vegetation, bare soil orfeo-toolbox.org 28
  • 29. Monteverdi Thank you for your attention ! orfeo-toolbox.org 29