SlideShare a Scribd company logo
1 of 12
Rod Page @rdmpage
http://iphylo.blogspot.com
Holly Bik @hollybik
Let’s rise up to unite taxonomy and technology
10.1371/journal.pbio.2002231
http://ispecies.org
Simple Javascript mashupDBpedia
GBIF
CrossRef
EOL
Open Tree of Life
TreeBASE
https://doi.org/10.7717/peerj.190
Obstacles to building knowledge
graphs
•Technical
•Social
Obstacles to building knowledge
graphs
• Need globally unique, persistent
identifiers (how to label the nodes of the
graph)
• Need to create and agree on vocabularies
(how to label the edges of the graph)
• Need to agree how to transmit the graph
• Who stores the global graph?
A new hope…
• The identifier wars are (nearly) over (DOIs FTW)
• Lots of domain-specific vocabularies, but
schema.org is “good enough” for most things
• XML becoming a bedtime story to frighten the
children, JSON is everywhere (JSON-LD FTW).
• Wikidata
Obstacles to building knowledge
graphs
• Technical
• Social Economic
How do we measure progress?
before
now
now
before
Linear growth (easy) Connectivity (hard)
The knowledge graph
is already here
(it’s just not evenly distributed)
William Gibson @GreatDismal
We will need to ensure our
knowledge graph is free, open, and
used for good

More Related Content

Similar to SLiDInG6 talk on biodiversity knowledge graph

MARC and BIBFRAME; Linking libraries and archives
MARC and BIBFRAME; Linking libraries and archivesMARC and BIBFRAME; Linking libraries and archives
MARC and BIBFRAME; Linking libraries and archives
Dorothea Salo
 
Semantic Web: In Quest for the Next Generation Killer Apps
Semantic Web: In Quest for the Next Generation Killer AppsSemantic Web: In Quest for the Next Generation Killer Apps
Semantic Web: In Quest for the Next Generation Killer Apps
Jie Bao
 
Web 2.0 storytelling overview
Web 2.0 storytelling overviewWeb 2.0 storytelling overview
Web 2.0 storytelling overview
Bryan Alexander
 

Similar to SLiDInG6 talk on biodiversity knowledge graph (20)

If OLPC started today... JSConf.is
If OLPC started today... JSConf.isIf OLPC started today... JSConf.is
If OLPC started today... JSConf.is
 
Interactive Visualizations for teaching, research, and dissemination
Interactive Visualizations for teaching, research, and disseminationInteractive Visualizations for teaching, research, and dissemination
Interactive Visualizations for teaching, research, and dissemination
 
groovy & grails - lecture 1
groovy & grails - lecture 1groovy & grails - lecture 1
groovy & grails - lecture 1
 
MARC and BIBFRAME; Linking libraries and archives
MARC and BIBFRAME; Linking libraries and archivesMARC and BIBFRAME; Linking libraries and archives
MARC and BIBFRAME; Linking libraries and archives
 
Semantic Web: In Quest for the Next Generation Killer Apps
Semantic Web: In Quest for the Next Generation Killer AppsSemantic Web: In Quest for the Next Generation Killer Apps
Semantic Web: In Quest for the Next Generation Killer Apps
 
More than a 1000 words
More than a 1000 wordsMore than a 1000 words
More than a 1000 words
 
Publishing and Consuming FAIR Data A Case in the Agri-Food Domain
Publishing and Consuming FAIR DataA Case in the Agri-Food DomainPublishing and Consuming FAIR DataA Case in the Agri-Food Domain
Publishing and Consuming FAIR Data A Case in the Agri-Food Domain
 
Semantic Search with Semantic Web
Semantic Search with Semantic WebSemantic Search with Semantic Web
Semantic Search with Semantic Web
 
Understanding Artificial Intelligence
Understanding Artificial Intelligence Understanding Artificial Intelligence
Understanding Artificial Intelligence
 
What is New in W3C land?
What is New in W3C land?What is New in W3C land?
What is New in W3C land?
 
RBMS LODLAM presentation
RBMS LODLAM presentationRBMS LODLAM presentation
RBMS LODLAM presentation
 
Knowledge Technologies: Opportunities and Challenges
Knowledge Technologies: Opportunities and ChallengesKnowledge Technologies: Opportunities and Challenges
Knowledge Technologies: Opportunities and Challenges
 
Big Data Overview/Teaser (6 Aug 2013)
Big Data Overview/Teaser (6 Aug 2013)Big Data Overview/Teaser (6 Aug 2013)
Big Data Overview/Teaser (6 Aug 2013)
 
Question Answering - Application and Challenges
Question Answering - Application and ChallengesQuestion Answering - Application and Challenges
Question Answering - Application and Challenges
 
DMDS Winter 2015 Workshop 1 slides
DMDS Winter 2015 Workshop 1 slidesDMDS Winter 2015 Workshop 1 slides
DMDS Winter 2015 Workshop 1 slides
 
Beautifying Data in the real world
Beautifying Data in the real worldBeautifying Data in the real world
Beautifying Data in the real world
 
A Lightning Introduction To Clouds & HLT - Human Language Technology Conference
A Lightning Introduction To Clouds & HLT - Human Language Technology ConferenceA Lightning Introduction To Clouds & HLT - Human Language Technology Conference
A Lightning Introduction To Clouds & HLT - Human Language Technology Conference
 
Web 2.0 storytelling overview
Web 2.0 storytelling overviewWeb 2.0 storytelling overview
Web 2.0 storytelling overview
 
Linked Data: The Real Web 2.0 (from 2008)
Linked Data: The Real Web 2.0 (from 2008)Linked Data: The Real Web 2.0 (from 2008)
Linked Data: The Real Web 2.0 (from 2008)
 
Common Core in the Cloud 2013: College & Career Readiness & Common Core natio...
Common Core in the Cloud 2013: College & Career Readiness & Common Core natio...Common Core in the Cloud 2013: College & Career Readiness & Common Core natio...
Common Core in the Cloud 2013: College & Career Readiness & Common Core natio...
 

More from Roderic Page

GrBio Workshop talk
GrBio Workshop talkGrBio Workshop talk
GrBio Workshop talk
Roderic Page
 
Biodiversity Knowledge Graphs
Biodiversity Knowledge GraphsBiodiversity Knowledge Graphs
Biodiversity Knowledge Graphs
Roderic Page
 
GBIF Science Committee Report GB21, Delhi, India
GBIF Science Committee Report GB21, Delhi, IndiaGBIF Science Committee Report GB21, Delhi, India
GBIF Science Committee Report GB21, Delhi, India
Roderic Page
 

More from Roderic Page (20)

ALEC (A List of Everything Cool)
ALEC (A List of Everything Cool)ALEC (A List of Everything Cool)
ALEC (A List of Everything Cool)
 
Wikidata and the Biodiversity Knowledge Graph
Wikidata and the Biodiversity Knowledge GraphWikidata and the Biodiversity Knowledge Graph
Wikidata and the Biodiversity Knowledge Graph
 
BioStor Next
BioStor NextBioStor Next
BioStor Next
 
Ozymandias - from an atlas to a knowledge graph of living Australia
Ozymandias - from an atlas to a knowledge graph of living AustraliaOzymandias - from an atlas to a knowledge graph of living Australia
Ozymandias - from an atlas to a knowledge graph of living Australia
 
Wild idea for TDWG17 Bitcoins, biodiversity and micropayments
Wild idea for TDWG17 Bitcoins, biodiversity and micropaymentsWild idea for TDWG17 Bitcoins, biodiversity and micropayments
Wild idea for TDWG17 Bitcoins, biodiversity and micropayments
 
The Sam Adams talk
The Sam Adams talkThe Sam Adams talk
The Sam Adams talk
 
Unknown knowns, long tails, and long data
Unknown knowns, long tails, and long dataUnknown knowns, long tails, and long data
Unknown knowns, long tails, and long data
 
In praise of grumpy old men: Open versus closed data and the challenge of cre...
In praise of grumpy old men: Open versus closed data and the challenge of cre...In praise of grumpy old men: Open versus closed data and the challenge of cre...
In praise of grumpy old men: Open versus closed data and the challenge of cre...
 
BHL, BioStor, and beyond
BHL, BioStor, and beyondBHL, BioStor, and beyond
BHL, BioStor, and beyond
 
Cisco Digital Catapult
Cisco Digital CatapultCisco Digital Catapult
Cisco Digital Catapult
 
Built in the 19th century, rebuilt for the 21st
Built in the 19th century, rebuilt for the 21stBuilt in the 19th century, rebuilt for the 21st
Built in the 19th century, rebuilt for the 21st
 
Two graphs, three responses
Two graphs, three responsesTwo graphs, three responses
Two graphs, three responses
 
GrBio Workshop talk
GrBio Workshop talkGrBio Workshop talk
GrBio Workshop talk
 
Biodiversity Knowledge Graphs
Biodiversity Knowledge GraphsBiodiversity Knowledge Graphs
Biodiversity Knowledge Graphs
 
Visualing phylogenies: a personal view
Visualing phylogenies: a personal viewVisualing phylogenies: a personal view
Visualing phylogenies: a personal view
 
Biodiversity informatics: digitising the living world
Biodiversity informatics: digitising the living worldBiodiversity informatics: digitising the living world
Biodiversity informatics: digitising the living world
 
Ebbe Nielsen Challenge GBIF #gb21
Ebbe Nielsen Challenge GBIF #gb21Ebbe Nielsen Challenge GBIF #gb21
Ebbe Nielsen Challenge GBIF #gb21
 
GBIF Science Committee Report GB21, Delhi, India
GBIF Science Committee Report GB21, Delhi, IndiaGBIF Science Committee Report GB21, Delhi, India
GBIF Science Committee Report GB21, Delhi, India
 
Building the Biodiversity Knowledge Graph
Building the Biodiversity Knowledge GraphBuilding the Biodiversity Knowledge Graph
Building the Biodiversity Knowledge Graph
 
GBIF ideas
GBIF ideasGBIF ideas
GBIF ideas
 

Recently uploaded

Digital Dentistry.Digital Dentistryvv.pptx
Digital Dentistry.Digital Dentistryvv.pptxDigital Dentistry.Digital Dentistryvv.pptx
Digital Dentistry.Digital Dentistryvv.pptx
MohamedFarag457087
 
+971581248768>> SAFE AND ORIGINAL ABORTION PILLS FOR SALE IN DUBAI AND ABUDHA...
+971581248768>> SAFE AND ORIGINAL ABORTION PILLS FOR SALE IN DUBAI AND ABUDHA...+971581248768>> SAFE AND ORIGINAL ABORTION PILLS FOR SALE IN DUBAI AND ABUDHA...
+971581248768>> SAFE AND ORIGINAL ABORTION PILLS FOR SALE IN DUBAI AND ABUDHA...
?#DUbAI#??##{{(☎️+971_581248768%)**%*]'#abortion pills for sale in dubai@
 
Asymmetry in the atmosphere of the ultra-hot Jupiter WASP-76 b
Asymmetry in the atmosphere of the ultra-hot Jupiter WASP-76 bAsymmetry in the atmosphere of the ultra-hot Jupiter WASP-76 b
Asymmetry in the atmosphere of the ultra-hot Jupiter WASP-76 b
Sérgio Sacani
 
Bacterial Identification and Classifications
Bacterial Identification and ClassificationsBacterial Identification and Classifications
Bacterial Identification and Classifications
Areesha Ahmad
 

Recently uploaded (20)

Digital Dentistry.Digital Dentistryvv.pptx
Digital Dentistry.Digital Dentistryvv.pptxDigital Dentistry.Digital Dentistryvv.pptx
Digital Dentistry.Digital Dentistryvv.pptx
 
Locating and isolating a gene, FISH, GISH, Chromosome walking and jumping, te...
Locating and isolating a gene, FISH, GISH, Chromosome walking and jumping, te...Locating and isolating a gene, FISH, GISH, Chromosome walking and jumping, te...
Locating and isolating a gene, FISH, GISH, Chromosome walking and jumping, te...
 
Site Acceptance Test .
Site Acceptance Test                    .Site Acceptance Test                    .
Site Acceptance Test .
 
Sector 62, Noida Call girls :8448380779 Model Escorts | 100% verified
Sector 62, Noida Call girls :8448380779 Model Escorts | 100% verifiedSector 62, Noida Call girls :8448380779 Model Escorts | 100% verified
Sector 62, Noida Call girls :8448380779 Model Escorts | 100% verified
 
PSYCHOSOCIAL NEEDS. in nursing II sem pptx
PSYCHOSOCIAL NEEDS. in nursing II sem pptxPSYCHOSOCIAL NEEDS. in nursing II sem pptx
PSYCHOSOCIAL NEEDS. in nursing II sem pptx
 
High Profile 🔝 8250077686 📞 Call Girls Service in GTB Nagar🍑
High Profile 🔝 8250077686 📞 Call Girls Service in GTB Nagar🍑High Profile 🔝 8250077686 📞 Call Girls Service in GTB Nagar🍑
High Profile 🔝 8250077686 📞 Call Girls Service in GTB Nagar🍑
 
GBSN - Microbiology (Unit 1)
GBSN - Microbiology (Unit 1)GBSN - Microbiology (Unit 1)
GBSN - Microbiology (Unit 1)
 
Kochi ❤CALL GIRL 84099*07087 ❤CALL GIRLS IN Kochi ESCORT SERVICE❤CALL GIRL
Kochi ❤CALL GIRL 84099*07087 ❤CALL GIRLS IN Kochi ESCORT SERVICE❤CALL GIRLKochi ❤CALL GIRL 84099*07087 ❤CALL GIRLS IN Kochi ESCORT SERVICE❤CALL GIRL
Kochi ❤CALL GIRL 84099*07087 ❤CALL GIRLS IN Kochi ESCORT SERVICE❤CALL GIRL
 
+971581248768>> SAFE AND ORIGINAL ABORTION PILLS FOR SALE IN DUBAI AND ABUDHA...
+971581248768>> SAFE AND ORIGINAL ABORTION PILLS FOR SALE IN DUBAI AND ABUDHA...+971581248768>> SAFE AND ORIGINAL ABORTION PILLS FOR SALE IN DUBAI AND ABUDHA...
+971581248768>> SAFE AND ORIGINAL ABORTION PILLS FOR SALE IN DUBAI AND ABUDHA...
 
FAIRSpectra - Enabling the FAIRification of Spectroscopy and Spectrometry
FAIRSpectra - Enabling the FAIRification of Spectroscopy and SpectrometryFAIRSpectra - Enabling the FAIRification of Spectroscopy and Spectrometry
FAIRSpectra - Enabling the FAIRification of Spectroscopy and Spectrometry
 
GBSN - Microbiology (Unit 2)
GBSN - Microbiology (Unit 2)GBSN - Microbiology (Unit 2)
GBSN - Microbiology (Unit 2)
 
Factory Acceptance Test( FAT).pptx .
Factory Acceptance Test( FAT).pptx       .Factory Acceptance Test( FAT).pptx       .
Factory Acceptance Test( FAT).pptx .
 
COST ESTIMATION FOR A RESEARCH PROJECT.pptx
COST ESTIMATION FOR A RESEARCH PROJECT.pptxCOST ESTIMATION FOR A RESEARCH PROJECT.pptx
COST ESTIMATION FOR A RESEARCH PROJECT.pptx
 
Clean In Place(CIP).pptx .
Clean In Place(CIP).pptx                 .Clean In Place(CIP).pptx                 .
Clean In Place(CIP).pptx .
 
300003-World Science Day For Peace And Development.pptx
300003-World Science Day For Peace And Development.pptx300003-World Science Day For Peace And Development.pptx
300003-World Science Day For Peace And Development.pptx
 
Dubai Call Girls Beauty Face Teen O525547819 Call Girls Dubai Young
Dubai Call Girls Beauty Face Teen O525547819 Call Girls Dubai YoungDubai Call Girls Beauty Face Teen O525547819 Call Girls Dubai Young
Dubai Call Girls Beauty Face Teen O525547819 Call Girls Dubai Young
 
FAIRSpectra - Enabling the FAIRification of Analytical Science
FAIRSpectra - Enabling the FAIRification of Analytical ScienceFAIRSpectra - Enabling the FAIRification of Analytical Science
FAIRSpectra - Enabling the FAIRification of Analytical Science
 
Asymmetry in the atmosphere of the ultra-hot Jupiter WASP-76 b
Asymmetry in the atmosphere of the ultra-hot Jupiter WASP-76 bAsymmetry in the atmosphere of the ultra-hot Jupiter WASP-76 b
Asymmetry in the atmosphere of the ultra-hot Jupiter WASP-76 b
 
9999266834 Call Girls In Noida Sector 22 (Delhi) Call Girl Service
9999266834 Call Girls In Noida Sector 22 (Delhi) Call Girl Service9999266834 Call Girls In Noida Sector 22 (Delhi) Call Girl Service
9999266834 Call Girls In Noida Sector 22 (Delhi) Call Girl Service
 
Bacterial Identification and Classifications
Bacterial Identification and ClassificationsBacterial Identification and Classifications
Bacterial Identification and Classifications
 

SLiDInG6 talk on biodiversity knowledge graph

Editor's Notes

  1. https://doi.org/10.1371/journal.pbio.2002231
  2. http://ispecies.org
  3. https://doi.org/10.7717/peerj.190
  4. https://ontotext.com/knowledgehub/case-studies/sn-scigraph-uses-graphdb/. Springer SciGraph https://twitter.com/OntotextGraphDB/status/898143878724935681