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Cover slide TAPIR  P yWrapper The third generation PyWrapper October 15, 2007 NODES9, GB14, Amsterdam Dag Terje Filip Endresen Nordic Gene Bank (Sweden) Bioversity International (Italy)
TOPICS ,[object Object],[object Object]
[object Object]
TDWG Access Protocol for Information Retrieval - TAPIR ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
[object Object]
PyWrapper3 ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
PyWrapper Provider Software ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Installation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Installation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Installation
PyWrapper configuration ,[object Object],[object Object],[object Object],[object Object],[object Object],[http://trac.pywrapper.org/pywrapper/wiki/Documentation] [http://trac.pywrapper.org/pywrapper/wiki/DraftInstallationGuide]
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Start PyWrapper
[object Object],Configuration
BioCASE Install third party software [ http://localhost/pywrapper/utilities/testlibs.cgi  ] Follow the links from the Library test page.  The column for installed version will display the installed version after successful installation. ,[object Object],[object Object],[object Object],[object Object]
Example of a service request ,[object Object]
Example of a service response
Example 2, service request
Example 2, service response singer:/sourcename singer:/taxonomy/genus singer:/taxonomy/species singer:/taxonomy/subspecies singer:/holding/ID singer:/holding/name singer:/origin/collecting/countrysource singer:/origin/collecting/countrysourceID singer:/status/biologicalstatus singer:/status/biologicalstatusID ...
Taxonomic Database Working Group ,[object Object],[object Object],[object Object],[object Object]
PyWrapper/BioCASE  [http://www.pywrapper.org/] ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],CVS
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],W3C :: LSID
Distributed BioCASE/PyWrapper network
Special thanks to ,[object Object],[object Object],[object Object],[object Object]
Germplasm data indexing tools ,[object Object],[object Object],[object Object],[object Object]
Thank you for listening!

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TAPIR PyWrapper3, at GBIF GB14 nodes meeting (2007)

  • 1. Cover slide TAPIR P yWrapper The third generation PyWrapper October 15, 2007 NODES9, GB14, Amsterdam Dag Terje Filip Endresen Nordic Gene Bank (Sweden) Bioversity International (Italy)
  • 2.
  • 3.
  • 4.
  • 5.
  • 6.
  • 7.
  • 8.
  • 9.
  • 10.
  • 11.
  • 12.
  • 13.
  • 14.
  • 15.
  • 16. Example of a service response
  • 18. Example 2, service response singer:/sourcename singer:/taxonomy/genus singer:/taxonomy/species singer:/taxonomy/subspecies singer:/holding/ID singer:/holding/name singer:/origin/collecting/countrysource singer:/origin/collecting/countrysourceID singer:/status/biologicalstatus singer:/status/biologicalstatusID ...
  • 19.
  • 20.
  • 21.
  • 23.
  • 24.
  • 25. Thank you for listening!

Notas del editor

  1. Some keywords; the main topics of the talk
  2. http://commons.wikimedia.org/wiki/Image:Tapir_hooves.jpg
  3. http://commons.wikimedia.org/wiki/Image:Central_American_Tapir-Belize20.jpg
  4. http://commons.wikimedia.org/wiki/Image:Milton_Tapir_sniffing.JPG
  5. http://commons.wikimedia.org/wiki/Image:Python_molure_13.JPG
  6. http://commons.wikimedia.org/wiki/Image:Dusit_zoo_tapir.jpg
  7. Photo: Field been from Boreal, accession NGB11518, 2005-03-05, Dag Endresen [http://r142b.ngb.se/ngb/2005-03--the-making-of-seeds-pictures/index.php?offset=19&size=medium&stp=1]
  8. Photo: Field been from Boreal, accession NGB11518, 2005-03-05, Dag Endresen [http://r142b.ngb.se/ngb/2005-03--the-making-of-seeds-pictures/index.php?offset=19&size=medium&stp=1]
  9. Photo: Field been from Boreal, accession NGB11518, 2005-03-05, Dag Endresen [http://r142b.ngb.se/ngb/2005-03--the-making-of-seeds-pictures/index.php?offset=19&size=medium&stp=1]
  10. http://tapir.grinfo.net/queryforms/qf_tapir.cgi?url=http://tapir.grinfo.net//pywrapper.cgi?dsa=SINGER <?xml version='1.0' encoding='UTF-8'?> <request> <header /> <inventory count='true' start='0' limit='40' xmlns:singer='http://singer.grinfo.net/schema/SINGER-1.0' > <concepts> <concept path='singer:/sourcename'/> <concept path='singer:/taxonomy/genus' /> <concept path='singer:/taxonomy/species' /> <concept path='singer:/taxonomy/subspecies' /> <concept path='singer:/holding/ID' /> <concept path='singer:/holding/name' /> <concept path='singer:/origin/collecting/countrysource' /> <concept path='singer:/origin/collecting/countrysourceID' /> <concept path='singer:/status/biologicalstatus' /> <concept path='singer:/status/biologicalstatusID' /> </concepts> <filter> <like> <concept path='singer:/taxonomy/genus' /> <literal value='cice*' /> </like> </filter> </inventory> </request>
  11. http://tapir.grinfo.net/queryforms/qf_tapir.cgi?url=http://tapir.grinfo.net//pywrapper.cgi?dsa=SINGER http://apps3.fao.org/wiews/wiews.jsp
  12. * Illustration: Corn earworm pupae that will be used to produce control parasites for release in the field. Photo by Scott Bauer. [http://www.ars.usda.gov/is/graphics/photos/k5554-2.htm]
  13. OMG-LSR, Object Management Group – Life Science Research [http://www.omg.org/lsr/]
  14. http://www.biocase.org/whats_biocase/unit_net.shtml
  15. Arnica montana SPIMED Medicinal plants , Photographer Katarina Wdelsbäck (NGB Picture Archive, image 003907)
  16. Image: Field of wheat at Alnarp. Photographer Dag Terje Endresen (NGB Picture Archive, image 002981) Image: Spider in a spiderweb Image: Dag Terje Filip Endresen in Benin Image: Michael Mackay