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RESEARCH POSTER PRESENTATION DESIGN © 2011
www.PosterPresentations.com
For our secondary screen we tested selected mutants’
motility on soft agar motility plates.
Characterization of the Role of plzC in Motility Regulation of
Vibrio cholerae
PlzC is a c-di-GMP receptor that is important for controlling
motility, biofilm, and virulence in Vibrio cholerae. These type of
receptors convey information through protein-protein interactions.
In this study we designed a forward genetics approach to identify
repressors of motility that might interact with PlzC.
Abstract	
  
Introduc6on	
  
The objective of this study was to determine proteins that may be
interacting with PlzC and affecting motility.
Objec6ve	
  
We used
transposon
mutagenesis to
introduce random
null mutations
into the ΔplzC
genetic
background.
Results	
   Perspec6ve	
  
References	
  
C-di-GMP is an important secondary intracellular signaling
molecule for Vibrio cholerae, and many other bacteria. It is
synthesized by digaunylate cyclases (DGCs) and degraded by
phosphodiesterases (PDEs). A high internal concentration of c-di-
GMP promotes the formation of biofilms. A low internal
concentration of c-di-GMP promotes motility.
University	
  of	
  California	
  –	
  Santa	
  Cruz	
  
Livia	
  Timpanaro-­‐PerroJa,	
  Mauro	
  Salinas,	
  David	
  Zamorano-­‐Sánchez,	
  Fitnat	
  Yildiz	
  
Methods	
  
Primary Investigator: Fitnat Yildiz, Ph.D.
Post-doctoral Researchers: David Zamorano-Sánchez, Ph.D.,
Namrata Rao, Ph.D.
Research Technicians: Mauro Salinas
We then performed a series of motility screens to determine
secondary mutations that restored motility to a wild-type (WT)
phenotype. We used Arbitrary PCR and DNA Sequencing to
determine where the transposon had inserted.
ΔRR	
  
Screened: 4,076
Selected: 235
Sequenced: 33
Selected for Clean Deletions: 9
•  Do Clean Deletions to recapitulate the motility phenotype
•  Do Epistatic Analysis
•  Do Bacterial Two Hybrid Assay to show protein-protein
interactions
•  Evaluate the role of c-di-GMP in the interactions
Acknowledgements	
  
1.73	
  
1.6	
   1.63	
  1.63	
  
1.43	
  
2.17	
  
2.13	
  
2.3	
  
2.1	
  
1.63	
  
2.25	
  2.25	
  
2.07	
  
1.68	
  
1.6	
   1.6	
  
2.35	
  
2.47	
  
2.37	
  
2.16	
  2.17	
  
2.33	
  
2.53	
  
2.43	
  
1.78	
  
2.23	
  
1.53	
  
2.18	
  
1.6	
  
2.52	
  
2.35	
  
2.63	
  
2.3	
  
1.57	
  
1.759	
  
0	
  
0.5	
  
1	
  
1.5	
  
2	
  
2.5	
  
3	
  
Colony	
  Measurements	
  (cm)	
  
Mutant	
  
ΔplzC	
  	
  Mo6lity	
  Screen	
  
PlzC	
  
?	
  
An in-frame deletion of the c-di-GMP receptor plzC causes a
decrease in motility of Vibrio cholerae in soft agar plates. This
would suggest that PlzC is inhibiting a repressor of motility.
Since c-di-GMP has been shown to inhibit motility we speculate
that in the presence of this second messenger PlzC wont be
able to repress the hypothetical motility repressor.
Our primary screen was done in a 96-well format stamping
cells grown on selective liquid media over soft agar plates.
Examples of a
non-selected and
selected mutants
Controls: ΔplzC SWT
We did arbitrary PCR to determine the gene responsible for
the suppressor mutation.
1.PraJ,	
  J.	
  T.,	
  R.	
  Tamayo,	
  A.	
  D.	
  Tischler,	
  and	
  A.	
  Camilli.	
  "PilZ	
  Domain	
  
Proteins	
  Bind	
  Cyclic	
  Diguanylate	
  and	
  Regulate	
  Diverse	
  Processes	
  in	
  Vibrio	
  
Cholerae."	
  Journal	
  of	
  Biological	
  Chemistry	
  282.17	
  (2007):	
  12860-­‐2870.	
  Print.	
  
2.	
  Sondermann,	
  Holger;	
  Shikuma,	
  Nicholas	
  J.;	
  Yildiz,	
  Fitnat	
  H.	
  ,	
  “You’ve	
  
come	
  a	
  long	
  way:	
  c-­‐di-­‐GMP	
  signaling.”	
  Current	
  Opinion	
  in	
  Microbiology	
  
(2012):	
  14-­‐146.	
  	
  
3. Ko,	
  Junsang,	
  Kyoung-­‐Seok	
  Ryu,	
  Henna	
  Kim,	
  Jae-­‐Sun	
  Shin,	
  Jie-­‐Oh	
  Lee,	
  
Chaejoon	
  Cheong,	
  and	
  Byong-­‐Seok	
  Choi.	
  "Structure	
  of	
  PP4397	
  Reveals	
  the	
  
Molecular	
  Basis	
  for	
  Different	
  C-­‐di-­‐GMP	
  Binding	
  Modes	
  by	
  Pilz	
  Domain	
  
Proteins."	
  Journal	
  of	
  Molecular	
  Biology:	
  97-­‐110.	
  Print.	
  	
  
4.	
  Liu,	
  X.,	
  Beyhan,	
  S.,	
  Lim,	
  B.,	
  Linington,	
  R.	
  G.,	
  &	
  Yildiz,	
  F.	
  H.	
  (2010).	
  
Iden.fica.on	
  and	
  Characteriza.on	
  of	
  a	
  Phosphodiesterase	
  That	
  Inversely	
  
Regulates	
  Mo.lity	
  and	
  Biofilm	
  Forma.on	
  in	
  Vibrio	
  cholerae	
  .	
  Journal	
  of	
  
Bacteriology,	
  192(18),	
  4541–4552.	
  doi:10.1128/JB.00209-­‐10	
  
Wt	
   ΔplzC	
  
Wt	
   ΔplzC	
  

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Livia's Undergraduate Research Symposium Poster 2015

  • 1. RESEARCH POSTER PRESENTATION DESIGN © 2011 www.PosterPresentations.com For our secondary screen we tested selected mutants’ motility on soft agar motility plates. Characterization of the Role of plzC in Motility Regulation of Vibrio cholerae PlzC is a c-di-GMP receptor that is important for controlling motility, biofilm, and virulence in Vibrio cholerae. These type of receptors convey information through protein-protein interactions. In this study we designed a forward genetics approach to identify repressors of motility that might interact with PlzC. Abstract   Introduc6on   The objective of this study was to determine proteins that may be interacting with PlzC and affecting motility. Objec6ve   We used transposon mutagenesis to introduce random null mutations into the ΔplzC genetic background. Results   Perspec6ve   References   C-di-GMP is an important secondary intracellular signaling molecule for Vibrio cholerae, and many other bacteria. It is synthesized by digaunylate cyclases (DGCs) and degraded by phosphodiesterases (PDEs). A high internal concentration of c-di- GMP promotes the formation of biofilms. A low internal concentration of c-di-GMP promotes motility. University  of  California  –  Santa  Cruz   Livia  Timpanaro-­‐PerroJa,  Mauro  Salinas,  David  Zamorano-­‐Sánchez,  Fitnat  Yildiz   Methods   Primary Investigator: Fitnat Yildiz, Ph.D. Post-doctoral Researchers: David Zamorano-Sánchez, Ph.D., Namrata Rao, Ph.D. Research Technicians: Mauro Salinas We then performed a series of motility screens to determine secondary mutations that restored motility to a wild-type (WT) phenotype. We used Arbitrary PCR and DNA Sequencing to determine where the transposon had inserted. ΔRR   Screened: 4,076 Selected: 235 Sequenced: 33 Selected for Clean Deletions: 9 •  Do Clean Deletions to recapitulate the motility phenotype •  Do Epistatic Analysis •  Do Bacterial Two Hybrid Assay to show protein-protein interactions •  Evaluate the role of c-di-GMP in the interactions Acknowledgements   1.73   1.6   1.63  1.63   1.43   2.17   2.13   2.3   2.1   1.63   2.25  2.25   2.07   1.68   1.6   1.6   2.35   2.47   2.37   2.16  2.17   2.33   2.53   2.43   1.78   2.23   1.53   2.18   1.6   2.52   2.35   2.63   2.3   1.57   1.759   0   0.5   1   1.5   2   2.5   3   Colony  Measurements  (cm)   Mutant   ΔplzC    Mo6lity  Screen   PlzC   ?   An in-frame deletion of the c-di-GMP receptor plzC causes a decrease in motility of Vibrio cholerae in soft agar plates. This would suggest that PlzC is inhibiting a repressor of motility. Since c-di-GMP has been shown to inhibit motility we speculate that in the presence of this second messenger PlzC wont be able to repress the hypothetical motility repressor. Our primary screen was done in a 96-well format stamping cells grown on selective liquid media over soft agar plates. Examples of a non-selected and selected mutants Controls: ΔplzC SWT We did arbitrary PCR to determine the gene responsible for the suppressor mutation. 1.PraJ,  J.  T.,  R.  Tamayo,  A.  D.  Tischler,  and  A.  Camilli.  "PilZ  Domain   Proteins  Bind  Cyclic  Diguanylate  and  Regulate  Diverse  Processes  in  Vibrio   Cholerae."  Journal  of  Biological  Chemistry  282.17  (2007):  12860-­‐2870.  Print.   2.  Sondermann,  Holger;  Shikuma,  Nicholas  J.;  Yildiz,  Fitnat  H.  ,  “You’ve   come  a  long  way:  c-­‐di-­‐GMP  signaling.”  Current  Opinion  in  Microbiology   (2012):  14-­‐146.     3. Ko,  Junsang,  Kyoung-­‐Seok  Ryu,  Henna  Kim,  Jae-­‐Sun  Shin,  Jie-­‐Oh  Lee,   Chaejoon  Cheong,  and  Byong-­‐Seok  Choi.  "Structure  of  PP4397  Reveals  the   Molecular  Basis  for  Different  C-­‐di-­‐GMP  Binding  Modes  by  Pilz  Domain   Proteins."  Journal  of  Molecular  Biology:  97-­‐110.  Print.     4.  Liu,  X.,  Beyhan,  S.,  Lim,  B.,  Linington,  R.  G.,  &  Yildiz,  F.  H.  (2010).   Iden.fica.on  and  Characteriza.on  of  a  Phosphodiesterase  That  Inversely   Regulates  Mo.lity  and  Biofilm  Forma.on  in  Vibrio  cholerae  .  Journal  of   Bacteriology,  192(18),  4541–4552.  doi:10.1128/JB.00209-­‐10   Wt   ΔplzC   Wt   ΔplzC