The Value of the Scholarly-led, Non-profit Business Model to Achieve Open Acc...REDALYC
The Value of the Scholarly-led, Non-profit Business Model to Achieve Open Access and Scholarly Publishing Beyond APC: the AmeliCA’s Cooperative Approach
The value of the scholarly-led, non-profit business model to achieve Open Acc...REDALYC
The value of the scholarly-led, non-profit business model to achieve Open Access and scholarly publishing beyond APC: the AmeliCA's cooperative approach
EC Open Access Co-ordination workshop - 4th May 2011Jisc
This document discusses open scholarship and the value of open access to scholarly works. It notes that opening up the scholarly record through open access, open bibliography, open citation, and open data can help researchers. It discusses ensuring quality in open scholarship through peer review, citations, and other measures. The document also highlights studies that demonstrate the cost-benefits of open access. Finally, it discusses how open scholarship can help power the knowledge economy and support areas like health care and science policy.
Open access: What's in there for me? And some ideas for advocacy programmesIryna Kuchma
Presentation at the Member Representatives’ Meeting of the European Federation of Psychology Students’ Associations (EFPSA), October 28, 2014,Dobra Voda, Serbia
Introduction to open access and how you can get involvedIryna Kuchma
This document provides an introduction to open access and how individuals can get involved. It discusses how open access provides benefits to researchers, research institutions, and publishers. It provides practical guidance on copyright and submitting articles to journals. It addresses concerns about plagiarism and open access. Finally, it discusses examples of open access activities in different countries and calls for collaboration to promote open access.
The Value of the Scholarly-led, Non-profit Business Model to Achieve Open Acc...REDALYC
The Value of the Scholarly-led, Non-profit Business Model to Achieve Open Access and Scholarly Publishing Beyond APC: the AmeliCA’s Cooperative Approach
The value of the scholarly-led, non-profit business model to achieve Open Acc...REDALYC
The value of the scholarly-led, non-profit business model to achieve Open Access and scholarly publishing beyond APC: the AmeliCA's cooperative approach
EC Open Access Co-ordination workshop - 4th May 2011Jisc
This document discusses open scholarship and the value of open access to scholarly works. It notes that opening up the scholarly record through open access, open bibliography, open citation, and open data can help researchers. It discusses ensuring quality in open scholarship through peer review, citations, and other measures. The document also highlights studies that demonstrate the cost-benefits of open access. Finally, it discusses how open scholarship can help power the knowledge economy and support areas like health care and science policy.
Open access: What's in there for me? And some ideas for advocacy programmesIryna Kuchma
Presentation at the Member Representatives’ Meeting of the European Federation of Psychology Students’ Associations (EFPSA), October 28, 2014,Dobra Voda, Serbia
Introduction to open access and how you can get involvedIryna Kuchma
This document provides an introduction to open access and how individuals can get involved. It discusses how open access provides benefits to researchers, research institutions, and publishers. It provides practical guidance on copyright and submitting articles to journals. It addresses concerns about plagiarism and open access. Finally, it discusses examples of open access activities in different countries and calls for collaboration to promote open access.
Using Healthcare Data for Research @ The Hyve - Campus Party 2016Kees van Bochove
In this presentation, Kees van Bochove, founder & CEO of The Hyve, a services company in biomedical open source software, presents a number of different types of healthcare data. As an example, he also provides details of a project in which The Hyve participates and which uses that kind of data. Covered are: translational medicine data using tranSMART and cBioPortal, population health data using OMOP and OHDSI, and personal health data processing using open mHealth Shimmer and Apache Kafka.
OpenAIRE factsheet: Open Access in Horizon 2020 (for Research Administrators)OpenAIRE
The document provides guidance for research administrators on including references to open access and open science in Horizon 2020 grant applications. It highlights the requirements to provide open access to publications and research data, and recommends depositing publications and data in repositories. The document gives an example text for the impact section that describes plans to make research outputs openly available and adopt open science principles.
Data-driven models for efficient diagnosis and disease management. From Academia to Startups.
Talk given at Crabb Lab Meeting, City University, London UK – Wed 23 August 2017
Open Science, Why not?
Presented at the Agreenskills meeting
Paris, 15 February 2017
Abstract: Imagine YOUR research some time in the future! Abandon all preconceptions, and imagine an idealised way of how research might be done in the future. What does it look like? Is the knowledge you’ll create in the future constrained to your pencil scribbled notebook, to your lab, and to the pages of an elite journal? Or does it flow seamlessly across disciplines and collaborative teams. Is the knowledge you generate in the future categorised, labelled and published according to rigid disciplinary taxonomy, or is it being applied by people you never met and may never meet. Is the fruit of your labour so discoverable, accessible and re-usable that it advances knowledge, fixes real world problems in research directions that you never thought of possible anticipated? And imagine all that happens even while you are sleeping, but attributing full credit to you? That future may become the default setting sooner than you might guess.
The presentation will briefly introduce Open Science in the context of an open, transparent, re-usable and reproducible research lifecycle, and present strategic and career arguments, such as why research of relevance to societal challenges can not afford not to adopt Open Science as the default setting.
Presentation given to the first conference Pubmet, Zadar, Croatia, 2014
For the live presentation having all the rich media, please access: http://kosson.ro/webpedia/presentationsnicolaiec/Croatia2014/#/
The document describes the development of the Open Drug Discovery Teams (ODDT) mobile app, which aims to facilitate collaboration in drug discovery. The app aggregates open science data from sources like Twitter on topics related to rare and neglected diseases. It provides a magazine-style interface for browsing recent posts. The app and its backend were developed iteratively, with input from researchers during testing. The app harvests tweets with specific hashtags and allows users to endorse or reject posts. It can visualize chemical structures and tables linked from tweets. The goal is to connect researchers and data to help accelerate open drug discovery.
An open science introduction. Olinfer 18, La havana, Cuba 12-14 nov 2018pascal aventurier
Open Science is the practice of conducting science openly, where research data, lab notes and processes are freely available under terms of reuse. It promotes collaboration and contributions from others. The document discusses benefits like increased verification, reduced duplication and innovation. It also covers topics like open access, research data management, data repositories, and the FAIR principles. The goal of Open Science is greater efficiency, transparency and interdisciplinary work.
webinar: Equity and inclusion: community-owned infrastructures for open science. Organizaron: Confederation of Open Access Repositories (COAR), European Open Access Infrastructure (OpenAIRE) y Electronic Information for Libraries (EIFL). 21 de octubre 2020. Video del webinar: https://www.youtube.com/watch?v=OJifBtuBlRM&feature=emb_imp_woyt&ab_channel=OpenAIRE_eu
Program: https://www.openaire.eu/item/equity-and-inclusion-community-owned-infrastructures-for-open-science
Presentation at webinar: Equity and inclusion: community-owned infrastructures for open science. Organized by: Confederation of Open Access Repositories (COAR), European Open Access Infrastructure (OpenAIRE) y Electronic Information for Libraries (EIFL). 21 October 2020.
Video of webinar: https://www.youtube.com/watch?v=OJifBtuBlRM&feature=emb_imp_woyt&ab_channel=OpenAIRE_eu
Program: https://www.openaire.eu/item/equity-and-inclusion-community-owned-infrastructures-for-open-science
Genesis of Altmetrics or Article-level Metrics for Measuring Efficacy of Scho...Anup Kumar Das
Pre-Print Version of a research paper submitted to Journal of Scientometric Research, 2014.
Abstract: The Article-level metrics or altmetrics becomes a new trendsetter in recent times for measuring impact of scientific publications and their social outreach to intended audiences. The popular social networks such as Facebook, Twitter and Linkedin and social bookmarks such as Mendeley and CiteULike are nowadays widely used for communicating research to larger transnational audiences. In 2012, the San Francisco Declaration on Research Assessment (DORA) got signed by the scientific and researchers communities across the world. This Declaration has given preference to the article-level metrics (ALM) or altmetrics over traditional but faulty journal impact factor (JIF)-based assessment of career scientists. JIF does not consider impact or influence beyond citations count, as this count reflected only through Thomson Reuters Web of Science database. Also JIF provides indicator related to a journal, but not related to a published paper. Thus, altmetrics now becomes an alternative metrics for performance assessment of individual scientists and their contributed scholarly publications. This paper provides a glimpse of genesis of altmetrics in measuring efficacy of scholarly communications. This paper also highlights available altmetric tools and social platforms linking altmetric tools, which are widely used in deriving altmetric scores of scholarly publications.
Research Data Management: a gentle introduction for admin staffMartin Donnelly
The document provides an overview of research data management (RDM) for administrative staff. It defines RDM as the active management of data over its lifecycle, and discusses why RDM is important due to funder requirements, risk management, and transparency. It outlines key roles and responsibilities for researchers and support staff, noting support staff should understand funder policies, provide guidance to researchers, and expect questions about RDM processes.
Stepping out of the echo chamber - Alternative indicators of scholarly commun...Andy Tattersall
This set of slides which was presented at Sheffield Hallam University and The London School of Hygene and Tropical Medicine. They showcase the many ways academics can leverage digital scholary communication tools to discover what is being said about their research and how best to respond to that conversation.
200-ORCID Understanding Innovation better through an identifier infrastructureinnovationoecd
This document discusses how persistent identifiers like ORCID can uniquely identify contributors and enable new forms of understanding research processes. It describes a project in Italy that integrated ORCID iDs into their national research evaluation process, involving over 70,000 contributors. This large-scale project demonstrated how identifiers can improve data quality and efficiency. The document also explains how identifiers can connect people, organizations, and activities to provide a foundation for analyzing the networks that drive innovation.
Science, Technology and Innovation Outlook 2016 - EC/OECD Launch eventinnovationoecd
The document summarizes key points from the OECD Science, Technology and Innovation Outlook 2016. It discusses 8 megatrends that will impact science and innovation like aging societies and resource constraints. It also profiles 10 emerging technologies like artificial intelligence, biotechnologies, and the internet of things that will be important. The outlook notes challenges for governments in funding research due to competing priorities and calls for building international cooperation and more responsible innovation policies.
Winning ITNs with RRI - Relevant sources and further readingJobenco
Here is some more background on the notion of Responsible Research and Innovation (RRI), how it has been operationalised in Horizon 2020 and how it can be relevant for writing MSCA ITN proposals. We have included the academic and policy background and concrete sources/best practices to inspire others to take it up in their proposal.
1) The document discusses how academic publishing is evolving towards open access publishing, with mandates from funders and governments driving more content open access.
2) It introduces PeerJ, an open access journal and preprint server that provides publication and peer review services with a focus on usability, metrics, and value for researchers.
3) While traditional attitudes towards prestige still hold back open access to some degree, the document predicts that open access will overtake the subscription model by 2017 as innovations in open access change the industry.
Sains Terbuka: From Psychology with Love in ScienceJuneman Abraham
Materi paparan #SainsTerbuka di Program Studi Psikologi, FISIP, Universitas Brawijaya, 2019. Beberapa pemantik ke depan:
1. Open Science (atau: Science): membiarkan semua pihak mengetahui dan terlibat dalam proses sains manapun, termasuk tinjauan sejawat pada saat menulis proposal riset. Aneh jika kita tidak tahu tetangga kita mengerjakan riset apa, dan ternyata satu topik dengan kita.
2. Beberapa insentif tingkat institusional: memberikan sabuk untuk jurnal yang menerapkan preregistrasi, atau perguruan tinggi memberikan kriteria angka kredit bagi kenaikan jabatan akademik/jabatan fungsional bagi dosen/peneliti yang melakukan praktik open science.
3. Akses terbuka memungkinkan dilakukannya penggunaan kembali (lihat lisensinya) bahkan meta-analisis, bukan hanya bebas membaca. Stigma terhadap kualitas jurnal dengan akses terbuka, disebabkan karena ulah sejumlah penerbit predator yang juga menampilkan tampang akses terbuka.
4. Open peer review bukan hanya soal 'open'-nya, tetapi juga soal menyeimbangkan sentimen reviewer tertentu. Semua hasil review tidak bisa tidak mesti dipertanggungjawabkan kepada publik, bukan hanya kepada editor jurnal secara single-blind atau double-blind. Manajemen impresi reviewer dapat mendorong review yang lebih konstruktif. Di samping itu, manajemen pengetahuan hasil-hasil open review merupakan 'modal sosial', di samping 'kapital pengetahuan', yang luar biasa. Kualitas open peer review memiliki variasi tingkatan; ScienceOpen menerapkan moderasi dan filter kualifikasi reviewer, misalnya. Lokus open peer review bisa di dalam atau di luar artikel itu sendiri.
5. Falsifikasi tabel atau gambar dapat diperkecil dengan open data.
6. Sudah saatnya bukan hanya publikasi yang dapat dianggap memberikan kontribusi kepada sains, tetapi juga deposisi data dalam depositori dan juga open data serta penerbitan data (lihat juga: data in brief).
7. Gerakan yang lebih 'radikal' adalah open notebook yang berlangsung secara 'real time' juntuk setiap fase dan faset kegiatan penelitian.
Public engagement while you sleep? How altmetrics can help researchers broade...UoLResearchSupport
Slides from a seminar delivered for pepnet at the University of Leeds 28 Nov 2018. Thanks to Charlotte Perry-Houts for extra content:
From peer reviewed journal articles, to assorted reports and grey literature, to datasets comprising numerical, textual or multimedia files; we generate thousands of research outputs.
In this session, Kirsten Thompson (OD&PL) and Nick Sheppard (Library) will discuss strategies for increasing quality online engagement with that research. We will explore how you can use ‘alternative metrics’, more commonly known as ‘altmetrics’, to monitor such engagement. Altmetrics can help to showcase the reach of your work, supplement grant and tenure applications, identify new audiences, and connect with other researchers in your discipline.
In the age of “fake news”, academics have a responsibility to share their expertise beyond the Ivory Tower. We’ll show you how to ensure all these disparate outputs are properly curated in university repositories with a Digital Object Identifier (DOI). There will also be an opportunity to learn about and contribute to the Library led Data Management Engagement Award, a first-ever competition launched to elicit new and imaginative ideas for engaging researchers in the practices of good Research Data Management (RDM).
How altmetrics can help researchers broaden the reach of their work. Workshop facilitated by Kirsten Thompson and Nick Sheppard at the University of Leeds for the #PepnetLeeds network November 28th 2018.
The document is a letter from Pandelis Perakakis declining to publish a manuscript with a journal after the journal shared the manuscript with an anonymous expert without authorization. Perakakis had submitted the manuscript along with Mr. Rosen, who has since left for the Soviet Union. Perakakis states he sees no reason to address the erroneous comments from the anonymous expert and will instead publish the paper elsewhere due to this incident.
Dr. Pandelis Perakakis argues that true science must be open science. He outlines three key points of open science: having an open mind and being skeptical, considering all data, and having no investment in experimental outcomes. However, the current academic system rewards competition over collaboration and closed access over openness. The two main open access strategies are gold, which funds open access publication fees, and green, which archives articles in institutional repositories. While green access does not generate revenue, gold represents a new business opportunity for publishers by opening authors as potential new customers.
Using Healthcare Data for Research @ The Hyve - Campus Party 2016Kees van Bochove
In this presentation, Kees van Bochove, founder & CEO of The Hyve, a services company in biomedical open source software, presents a number of different types of healthcare data. As an example, he also provides details of a project in which The Hyve participates and which uses that kind of data. Covered are: translational medicine data using tranSMART and cBioPortal, population health data using OMOP and OHDSI, and personal health data processing using open mHealth Shimmer and Apache Kafka.
OpenAIRE factsheet: Open Access in Horizon 2020 (for Research Administrators)OpenAIRE
The document provides guidance for research administrators on including references to open access and open science in Horizon 2020 grant applications. It highlights the requirements to provide open access to publications and research data, and recommends depositing publications and data in repositories. The document gives an example text for the impact section that describes plans to make research outputs openly available and adopt open science principles.
Data-driven models for efficient diagnosis and disease management. From Academia to Startups.
Talk given at Crabb Lab Meeting, City University, London UK – Wed 23 August 2017
Open Science, Why not?
Presented at the Agreenskills meeting
Paris, 15 February 2017
Abstract: Imagine YOUR research some time in the future! Abandon all preconceptions, and imagine an idealised way of how research might be done in the future. What does it look like? Is the knowledge you’ll create in the future constrained to your pencil scribbled notebook, to your lab, and to the pages of an elite journal? Or does it flow seamlessly across disciplines and collaborative teams. Is the knowledge you generate in the future categorised, labelled and published according to rigid disciplinary taxonomy, or is it being applied by people you never met and may never meet. Is the fruit of your labour so discoverable, accessible and re-usable that it advances knowledge, fixes real world problems in research directions that you never thought of possible anticipated? And imagine all that happens even while you are sleeping, but attributing full credit to you? That future may become the default setting sooner than you might guess.
The presentation will briefly introduce Open Science in the context of an open, transparent, re-usable and reproducible research lifecycle, and present strategic and career arguments, such as why research of relevance to societal challenges can not afford not to adopt Open Science as the default setting.
Presentation given to the first conference Pubmet, Zadar, Croatia, 2014
For the live presentation having all the rich media, please access: http://kosson.ro/webpedia/presentationsnicolaiec/Croatia2014/#/
The document describes the development of the Open Drug Discovery Teams (ODDT) mobile app, which aims to facilitate collaboration in drug discovery. The app aggregates open science data from sources like Twitter on topics related to rare and neglected diseases. It provides a magazine-style interface for browsing recent posts. The app and its backend were developed iteratively, with input from researchers during testing. The app harvests tweets with specific hashtags and allows users to endorse or reject posts. It can visualize chemical structures and tables linked from tweets. The goal is to connect researchers and data to help accelerate open drug discovery.
An open science introduction. Olinfer 18, La havana, Cuba 12-14 nov 2018pascal aventurier
Open Science is the practice of conducting science openly, where research data, lab notes and processes are freely available under terms of reuse. It promotes collaboration and contributions from others. The document discusses benefits like increased verification, reduced duplication and innovation. It also covers topics like open access, research data management, data repositories, and the FAIR principles. The goal of Open Science is greater efficiency, transparency and interdisciplinary work.
webinar: Equity and inclusion: community-owned infrastructures for open science. Organizaron: Confederation of Open Access Repositories (COAR), European Open Access Infrastructure (OpenAIRE) y Electronic Information for Libraries (EIFL). 21 de octubre 2020. Video del webinar: https://www.youtube.com/watch?v=OJifBtuBlRM&feature=emb_imp_woyt&ab_channel=OpenAIRE_eu
Program: https://www.openaire.eu/item/equity-and-inclusion-community-owned-infrastructures-for-open-science
Presentation at webinar: Equity and inclusion: community-owned infrastructures for open science. Organized by: Confederation of Open Access Repositories (COAR), European Open Access Infrastructure (OpenAIRE) y Electronic Information for Libraries (EIFL). 21 October 2020.
Video of webinar: https://www.youtube.com/watch?v=OJifBtuBlRM&feature=emb_imp_woyt&ab_channel=OpenAIRE_eu
Program: https://www.openaire.eu/item/equity-and-inclusion-community-owned-infrastructures-for-open-science
Genesis of Altmetrics or Article-level Metrics for Measuring Efficacy of Scho...Anup Kumar Das
Pre-Print Version of a research paper submitted to Journal of Scientometric Research, 2014.
Abstract: The Article-level metrics or altmetrics becomes a new trendsetter in recent times for measuring impact of scientific publications and their social outreach to intended audiences. The popular social networks such as Facebook, Twitter and Linkedin and social bookmarks such as Mendeley and CiteULike are nowadays widely used for communicating research to larger transnational audiences. In 2012, the San Francisco Declaration on Research Assessment (DORA) got signed by the scientific and researchers communities across the world. This Declaration has given preference to the article-level metrics (ALM) or altmetrics over traditional but faulty journal impact factor (JIF)-based assessment of career scientists. JIF does not consider impact or influence beyond citations count, as this count reflected only through Thomson Reuters Web of Science database. Also JIF provides indicator related to a journal, but not related to a published paper. Thus, altmetrics now becomes an alternative metrics for performance assessment of individual scientists and their contributed scholarly publications. This paper provides a glimpse of genesis of altmetrics in measuring efficacy of scholarly communications. This paper also highlights available altmetric tools and social platforms linking altmetric tools, which are widely used in deriving altmetric scores of scholarly publications.
Research Data Management: a gentle introduction for admin staffMartin Donnelly
The document provides an overview of research data management (RDM) for administrative staff. It defines RDM as the active management of data over its lifecycle, and discusses why RDM is important due to funder requirements, risk management, and transparency. It outlines key roles and responsibilities for researchers and support staff, noting support staff should understand funder policies, provide guidance to researchers, and expect questions about RDM processes.
Stepping out of the echo chamber - Alternative indicators of scholarly commun...Andy Tattersall
This set of slides which was presented at Sheffield Hallam University and The London School of Hygene and Tropical Medicine. They showcase the many ways academics can leverage digital scholary communication tools to discover what is being said about their research and how best to respond to that conversation.
200-ORCID Understanding Innovation better through an identifier infrastructureinnovationoecd
This document discusses how persistent identifiers like ORCID can uniquely identify contributors and enable new forms of understanding research processes. It describes a project in Italy that integrated ORCID iDs into their national research evaluation process, involving over 70,000 contributors. This large-scale project demonstrated how identifiers can improve data quality and efficiency. The document also explains how identifiers can connect people, organizations, and activities to provide a foundation for analyzing the networks that drive innovation.
Science, Technology and Innovation Outlook 2016 - EC/OECD Launch eventinnovationoecd
The document summarizes key points from the OECD Science, Technology and Innovation Outlook 2016. It discusses 8 megatrends that will impact science and innovation like aging societies and resource constraints. It also profiles 10 emerging technologies like artificial intelligence, biotechnologies, and the internet of things that will be important. The outlook notes challenges for governments in funding research due to competing priorities and calls for building international cooperation and more responsible innovation policies.
Winning ITNs with RRI - Relevant sources and further readingJobenco
Here is some more background on the notion of Responsible Research and Innovation (RRI), how it has been operationalised in Horizon 2020 and how it can be relevant for writing MSCA ITN proposals. We have included the academic and policy background and concrete sources/best practices to inspire others to take it up in their proposal.
1) The document discusses how academic publishing is evolving towards open access publishing, with mandates from funders and governments driving more content open access.
2) It introduces PeerJ, an open access journal and preprint server that provides publication and peer review services with a focus on usability, metrics, and value for researchers.
3) While traditional attitudes towards prestige still hold back open access to some degree, the document predicts that open access will overtake the subscription model by 2017 as innovations in open access change the industry.
Sains Terbuka: From Psychology with Love in ScienceJuneman Abraham
Materi paparan #SainsTerbuka di Program Studi Psikologi, FISIP, Universitas Brawijaya, 2019. Beberapa pemantik ke depan:
1. Open Science (atau: Science): membiarkan semua pihak mengetahui dan terlibat dalam proses sains manapun, termasuk tinjauan sejawat pada saat menulis proposal riset. Aneh jika kita tidak tahu tetangga kita mengerjakan riset apa, dan ternyata satu topik dengan kita.
2. Beberapa insentif tingkat institusional: memberikan sabuk untuk jurnal yang menerapkan preregistrasi, atau perguruan tinggi memberikan kriteria angka kredit bagi kenaikan jabatan akademik/jabatan fungsional bagi dosen/peneliti yang melakukan praktik open science.
3. Akses terbuka memungkinkan dilakukannya penggunaan kembali (lihat lisensinya) bahkan meta-analisis, bukan hanya bebas membaca. Stigma terhadap kualitas jurnal dengan akses terbuka, disebabkan karena ulah sejumlah penerbit predator yang juga menampilkan tampang akses terbuka.
4. Open peer review bukan hanya soal 'open'-nya, tetapi juga soal menyeimbangkan sentimen reviewer tertentu. Semua hasil review tidak bisa tidak mesti dipertanggungjawabkan kepada publik, bukan hanya kepada editor jurnal secara single-blind atau double-blind. Manajemen impresi reviewer dapat mendorong review yang lebih konstruktif. Di samping itu, manajemen pengetahuan hasil-hasil open review merupakan 'modal sosial', di samping 'kapital pengetahuan', yang luar biasa. Kualitas open peer review memiliki variasi tingkatan; ScienceOpen menerapkan moderasi dan filter kualifikasi reviewer, misalnya. Lokus open peer review bisa di dalam atau di luar artikel itu sendiri.
5. Falsifikasi tabel atau gambar dapat diperkecil dengan open data.
6. Sudah saatnya bukan hanya publikasi yang dapat dianggap memberikan kontribusi kepada sains, tetapi juga deposisi data dalam depositori dan juga open data serta penerbitan data (lihat juga: data in brief).
7. Gerakan yang lebih 'radikal' adalah open notebook yang berlangsung secara 'real time' juntuk setiap fase dan faset kegiatan penelitian.
Public engagement while you sleep? How altmetrics can help researchers broade...UoLResearchSupport
Slides from a seminar delivered for pepnet at the University of Leeds 28 Nov 2018. Thanks to Charlotte Perry-Houts for extra content:
From peer reviewed journal articles, to assorted reports and grey literature, to datasets comprising numerical, textual or multimedia files; we generate thousands of research outputs.
In this session, Kirsten Thompson (OD&PL) and Nick Sheppard (Library) will discuss strategies for increasing quality online engagement with that research. We will explore how you can use ‘alternative metrics’, more commonly known as ‘altmetrics’, to monitor such engagement. Altmetrics can help to showcase the reach of your work, supplement grant and tenure applications, identify new audiences, and connect with other researchers in your discipline.
In the age of “fake news”, academics have a responsibility to share their expertise beyond the Ivory Tower. We’ll show you how to ensure all these disparate outputs are properly curated in university repositories with a Digital Object Identifier (DOI). There will also be an opportunity to learn about and contribute to the Library led Data Management Engagement Award, a first-ever competition launched to elicit new and imaginative ideas for engaging researchers in the practices of good Research Data Management (RDM).
How altmetrics can help researchers broaden the reach of their work. Workshop facilitated by Kirsten Thompson and Nick Sheppard at the University of Leeds for the #PepnetLeeds network November 28th 2018.
The document is a letter from Pandelis Perakakis declining to publish a manuscript with a journal after the journal shared the manuscript with an anonymous expert without authorization. Perakakis had submitted the manuscript along with Mr. Rosen, who has since left for the Soviet Union. Perakakis states he sees no reason to address the erroneous comments from the anonymous expert and will instead publish the paper elsewhere due to this incident.
Dr. Pandelis Perakakis argues that true science must be open science. He outlines three key points of open science: having an open mind and being skeptical, considering all data, and having no investment in experimental outcomes. However, the current academic system rewards competition over collaboration and closed access over openness. The two main open access strategies are gold, which funds open access publication fees, and green, which archives articles in institutional repositories. While green access does not generate revenue, gold represents a new business opportunity for publishers by opening authors as potential new customers.
"One damned thing after another”: The journal monopoly, how it came to be, wh...Pandelis Perakakis
This document summarizes the issues around journal monopolies and open access publishing. It discusses how journal publishing became concentrated in the hands of a few large commercial publishers, and how this impacts scientific communication. It also outlines some potential solutions to increase open access, such as self-archiving papers in open repositories and publishing in open access journals. The key issues are the lack of competition in scientific publishing and the need for more affordable and open dissemination of research.
Validation, Evaluation, Dissemination: Academia’s gravest problems show the w...Pandelis Perakakis
The document discusses issues with the current systems of validation, evaluation, and dissemination of scholarly research that are controlled by journals. It argues that journal peer review does not always ensure quality, reproducibility, or reliability of research. It also asserts that the current systems focus more on where research is published rather than its actual contents, and that alternative models based on open peer review in repositories could help address these problems by providing more transparency, expert review, and dynamic assessment. The document presents examples of repositories and modules that aim to pilot such alternative systems.
A 2-day lecture on breathing training focused on emotional disorders, such as generalised anxiety and panic. Includes slides on respiratory physiology, hyperventilation syndrome, respiratory muscles and breathing modification.
The problem of accessibility to scientific research is already solved through Green Open Access. More serious and important problems are those of validation and evaluation that still depend exclusively on academic journals. I propose to dissociate these processes from academic journals and show an easy way to do exactly that taking advantage mostly of existing infrastructure.
Este documento trata sobre el asma. Define el asma como un trastorno inflamatorio crónico de las vías respiratorias asociado con obstrucción reversible y mayor sensibilidad a estímulos. Explica que la inflamación juega un papel clave pero no se evalúa directamente, y que la educación respiratoria puede reemplazar el uso de broncodilatadores. También discute conceptos erróneos sobre la respiración y cómo normalizarla a través de la postura, relajación muscular y ejercicios de hipoventilación
Presentation on Independent Open Peer Review by Michael Taylor at the OpenAIRE-COAR Conference: "Open Access Movement to Reality: Putting the Pieces Together" held in Athens.
Brief presentation of Open Scholar and the LIBRE project at the Information Days on Horizon 2020 Research Infrastructures Work Programme 2014-2015 with focus on e-Infrastructures
On Thursday 5th of December, Open Scholar co-founder Pandelis Perakakis gave a talk on how to move beyond open access and face academia’s real problems, at the Ludwig Maximilian University in Munich. The talk focused on how the journal monopoly over three of the most basic processes in scholarly communication —validation, evaluation and dissemination— is creating problems even more important than the lack of accessibility to research output. The LIBRE platform was presented as an alternative, free, journal-independent, community-based model of research validation and evaluation where the author is at the center of an open and transparent peer review process.
The cost of acquiring information by natural selectionCarl Bergstrom
This is a short talk that I gave at the Banff International Research Station workshop on Modeling and Theory in Population Biology. The idea is to try to understand how the burden of natural selection relates to the amount of information that selection puts into the genome.
It's based on the first part of this research paper:
The cost of information acquisition by natural selection
Ryan Seamus McGee, Olivia Kosterlitz, Artem Kaznatcheev, Benjamin Kerr, Carl T. Bergstrom
bioRxiv 2022.07.02.498577; doi: https://doi.org/10.1101/2022.07.02.498577
Current Ms word generated power point presentation covers major details about the micronuclei test. It's significance and assays to conduct it. It is used to detect the micronuclei formation inside the cells of nearly every multicellular organism. It's formation takes place during chromosomal sepration at metaphase.
Authoring a personal GPT for your research and practice: How we created the Q...Leonel Morgado
Thematic analysis in qualitative research is a time-consuming and systematic task, typically done using teams. Team members must ground their activities on common understandings of the major concepts underlying the thematic analysis, and define criteria for its development. However, conceptual misunderstandings, equivocations, and lack of adherence to criteria are challenges to the quality and speed of this process. Given the distributed and uncertain nature of this process, we wondered if the tasks in thematic analysis could be supported by readily available artificial intelligence chatbots. Our early efforts point to potential benefits: not just saving time in the coding process but better adherence to criteria and grounding, by increasing triangulation between humans and artificial intelligence. This tutorial will provide a description and demonstration of the process we followed, as two academic researchers, to develop a custom ChatGPT to assist with qualitative coding in the thematic data analysis process of immersive learning accounts in a survey of the academic literature: QUAL-E Immersive Learning Thematic Analysis Helper. In the hands-on time, participants will try out QUAL-E and develop their ideas for their own qualitative coding ChatGPT. Participants that have the paid ChatGPT Plus subscription can create a draft of their assistants. The organizers will provide course materials and slide deck that participants will be able to utilize to continue development of their custom GPT. The paid subscription to ChatGPT Plus is not required to participate in this workshop, just for trying out personal GPTs during it.
Travis Hills of MN is Making Clean Water Accessible to All Through High Flux ...Travis Hills MN
By harnessing the power of High Flux Vacuum Membrane Distillation, Travis Hills from MN envisions a future where clean and safe drinking water is accessible to all, regardless of geographical location or economic status.
The technology uses reclaimed CO₂ as the dyeing medium in a closed loop process. When pressurized, CO₂ becomes supercritical (SC-CO₂). In this state CO₂ has a very high solvent power, allowing the dye to dissolve easily.
The binding of cosmological structures by massless topological defectsSérgio Sacani
Assuming spherical symmetry and weak field, it is shown that if one solves the Poisson equation or the Einstein field
equations sourced by a topological defect, i.e. a singularity of a very specific form, the result is a localized gravitational
field capable of driving flat rotation (i.e. Keplerian circular orbits at a constant speed for all radii) of test masses on a thin
spherical shell without any underlying mass. Moreover, a large-scale structure which exploits this solution by assembling
concentrically a number of such topological defects can establish a flat stellar or galactic rotation curve, and can also deflect
light in the same manner as an equipotential (isothermal) sphere. Thus, the need for dark matter or modified gravity theory is
mitigated, at least in part.
Mending Clothing to Support Sustainable Fashion_CIMaR 2024.pdfSelcen Ozturkcan
Ozturkcan, S., Berndt, A., & Angelakis, A. (2024). Mending clothing to support sustainable fashion. Presented at the 31st Annual Conference by the Consortium for International Marketing Research (CIMaR), 10-13 Jun 2024, University of Gävle, Sweden.
The debris of the ‘last major merger’ is dynamically youngSérgio Sacani
The Milky Way’s (MW) inner stellar halo contains an [Fe/H]-rich component with highly eccentric orbits, often referred to as the
‘last major merger.’ Hypotheses for the origin of this component include Gaia-Sausage/Enceladus (GSE), where the progenitor
collided with the MW proto-disc 8–11 Gyr ago, and the Virgo Radial Merger (VRM), where the progenitor collided with the
MW disc within the last 3 Gyr. These two scenarios make different predictions about observable structure in local phase space,
because the morphology of debris depends on how long it has had to phase mix. The recently identified phase-space folds in Gaia
DR3 have positive caustic velocities, making them fundamentally different than the phase-mixed chevrons found in simulations
at late times. Roughly 20 per cent of the stars in the prograde local stellar halo are associated with the observed caustics. Based
on a simple phase-mixing model, the observed number of caustics are consistent with a merger that occurred 1–2 Gyr ago.
We also compare the observed phase-space distribution to FIRE-2 Latte simulations of GSE-like mergers, using a quantitative
measurement of phase mixing (2D causticality). The observed local phase-space distribution best matches the simulated data
1–2 Gyr after collision, and certainly not later than 3 Gyr. This is further evidence that the progenitor of the ‘last major merger’
did not collide with the MW proto-disc at early times, as is thought for the GSE, but instead collided with the MW disc within
the last few Gyr, consistent with the body of work surrounding the VRM.
Describing and Interpreting an Immersive Learning Case with the Immersion Cub...Leonel Morgado
Current descriptions of immersive learning cases are often difficult or impossible to compare. This is due to a myriad of different options on what details to include, which aspects are relevant, and on the descriptive approaches employed. Also, these aspects often combine very specific details with more general guidelines or indicate intents and rationales without clarifying their implementation. In this paper we provide a method to describe immersive learning cases that is structured to enable comparisons, yet flexible enough to allow researchers and practitioners to decide which aspects to include. This method leverages a taxonomy that classifies educational aspects at three levels (uses, practices, and strategies) and then utilizes two frameworks, the Immersive Learning Brain and the Immersion Cube, to enable a structured description and interpretation of immersive learning cases. The method is then demonstrated on a published immersive learning case on training for wind turbine maintenance using virtual reality. Applying the method results in a structured artifact, the Immersive Learning Case Sheet, that tags the case with its proximal uses, practices, and strategies, and refines the free text case description to ensure that matching details are included. This contribution is thus a case description method in support of future comparative research of immersive learning cases. We then discuss how the resulting description and interpretation can be leveraged to change immersion learning cases, by enriching them (considering low-effort changes or additions) or innovating (exploring more challenging avenues of transformation). The method holds significant promise to support better-grounded research in immersive learning.
6. 1958: Fundación del ISI (Institute for Scientific Information)
1961: Publicación del SCI (Science Citation Index)
1992: ISI comprado por ThomsonTM por $210 million
“Journal impact factors are used only - and cautiously - for measuring and
comparing the influence of entire journals, but not for the assessment of
single papers, and certainly not for the assessment of researchers or
research programs either directly or as a surrogate.”
European Association of Science Editors (EASE)*
Garfield E (2006). The history and meaning of the journal impact factor, The Journal
of the American Medical Association, 295: 90-93.
*EASE statement on inappropriate use of impact factors
7. Taylor M., Perakakis P., Trachana V. (2008). The Siege of Science. Ethics in Science
and Environmental Politics. 8(1), pp. 17–40.
8.
9. “Today’s academic publishing model treats knowledge as a material good.
Instead of collaborating... scholars are forced to compete for a limited
number of prestigious publication slots... this whole enterprise is based on
the economics of scarcity where value is accrued from exclusivity.”
Perakakis, P. (2013). New forms of open peer review will allow academics to
separate scholarly evaluation from academic journals. London School of Economics.
Impact of Social Sciences Blog.
10. Taylor M., Perakakis P., Trachana V. (2008). The Siege of Science. Ethics in Science
and Environmental Politics. 8(1), pp. 17–40.
11. Presupuesto 2020
• Universidad Complutense de Madrid 2.846.040,62 €1
• Universidad de Granada 1.045.250,00 €2
1https://www.ucm.es/portaldetransparencia/informacionpresupuestaria
2https://gerencia.ugr.es/pages/vger_eco/presupuestos/presupuesto2020ugr
12. Grossmann, A. and Brembs, B. Current market rates for scholarly publishing
services. F1000Research 2021, 10–20.
13. Declaraciones financieras de Elsevier en 2018
• Net profit: 1,107,876,427.69 €
• Operating profit margin: 37,1%
• “In 2018 we made three small acquisitions in support of our
organic growth strategy, Via Oncology, Aries Systems and
Science-Metrix, and disposed of a minor pharma business in
Japan.”
• “Our customer environment remains largely unchanged, and we
expect another year of modest underlying revenue growth.”
https://www.relx.com/∼/media/Files/R/RELX-Group/documents/press-
releases/2019/relx-results-2018-pressrelease.pdf
14.
15.
16. citation metrics (IF)
journal prestige
altmetrics
2-3 anonymous reviewers
disclosed reviews
Dissemination
Evaluation
Validation
scholarly communication
processes
many expert reviewers
no conflicts of interest
argumentation
preservation
licencing
visibility
ideal
many expert reviewers
no conflicts of interest
argumentation
Journal
dependent
private servers
restrictive licenses
APCs or subscriptions
17. Perakakis, P. (2017). Open scientists in the shoes of frustrated academics.
Euroscientist
18. “La mayoría de los jóvenes
investigadores entran en la
escena con el deseo de ser
científicos, pero rápidamente se
ven obligados a convertirse en
académicos.”
Perakakis, P. (2017). Open scientists in the shoes of frustrated academics.
Euroscientist
35. By “open access” to this literature, we mean its free availability on
the public internet, permitting any users to read, download, copy,
distribute, print, search, or link to the full texts of these articles,
crawl them for indexing, pass them as data to software, or use them
for any other lawful purpose, without financial, legal, or technical
barriers.
https://www.budapestopenaccessinitiative.org/read
36. By “open access” to this literature, we mean its free availability on
the public internet, permitting any users to read, download, copy,
distribute, print, search, or link to the full texts of these articles,
crawl them for indexing, pass them as data to software, or use them
for any other lawful purpose, without financial, legal, or technical
barriers.
To achieve open access to scholarly journal literature, we
recommend two complementary strategies.
1. Self-Archiving
2. Open-access journals
https://www.budapestopenaccessinitiative.org/read
37.
38. “Green OA has no promise of delivering
augmented revenues to the publisher, but Gold
OA opens up a new customer, the author him or
herself, who in many instances pays for the
article to be OA. Gold OA, in other words,
represents a business opportunity, whereas
Green OA represents a business problem.”
Joseph Esposito, Publishing consultant
https://scholarlykitchen.sspnet.org/2013/12/03/how-plos-one-can-have-it-all/
39. 2012: The Finch report
Recommendations:
1. a clear policy direction should be set towards support for
publication in open access or hybrid journals, funded by APCs,
as the main vehicle for the publication of research, especially
when it is publicly funded.
Key actions:
1. Make a clear commitment to support the costs of an innovative
and sustainable research communications system, with a clear
preference for publication in open access or hybrid journals.
40. 2018: Plan S
cOAlition S endorses several strategies to encourage subscription
publishers to transition to full and immediate Open Access (OA).
These approaches are referred to as “Transformative Arrangements”
and include Transformative Agreements, Transformative Model
Agreements and Transformative Journals.
47. Growth of Open Access Repositories
https://v2.sherpa.ac.uk/view/repository_visualisations/1.html
48. DIGITAL.CSIC
• Clasificado como el 5o
mayor repositorio europeo
• 120 Instituciones
• Equipo de bibliotecarios expertos
• Más de 130,000 artículos en acceso abierto
• Perseverancia digital, DOIs
• Almacenamiento de datos y código
https://digital.csic.es
49. NSAP (2010): Una propuesta disruptiva
Perakakis, P., Taylor, M., & Trachana, V. (2010). Natural Selection of Academic
Papers. Scientometrics, 85(2), 553–559.
59. Conclusiones
• Conflicto de intereses entre el negocio editorial y los procesos
básicos de la ciencia.
• Los repositorios institucionales ofrecen una infraestructura
editorial superior.
• Las revistas académicas no necesitan a las editoriales (al revés).
• El control de los procesos de la validación, evaluación,
diseminación (...) permitirá adecuarlos a los intereses de la
ciencia y la sociedad.
60. Sugerencias
• Redirigir la financiación de las editoriales a las infraestructuras
públicas y abiertas.
• Sustituir los acuerdos transformativos por procesos de
licitación estándar.
• Las agencias de financiación pueden exigir unos estándares
mínimos de infraestructuras y políticas en las organizaciones
que realizan investigación como condición para las
subvenciones.
• El control de los procesos de la validación, evaluación,
diseminación (...) permitirá adecuarlos a los intereses de la
ciencia y la sociedad.
• Dejar de depender de métricas de prestigio y desarrollar
sistemas nuevos, modernos y adaptables para evaluar la
calidad de los trabajos de investigación.