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Geometrical Isomerism
Mr.P.S.Kore
Assistant Professor(Research Scholar)
Department of Pharmaceutical Chemistry
RCP, Kasegaon.
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Types of Stereoisomerism
Stereoisomerism is of two types
1. Geometrical or Cis-Trans Isomerism
2. Optical Isomerism
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Stereoisomerism
• When isomerism is caused by the different arrangements of atoms or
groups in space, the phenomenon is called Stereoisomerism (Greek,
Stereos = occupying space).
• The stereoisomers have the same structural formulas but differ in
arrangement of atoms in space. In other words, stereoisomerism is
exhibited by such compounds which have identical molecular structure but
different configurations. Configuration refers to the 3-dimentional
arrangement of atoms that characterizes a particular compound.
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Geometrical (Cis-Trans Isomerism)
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Geometrical (Cis-Trans Isomerism)
The different geometrical arrangements of the groups about the doubly bonded
carbon atom is known as Geometrical isomerism.
When the similar groups lie on the same side it is called the Cis isomer (Latin,
cis.=on same side). When similar groups are on the opposite sides, it is called the
trans isomer (Latin, trans=across).
Consequently this type of Isomerism is often spoken of as Cis-Trans Isomerism.
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Geometric isomers possess the same structural formula
containing a double bond and differ only in respect of the
arrangement of atoms or groups about the double bond.
In general we could say that Geometrical isomerism is shown
by alkenes or their derivatives in which two different atoms or
groups are attached to each carbon containing the double bond
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Geometric Isomerism in Alkenes
The carbon atom of carbon-carbon double bond are sp2 hybridized. The C-C
double bond consist of a sigma bond and a pi-bond. The sigma bond is formed
via the overlap of sp2 hybrid orbitals, while the pi-bond is formed by the overlap
of p- orbitals.
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The presence of pi-bond locks the molecule in one position. The two carbon
atoms of the C=C bond and the four atoms that are attached to them lie in one
plane and their position in space are fixed. Therefore, rotation around the C=C
bond is not possible because rotation would break the pi-bond.
This restriction about the carbon double bond is responsible for the
geometric isomerism in alkenes.
To understand, take two boards and two nails. Driving one nail through two
boards will not prevent free rotation, but once the second nail is used, then the
boards cannot be freely rotated.
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For example 2-butene exists in two special arrangements i.e., cis-2-butene and trans-2-butene
These two compounds are referred to as geometric isomers and are distinguished
from each other by the term cis or trans.
The cis isomer is one in which the two similar groups are on the same side of
the double bond. While, the trans isomer has two similar groups on the
opposite sides of the double bond. Such type of isomerism is therefore often
called cis-trans isomerism. These geometric isomers are stereoisomers because
they have the same structural formula but different arrangement of atoms in
space.
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Conversion of cis isomer into trans isomer
This conversion is only possible if either isomer is heated to a high temperature
or it absorb light. The heat supplies about 62 kcal/mole energy which cause the
breaking of pi-bond and thus rotation around the sigma bond become possible.
Upon cooling, the reformation of pi-bond takes place and gives a mixture of trans
and cis isomer. For Example consider cis-2-butene conversion is as follows
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Stability
The trans isomers are more stable than the corresponding cis isomer
because in cis isomer the bulky groups are on the same side of the
double bond. The steric repulsion of the groups make the cis isomer
least stable.
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All alkenes do not show geometric isomerism. It is only possible when each
double bonded carbon atom is attached to two different atoms or groups.
For example: Propene CH3CH2=CH2
In propene geometric isomerism is not possible because one carbon on the
double bonded carbon has two identical groups ( H atoms) attached to it.
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3-Hexene CH3CH2CH=CHCH2CH3
Geometric isomerism is possible because each double bonded carbon is attachedto
two different groups ( CH3CH2 and H) attached to it.
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Butenedioic Acid COOH-CH=CH-COOH
Geometric isomerism is possible because each double bonded carbon is attachedto
two different groups ( COOH and H) attached to it.
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These isomers differ in physical properties such as melting point, dipole moment,
and acidities. The trans isomer has no dipole, since it is symmetrical unlike cis
isomer. Cis-isomer is strong acid than trans-isomer. In Butenedioic acids even the
chemical properties are different because the cis-Butenedioic acid undergoes
dehydration at 100 degrees.
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However, the trans-acid does not form anhydride until heated at 240 degrees. At
that temperature there is sufficient thermal energy to break the double bond, so
that the cis and trans isomers are formed in succession.
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Assigning Configurations to Alkenes
• Two systems such as cis-trans system and E-Z system can be used to
designate the configurations of alkenes
• Cis-Trans System: The most common system. Cis-isomer have the
substituents on the same side, while trans-isomer have the substituents on
the opposite side.
• The configuration of geometric isomers can be designated as cis or trans
but for some alkenes, this cis-trans method does not work when there are
there are four different groups on the double bond such as BrClC=CFI
(1-bromo-1-chloro-2-fluoro-2-iodoethene)
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So in this case then the configuration of these isomers and all other geometrical
isomers can be specified by the E-Z system.
E-Z System:
This system can be used to specify the configuration about any carbon-carbon
double bond unambiguously by using a set of priority rules. This system is
devised in 1964 by R.S. Cahn, C.K. Ingold and V. Prelog.
Z derived from German, zusammen = together, whereas, E from German,
entgegen = opposite
•Z-alkenes have the groups of highest priority on the same sides.
•E-alkenes have the groups of highest priority on the opposite sides
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The E-Z system is based on a set of "priority rules", which allow
you to rank any groups.
The general strategy of the E-Z system is to analyze the two groups
at each end of the double bond. At each end, rank the two groups,
using the CIP priority rules. Then, see whether the higher priority
group at one end of the double bond and the higher priority group at
the other end of the double bond are on the same side (Z, from
German zusammen = together) or on opposite sides (E, from
German entgegen = opposite) of the double bond.
There are four CIP priority rules
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Rule 1:
Each atom is assigned a priority. Priority is based on atomic number; higher the
atomic number, the higher the priority
Rule 2:
For isotopes, the higher the atomic mass the higher the priority. For
example, deuterium (Hydrogen-2) has higher priority than protium
(Hydrogen-1)
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Rule 3: If priority cannot be assigned on the basis of atomic number or atomic
mass considering the first atom of a group, then look at the next set of atoms and
continue until a priority can be assigned. Priority can be assigned at the first point of
difference.
If the atoms directly linked to the double bond are the same, then the second, third,
fourth, etc. atoms (away from the double bond) are ranked until a difference is
found.
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Rule 4: In the case of double or triple bonds, atoms participating in the double or
triple bond are considered to be bonded to an equivalent number of similar atoms by
single bonds, that is, atoms of double and triple bonds are replicated.
Multiple (double or triple) bonds are assumed to have the same
number of single-bonded atoms.
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To assign E-Z system, first determine the groups of highest priority on
each carbon. If the two highest priority groups are on the same side of
the double bond, the configuration is Z. If they are on opposite side of
the double bond then the configuration is E.
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EXAMPLE 1: BUTENE
Start with the left hand structure (the cis isomer). On C2 (the left end of the double bond), the two
atoms attached to the double bond are C and H. By the CIP priority rules, C is higher priority than H
(higher atomic number). Now look at C3 (the right end of the double bond). Similarly, the atoms are
C and H, with C being higher priority. We see that the higher priority group is "down" at C2 and
"down" at C3. Since the two priority groups are both on the same side of the double bond ("down",
in this case), they are zusammen = together. Therefore, this is (Z)-2-butene.
Now look at the right hand structure (the trans isomer). In this case, the priority group is "down" on
the left end of the double bond and "up" on the right end of the double bond. Since the two priority
groups are on opposite sides of the double bond, they are entgegen = opposite. Therefore, this is (E)-
2- butene.
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E-Z will always work, even when cis-trans
fails The figure shows two isomers of an alkene
with four different groups on the double bond,
1-bromo-2-chloro-2-fluoro-1-iodoethene.
It is impossible to name them as cis or trans. While, the E-Z system works fine.
Consider the left hand structure. On C1 (the left end of the double bond), the two atoms attached to
the double bond are Br and I. By the CIP priority rules, I is higher priority than Br (higher atomic
number). Now look at C2. The atoms are Cl and F, with Cl being higher priority. We see that the
higher priority group is "down" at C1 and "down" at C2. Since the two priority groups are both on
the same side of the double bond ("down", in this case), they are zusammen = together. Therefore,
this is the (Z) isomer. Similarly, the right hand structure is (E).
So the real advantage of the E-Z system is that it will always work. In contrast, thecis-trans
system breaks down with many ambiguous cases.
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E-Z will work, but may not agree with cis-trans
How you will name 2-bromo-2-butene??
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E-Z will work, but may not agree with cis-trans
This molecule is clearly cis. The two methyl groups are on the same side. More
rigorously, the "parent chain" is cis.
Now Apply the E-Z system.
On the left, the methyl is the high priority group -- because the other group is -H.
On the right, the methyl is the low priority group -- because the other group is -Br.
That is, the high priority groups are -CH3 (left) and -Br (right). Thus the two
priority groups are on opposite sides = entgegen = E.
Note:
This example should convince you that cis and Z are not synonyms. Cis/trans and
E,Z are determined by distinct criteria. There may seem to be a simple
correspondence, but it is not a rule. Be sure to determine cis-trans or E,Z
separately, as needed.
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C
OH
Highest
Br
C
H3C
Lowest
E& Z Nomenclature
Highest
NH2
Lowest
(Z)-1-amino-2-bromoprop-1-en-1-ol
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Geometric Isomerism in Cyclic
Compounds
• Geometric isomerism is also possible in cycloalkanes. There can be no rotation
about carbon-carbon single bonds forming a ring because rotation would break
the bonds and break the ring.
• For example 1,2 dimethylcyclopropane exist in two isomeric forms
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A requirement for geometric isomerism in cyclic compounds is that there
must be at least two other groups besides hydrogens on the ring and these
must be on different ring carbons.
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More Examples of Cis-TransIsomerism
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Geometric Isomerism in Cycloalkenes
Structure formulas of fourCycloalkenes
In these representations, the configuration about each double bond is cis.
Because of angle strain, it is not possible to have a trans configuration in
cycloalkenes of seven or fewer carbons. Therefore, double bonds in
cycloalkenes in seven or fewer carbons are exclusively cis rather than trans.
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To date only trans-cyclooctene is smallest trans-cycloalkene that has been
prepared in pure form and is stable at room temperature. Although in this trans-
cycloalkene form there is considerable intramolecular strain.
For an alkene with one carbon-carbon double bond that can show cis-trans
isomerism, two cis-trans isomers are possible. So far an alkene with n number
of carbon-carbon double bonds, each of which can show cis-trans isomerism,
2n cis- transisomers are possible.
Vitamin A is a biologically important compound for which a number of cis-trans
isomers are possible. There are four carbon-carbon double bonds in the chain of
carbon atoms bonded to the substituted cycloalkene ring, and each has the
potential for cis-trans isomerism. Thus 24 = 16 cis-trans isomers are possible.
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Geometric Isomerism in Oximes and
AZO Compounds
Geometric isomerism is also possible in compounds containing
oximes (C=N) and Azo compounds (N=N). Like alkenes, both
double bonded carbon and nitrogen are sp2 hybridized. The lone-
pair electrons on nitrogen resides in the sp2 hybrid orbitals. The
lone pair fixes the position of all substituents around C=N
and N= N double bonds, thus resulting in geometric
isomerism.
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Syn- Anti Isomerism
When Compound Possess the C=N, N=N in the organic compounds,
they can follow Syn- Anti Configuration .
When same substituent's on same side of Double bond,
they are Syn Isomer
When same substituent's on opposite plane are considered
as Anti- isomer
C N
H H
H 3 C
Syn - ethanimine
C N
H 3 C H
H
Anti- ethanimine
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Syn- Anti Isomerism
N N
N N
H
In case diazene only two substituent's can attach, but they differed on the
basis of attachment on nitrogen in same plane or opposite plane.
H
H H
d ia z en e
d iaz en e
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Syn- Anti Isomerism
In case of cyanide and N-oximes Hydrogen and Hydroxyl group are
considered similar atoms
C N
H O H
C N
H 3 C H
H O
Anti - acetimidic a c i d
H 3 C
S y n - a c e t i mi d i c acid
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E & Z Nomenclature for Aldoxime.
Nomenclature is determined by CIP rule
only
1. Assign priority 2. Give E& Z
Nomenclature
C N
3
H C
OH
H
(Z)-acetaldehyde
oxime (Anti)
C N
H3C
H OH
(E)-acetaldehyde oxime
(Syn)
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Determination of geometrical Configuration
A. Physical Property:
1.Dipole Moment
2. Melting Point
3. Solubility
4. Action of Heat
5. Acid Strength
6. Optical Activity
7. Steric Factor
B. Chemical Property
methods: 1.Cyclization
2.Heat of hydrogenation
3.N-Oxime formation
4.Conversion into Known
configuration
C. Instrumental methods:
1.X-ray diffraction
2. IR Spectroscopy
3. NMR Spectroscopy
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The trans isomer has a dipole moment of zero, because the two bond moments C-Cl
bonds are opposed because of the symmetry of the molecule. On the other hand, the
cis isomer being non-symmetrical has dipole moment because the bond moments are
not opposed here.
In such alkenes which have one polar substituent different from other, the
dipole moment will not be normally zero but would be smaller than the
corresponding cis isomer.
1. Dipole
Moment:
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If, however, one substituent is electron-donating and the other
electron-withdrawing, the bond moments are fully additive in
trans isomer. Thus the trans isomer in this case has a higher
dipole moment than the corresponding cis isomer.
Therefore, it is possible to assign configuration to a pair of
isomers on the basis of dipole measurements, provided the
nature of substituents is known.
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2. Melting point.
In general, a trans isomer has greater symmetry than the corresponding cis isomer. Thus
it packs more easily in the crystal lattice and hence has a higher melting point. Cis
compounds, on the other hand, have low melting points since they being less
symmetrical do not pack well in the crystal lattice. Moreover, the poor packing leads to
weaker forces of attraction between the molecules in the crystal lattice. The weaker
forces of attraction can be easily broken by the heat or temperature and hence the cis
isomers has lower melting than their trans isomers.
C C
H H
COOH
C C
HOOC H
HOOC
Cis-Malic acid
M.P:129°C
H COOH
Trans- Fumaric acid
M.P: 301°C
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3. Solubility.
Due to poor packing leads to weaker forces of
attraction between the
molecules in the crystal lattice. The weaker forces of attraction can be
easily broken by the dielectric constant of the solvents and hence the cis
isomers have greater solubilities than their trans isomers.
C
C
H
COOH
H
C
C
H
COOH
HOOC
H
COOH
Cis- malic acid
Trans-Fumaric acid
79 gm/100ml 0.7gm/100 ml
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Conversion of cis isomer into trans isomer
This conversion is only possible if either isomer is heated to a high temperature or it
absorb light. The heat supplies about 62 kcal/mole energy which cause the breaking of
pi-bond and thus rotation around the sigma bond become possible. Upon cooling, the
reformation of pi-bond takes place and gives a mixture of trans and cis isomer. For
Example consider cis-2-butene conversion is as follows
4. Action of Heat
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5. Acid Strength:
Cis Isomers has more dipole moments hence it has more power of ionization that
creates cis isomer more acidic
Cis Isomer has more acidic due to its week forces of attraction in crystal lattice and
strong attractive force towards action dipole moments of solvents.
Trans isomer has lesser or negligible dipole moments and hence it has low power
of ionization and hence trans isomer are less acidic.
Trans isomer less acidic due to strong forces of attraction in lattice and week forces
of attraction towards action solvents.
C
C
H
COOH
H
C
C
H
COOH
HOOC
H
COOH
Cis- malic acid
Trans-Fumaric acid
More acidic Less acidic
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6. OpticalActivity:
Depends upon plane symmetry Cis& Trans Isomerism differentiated.
Example: Cis Hexahydrophthalic acid shows plane of symmetry and hence it optical
inactive while trans Hexahydrophthalic acid does not shows plane of symmetry hence
it is optically active
COOH
COOH
H
H
Cis- hexahydrophthalic
acid
COOH
H
H
COOH
Trans- Hexhydrophthalic
acid
Internal Plane symmetry
(Optical Inactive)
No Internal Plane of symmetry
(Optical Active)
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7. Steric factor
The trans isomers are more stable than the corresponding cis isomer
because in cis isomer the bulky groups are on the same side of the
double bond. The steric repulsion of the groups make the cis isomer
least stable.
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B. chemical methods
takes
1. Cyclization
The formation of a cyclic molecule from an
open chain molecule place easily only when the reacting
groups are close to each other.
This fact has been most useful in assigning
configurationto cis-
trans
isomers in which the doubly bound carbon atoms carry groups that are
capable of reacting with each other, The configuration of maleic and fumaric
acids is established on this basis.
Maleic acid readily forms cyclic anhydride whereas fumaric acid does
not.
This means that in maleic acid the two groups are nearer to each other
than they are in fumaric acid.
That is, obviously maleic acid is the cis form and fumaric acid the
trans form.
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2. Heat of
Hydrogenation:
CH2 C CH2
CH3 + H2 CH3 CH2 C CH3
H2
H =-127KJ mol-1
C C
+ H2 CH3 CH2
H2
C CH3 H =-120KJ mol-1
+ H2 CH3 CH2 C
H2
CH3 H =-115KJ mol-1
CH3
H
H
Cis
C C
H CH3
3
H C
H
Trans
1-Butene evolves the greatest amount of heat when hydrogenated, and trans-2-butene evolves
the least.
1-Butene must have the greatest energy (enthalpy) and be the least stable isomer.
Trans-2-Butene must have the lowest energy (enthalpy) and be the most stable isomer
Pt
Pt
Pt
butane
but-1-ene H
H3C
The order of stability is trans-2-butene > cis-2-butene > 1-butene.
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Energy Profile Diagram of stability of Cis-trans Isomers of Butene
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3. Formation of Oximes
C O
H3C
+ H2N
OH
-H2O
C N
(Z)
H3C OH
H
(Z)-acetaldehyde oxime
C
H3C
O + H2N
OH
-H2O
C N
(E)
H3C OH
H3C H2C
(E)-butan-2-one oxime
H
acetaldehyde
H3C CH2
butan-2-one
Depend on the starting material used in oximes formation E& Z
Nomenclature
determined
When acetaldehyde reacts with hydroxyl amine to form Z isomer
When Butanone reacts with hydroxyl amine to form E isomer
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4. Conversion into Known Configuration
If Trichlorochrotonic acid coverted into fumaric acid with help of
hydrolysis then it confirms that starting material was Trans Trichloro
Chromtonic acid
If Trichlorochrotonic acid Not coverted into fumaric acid with help of
hydrolysis then it confirms that starting material was Cis Trichloro
Chromtonic acid.
From above Cis-Trans isomerism is determined on the basis of formation
of fumaric acid.
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4. Conversion into Known configuration
C C
COOH
H
3
Cl C
H
2H2O
C C
COOH
HOOC
H
C C
COOH
H
H3C
H
3H2
Cis- Chrotonic acid
Cis- Trichloro chrotonic acid
C C
COOH
H
H
Cl3C
C C
COOH
H
H
HOOC
Tans-Fumaric acid
C C
COOH
H
H
H3C
3H2
Trans- Chrotonic acid
Trans-Trichloro
chrotonic acid
H
Cis- Malic acid
-3HCl
2H2O
-3HCl
-3HCl
-3HCl
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Instrumental Technique:
1.X-ray Diffraction: Crystals of Trans isomers are easily identified because presence
of crystal lattice while cis form does not contains crystal lattice
2.IR Spectroscopy:Trans isomer shows band at 970-960cm-1 while cis
will not shows band at wave numbers
3.NMR Spectroscopy:Protons presentat both isomers
having different coupling
constant.
Example: Trans Cinnamic acid has larger coupling constant than Cis Isomer
C C
(Z)
H
C H
6 5
H
COOH
Cis- Cinnamic acid
J=12Hz
H (E)
C C
C6H5
COOH
H
Trans- Cinnamic acid
J=16Hz
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Conformational Isomerism
• Conformational isomers are different shapes of the same
molecule resulting from rotation around a single C-C bond.
They are not different compounds (i.e. they have the same
physical and chemical properties) and are readily
interconvertible
• Conformational isomerism is a form of stereoisomerism in
which the isomers can be interconverted just by rotations about
formally single bonds.
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Conformation:
The different arrangements of atoms caused by rotation about a single bond are
called conformations.
Conformer:
A conformer (or conformational isomer) is a
compound with a particular
conformation.
Conformational isomers can be represented by
Sawhorse representations or Newman projections.
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Conformations of Ethane (CH3-CH3)
Rotation around the C-C bond produces two distinctive conformations.
1. Eclipsed Conformation: C-H bonds on each carbon atom
are as close as possible.
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2. Staggered conformation: C-H bonds on each carbon atom are as far apart
as possible.
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Torsion Angle/Dihedral angle:
The angle Between Front and Back hydrogen is called as torsion angle and easily seen
in Newman Projection
In Eclipsed confirmation dihedral angle is 0° and due to steric repulsion torsion energy
is higher in eclipsed and that makes less stable
In staggered confirmation atoms are far away and dihedral angle is more i,e 60° and
hence steric repulsion is low and less torsion energy and that makes more stable
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Rotation of Conformation
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Torsional Strain
Torsional strain or eclipsing strain is the increase in potential energy of a molecule
due to repulsion between electrons in bonds that do not share an atom. Consider two
conformations of ethane:
The smallest dihedral angle is 60º in 1; it is 0º in 2. Thus, two C-H bonds not
sharing a carbon atom that are closest to each other (ex: C-H1 and C-H4) are closer
in 2 than in 1. The repulsion between electrons greater in 2 than in 1. Consequently,
torsional strain is greater in 2 than in 1.
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Steric Strain
Steric strain is the increase in potential energy of a molecule due to repulsion
between electrons in atoms that are not directly bonded to each other.
Consider two staggered conformations of 1,2-dibromoethane:
In 1, the Br atoms are closer to each other than they are in 2 (in 1, the dihedral angle
between the bromine atoms is 60º; in 2, it is 180º). Thus, the repulsion between
electrons in one bromine atom and those in the other is greater in 1 than in 2. Thus,
steric strain is greater in 1 than in 2. (Since the Br atoms are pointing in opposite
directions in 2, there is no steric strain in 2 due to interaction between the Br atoms.)
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Energy Profile Diagram of conformation of ethane
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The staggered conformation is more stable as the C-H bonds are further apart.
The energy difference between them (12 kJmol−1) is known as the torsional
strain. This energy difference is relatively small, and hence there is free
rotation about the C-C bond at room temperature.
The angle between the front and back hydrogen is dihedral (or torsional) angle.
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Conformations of butane (CH3CH2CH2CH3)
In butane, the staggered conformations do not all have the same energy.
1.Eclipsed Conformation: Two Methyl Groups are closer together and high steric
energy and this conformation is least stable(4.6Kcal)
2.The gauche (or synclinal): Two methyl groups are near one another (60°
separation), resulting in steric
between two groups, whichare
strain. Steric strain is the repulsive interaction
closer to one another than their atomic radii allow.
Gauche conformation has 0.9 Kcal energy. More stable than eclipsed conformation
3.The anti- (or antiperiplanar or staggered ) conformation is the most stable as the
two methyl groups are as far apart as possible (180° separation). Energy is 0 Kcal
R.C.P.KASEGAON
Energy Profile Diagram of n-
Butane
R.C.P.KASEGAON
Conformation Analysis of n-Butane
A) Eclipsed Conformation
1. Syn- periplanar: Dihedral angle 0°(4.6 Kcal)
2. anti-Clinical: Dihedral Angle 120°(3.6Kcal)
B) Staggered Conformation
1. Gauche(Syn- Clinical): Dihedral angle 60°(0.9Kcal)
2. Anti- Periplanar: Dihedral Angle 180°(0Kcal)
Energy rank order:
Syn-Periplanar> anti-clinical>Gauche(Syn-clinical>Anti-periplanar)
Stability Rank Order:
Anti-periplanar>Gauche>anti-clinical>>syn-periplanar
R.C.P.KASEGAON
The most stable conformation for a straight-chain alkane is a zigzag shape, as the
alkyl groups are as far apart as possible. (This is why we draw alkyl chains with a
zigzag structure.)
It should be noted that when the methyl groups in butane are eclipsed and are in
the same plane (0° separation), this is known as the syn- periplanar conformation.)
R.C.P.KASEGAON
Conformations of cycloalkanes
The shape of cycloalkanes is determined by
torsional strain,steric strain and angle strain.
Angle strain: For an sp3 hybridized carbon atom, the ideal bond angle is 109.5°
(tetrahedral). Angle strain is the extra energy that a compound has because of
non-ideal bond angles (i.e. angles above or below 109.5°) e.g. Cyclopropane.
Due to the rigidity of the cyclopropane ring it could assume only one
conformation, namely the planar conformation.
R.C.P.KASEGAON
R.C.P.KASEGAON
rings are
Cyclopentane (5-membered) and cyclohexane (6-membered)
therefore the most stable and, consequently, the most easily formed.
Cycloalkanes can adopt different conformations (or shapes): Cyclopropane is
flat, cyclobutane can form a butterfly shape, while cyclopentane can form an
open-envelope shape.
R.C.P.KASEGAON
Cyclopropane has to be planar and therefore has very strained bond angles of
60° and a great deal of torsional energy. However, cyclobutane and
cyclopentane can adopt non-planar (puckered) shapes which decrease the
torsional strain by staggering the C-H bonds. However, this is at the expense of
angle strain, and the butterfly and open-envelope shapes represent the best
compromise between the two opposing effects.
R.C.P.KASEGAON
Cyclohexane
• Cyclohexane adopts the chair or boat conformations, which
are both free of angle strain. However, the boat conformation is
less stable because of steric strain between the C-1 and C-4
hydrogen's.
• All carbons are sp3 hybridized and creates 109° bond angle
• The two chair forms can interconvert via the boat form in a
process known as ring-flipping.
R.C.P.KASEGAON
Chair Conformation of Cyclohexane:
1.Chair Conformation of cyclohexane contains 12 hydrogen's
Cyclohexane
2. Six hydrogen's are in axial and remaining Six hydrogen's are in equatorial
H
H
H
H
H
H
Axial hydrogens
H
H
H
H
H
H
equatorial hydrogens
H
H
H
H
H
H
H
H
H
H
H
H
Axial & Equatorial
1
2
4
3
5
6
R.C.P.KASEGAON
Boat Conformation of Cyclohexane:
1.Boat Conformation of cyclohexane contains 12 hydrogen's
2. Six hydrogen's are in axial and remaining Six hydrogen's are in equatorial
3. Hydrogen's at C1 and C4 are close together and creates steric strain, Hence
boat form is less stable
H H
H
H
H
H
H H
H
H
H
H
H H
H
H
H
H
H
H
H
H
H
H
1
2
Boat
3
4
5
6
R.C.P.KASEGAON
R.C.P.KASEGAON
The chair conformation has six axial and six equatorial hydrogens. On
ring-flipping, the axial hydrogens become equatorial and the equatorial
hydrogens become axial.
R.C.P.KASEGAON
Energy profile Diagram of
Cyclohexane
R.C.P.KASEGAON
Conformational Analysis of Cyclohexane
chair
half chair
12.1 kcal/mole
twist boat form
5.3 kcal/mole
boat f o r m
6.8 kcal/mole
Chair form is highly stable conformation
Half chair form is highly unstable conformation
Twisted boat form is more than boat and half chair form but less stable
than
chair form
Boat form is more stable than half chair form but less stable than
chair and
twisted boat form
R.C.P.KASEGAON
If a substituent (X) is present, then this prefers to sit in an equatorial
position. The equatorial conformer is lower in energy because steric strain
(or 1,3-diaxial interactions) raises the energy of the axial conformer. As
the size of the X group increases, so does the proportion of the equatorial
conformer at equilibrium.
R.C.P.KASEGAON
For disubstituted cyclohexanes, both groups should sit in an equatorial
position. When this is not possible, then the largest group (e.g. a t-Bu
group rather than a Me group) will sit in the equatorial position.
R.C.P.KASEGAON
When the two substituents on the ring are both pointing up (or both
pointing down), these cyclic compounds are designated cis
stereoisomers. When one substituent is pointing up and the other down,
these cyclic compounds are designated trans-stereoisomers
R.C.P.KASEGAON
Stereo specific Reaction and Stereo selective reaction
Stereo selective reaction: Any reaction in which only one
set of stereo isomers is formed exclusively from all
possible isomer and does not depends upon
stereochemistry of starting material
Stereo Specific Reaction: The reaction in which
stereochemistry of product is determined by
stereochemistry of starting material.
Comments: All stereo selective reactions are stero specific
R.C.P.KASEGAON
Stereo specific reaction:
C
H
C
H
CH3
H3C C C CH3
H3C
Reaction of bromine with 2-butene to form 2,3 dibromo butane
2,3 dibromo butane has 2 chiral centre hence creates 4 isomer, 2 are
enantiomer and 2 are mesomer.
H H
Br2
Br Br
2,3-dibromobutane
but-2-ene
R.C.P.KASEGAON
Stereo specific reaction:
Cis-2 butene produces only a pair of enantiomer as a racemic mixture,
there is no formation of mesomer,
A reaction which produce only one set of isomer stereo isomer are called
stereo selective reaction
This reaction is stereo specific because Enantiomer formation
requires Cis 2-butene which is stereo isomer.(Stereochemistry of product
depends on stereochemistry of starting material)
C
C
H 3 C H
Br2 C
C H 3
Br
H
C
C
C H 3
C H 3
H
B r
Br
H
+
H 3 C H
Cis-2 Butene
Br C H
CH3
2,3-dibromobutane
(2S,3S)
2,3-dibromobutane
(2R,3R)
R.C.P.KASEGAON
Stereo specific reaction:
Trans – Butene produce set of mesomer not enantiomer
This reaction also stereo selective reaction because only one set isomer
produced exclusively.
This reaction is stereo specific because mesomer formation requires trans
2-butene which is stereo isomer.
C
C
H
H3 C
Br2 C
CH3
Br
H
C
C
CH3
C H 3
H
H
Br
Br
+
H CH3
Trans-2 Butene
H C Br
CH3
2,3-dibromobutane
(Meso)
2,3-dibromobutane
(Meso)
R.C.P.KASEGAON
Stereo specific reaction:
Mechanism
C
C
(Z)
H
CH3
H
CH3
Br-Br
C
C
H
CH3
H
CH3
Br
Br
a
b
a
b
C
C
C
C
CH3
H
Br
H
Br
H
Br
CH3
CH3
A
H
Br
CH3
B
Anti Addition of Bromine
Substrate is Cis-2- Butene
R.C.P.KASEGAON
Stereo specific reaction: Mechanism
Step-1 formation of Cis-brominium ion
Step-2 Attack of bromide to bromine intermediate It have 2 possible
pathway
If attack follows pathway a then structure A is Produced if attack
follows pathway b the structure B is produced.
Product formation depends upon pathway followed by substrate is called
stereo specific
R.C.P.KASEGAON
Stereo specific reaction: Mechanism
C
C
(E)
H
CH3
H3C
H
Br-Br
C
C
H
CH3
H3C
H
Br
Br
c
d
a
b
C
C
C
C
H
CH3
3
H C
Br
H
CH3
Br
H3C
H
Br
C
Br
H
D
Anti Addition of Bromine
Substrate is Trans-2- Butene
(S)
Br
H
(R)
Br
H
CH3
(R)
CH3
H
Br
(S)
H
Br
Meso
CH3
Meso
R.C.P.KASEGAON
Stereo specific reaction: Mechanism
Step-1 formation of Trans-brominium ion
Step-2 Attack of bromide to bromine intermediate
It have 2 possible pathway
If attack follows pathway c then structure C is Produced
if attack follows pathway d the structure D is produced.
Only One set of isomer produced hence follows hence is stereo selective reaction
and set of isomer formation depends on stereo chemistry of substrate mean meso
compounds reqiures trans substrate.
Hence bromination 2- butene is stereo specific and stereo selective reaction
R.C.P.KASEGAON
Stereo Selective reaction:
Formation of one set of isomer but it does not depends on stereo chemistry of
substrate
Epoxidation of alkene by H2O2
 Only trans epoxide is formed hence it stereo selective
Product not depends on stereo chemistry substrate means Cis or Trans
isomer gives only trans epoxide
R.C.P.KASEGAON
(Z)
S
O
H H
(E)
S
O
H
H
(S)
S
O
(S)
H
H O
(S)
(S)
S
O
H
H O
Trans- Epoxide
Trans Epoxide
Cis
Trans
R.C.P.KASEGAON
Atropisomerism
Biphenyls are compounds whereby a phenyl ring is connected to another
through a central σ bond.
In unsubstituted biphenyl, there is sufficient amount of freedom of rotation
around the central single bond to allow for free interconversion between the
various conformers or rotamers so that the various rotamers cannot exist
independently.
R.C.P.KASEGAON
Atropisomerism
Biphenyls with large substituent's at the ortho positions on either side of the
central σ bond experience restricted rotation along this bond due to steric
hindrance.
If the substituent's are different, a chiral molecule existing as a pair of enantiomers
called atropisomers .
Polynuclear aromatic systems such as binol also exist as enantiomers.
OH
HO OH
HO
Mirror
Specific rotation=+35.5
Specific rotation=-35.5
R.C.P.KASEGAON
Atropisomerism
Atropisomerism are stereo isomers as a result of restricted rotation about a single
bond.
Atropisomers are stereoisomer's resulting from hindered rotation about single
bonds where the steric strain barrier to rotation is high enough to allow for the
isolation of the conformers (from Greek, a = not and tropos = turn).
If bulky group on ortho position of bi-phenyl or strained ring structural features.
Bulky substituent's or strained rings may enhance the barrier to rotation between two
distinct conformations to such an extent as to allow observation of atropisomers .
Atropisomerism is also called axial chirality and the chirality is not simply a centre
or a plane but an axis.
R.C.P.KASEGAON
Atropisomerism
Symmetrical-Achiral
(R)
O2N
NO2
(S)
NO2
COOH
NO2
COOH
COOH
HOOC
R- 6,6
dinitroph
enyl-2,2
dicarbox
ylic acid
S- 6,6 dinitrophenyl-2,2
dicarboxylic acid
C-C- Sigma Bond or pivotal bond
Biphenyl substituted on ortho position, which contains a chiral axis along the biphenyl linkage.
The biphenyl rings are perpendicular to each other in order to minimize steric clashes
between the four ortho substituent's meaning that rotation about the biphenyl bond through
pivotal bond is restricted
R.C.P.KASEGAON
Conditions of Atropisomerism
A rotationally stable axis .
Presence of different substituent's on both sides of the axis.
The configuration stability of axially chiral biaryl compounds is mainly determined
by three following factors
1.The combined steric demand of the substituent in the combined steric demand of
the substituent's in the proximity of the axis
2.The existence, length and rigidity of bridges.
3.Atropisomerisation mechanism different from a merely physical rotation about the
axis, e.g. photo chemically or chemically induced processes
R.C.P.KASEGAON
Conditions for Optical Activity
Four different substituent's should be attached
Non Super mirror Image of each other
Non symmetrical nature means absence Plane/Centre/Axis
symmetry.
Substituted Biphenyl compound satisfies all above criteria hence
Substituted biphenyls are optically active compound
R.C.P.KASEGAON

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Geometerical Isomerism.ppt

  • 1. Geometrical Isomerism Mr.P.S.Kore Assistant Professor(Research Scholar) Department of Pharmaceutical Chemistry RCP, Kasegaon. R.C.P.KASEGAON
  • 2. Types of Stereoisomerism Stereoisomerism is of two types 1. Geometrical or Cis-Trans Isomerism 2. Optical Isomerism R.C.P.KASEGAON
  • 3. Stereoisomerism • When isomerism is caused by the different arrangements of atoms or groups in space, the phenomenon is called Stereoisomerism (Greek, Stereos = occupying space). • The stereoisomers have the same structural formulas but differ in arrangement of atoms in space. In other words, stereoisomerism is exhibited by such compounds which have identical molecular structure but different configurations. Configuration refers to the 3-dimentional arrangement of atoms that characterizes a particular compound. R.C.P.KASEGAON
  • 5. Geometrical (Cis-Trans Isomerism) The different geometrical arrangements of the groups about the doubly bonded carbon atom is known as Geometrical isomerism. When the similar groups lie on the same side it is called the Cis isomer (Latin, cis.=on same side). When similar groups are on the opposite sides, it is called the trans isomer (Latin, trans=across). Consequently this type of Isomerism is often spoken of as Cis-Trans Isomerism. R.C.P.KASEGAON
  • 6. Geometric isomers possess the same structural formula containing a double bond and differ only in respect of the arrangement of atoms or groups about the double bond. In general we could say that Geometrical isomerism is shown by alkenes or their derivatives in which two different atoms or groups are attached to each carbon containing the double bond R.C.P.KASEGAON
  • 7. Geometric Isomerism in Alkenes The carbon atom of carbon-carbon double bond are sp2 hybridized. The C-C double bond consist of a sigma bond and a pi-bond. The sigma bond is formed via the overlap of sp2 hybrid orbitals, while the pi-bond is formed by the overlap of p- orbitals. R.C.P.KASEGAON
  • 8. The presence of pi-bond locks the molecule in one position. The two carbon atoms of the C=C bond and the four atoms that are attached to them lie in one plane and their position in space are fixed. Therefore, rotation around the C=C bond is not possible because rotation would break the pi-bond. This restriction about the carbon double bond is responsible for the geometric isomerism in alkenes. To understand, take two boards and two nails. Driving one nail through two boards will not prevent free rotation, but once the second nail is used, then the boards cannot be freely rotated. R.C.P.KASEGAON
  • 9. For example 2-butene exists in two special arrangements i.e., cis-2-butene and trans-2-butene These two compounds are referred to as geometric isomers and are distinguished from each other by the term cis or trans. The cis isomer is one in which the two similar groups are on the same side of the double bond. While, the trans isomer has two similar groups on the opposite sides of the double bond. Such type of isomerism is therefore often called cis-trans isomerism. These geometric isomers are stereoisomers because they have the same structural formula but different arrangement of atoms in space. R.C.P.KASEGAON
  • 10. Conversion of cis isomer into trans isomer This conversion is only possible if either isomer is heated to a high temperature or it absorb light. The heat supplies about 62 kcal/mole energy which cause the breaking of pi-bond and thus rotation around the sigma bond become possible. Upon cooling, the reformation of pi-bond takes place and gives a mixture of trans and cis isomer. For Example consider cis-2-butene conversion is as follows R.C.P.KASEGAON
  • 11. Stability The trans isomers are more stable than the corresponding cis isomer because in cis isomer the bulky groups are on the same side of the double bond. The steric repulsion of the groups make the cis isomer least stable. R.C.P.KASEGAON
  • 12. All alkenes do not show geometric isomerism. It is only possible when each double bonded carbon atom is attached to two different atoms or groups. For example: Propene CH3CH2=CH2 In propene geometric isomerism is not possible because one carbon on the double bonded carbon has two identical groups ( H atoms) attached to it. R.C.P.KASEGAON
  • 13. 3-Hexene CH3CH2CH=CHCH2CH3 Geometric isomerism is possible because each double bonded carbon is attachedto two different groups ( CH3CH2 and H) attached to it. R.C.P.KASEGAON
  • 14. Butenedioic Acid COOH-CH=CH-COOH Geometric isomerism is possible because each double bonded carbon is attachedto two different groups ( COOH and H) attached to it. R.C.P.KASEGAON
  • 15. These isomers differ in physical properties such as melting point, dipole moment, and acidities. The trans isomer has no dipole, since it is symmetrical unlike cis isomer. Cis-isomer is strong acid than trans-isomer. In Butenedioic acids even the chemical properties are different because the cis-Butenedioic acid undergoes dehydration at 100 degrees. R.C.P.KASEGAON
  • 16. However, the trans-acid does not form anhydride until heated at 240 degrees. At that temperature there is sufficient thermal energy to break the double bond, so that the cis and trans isomers are formed in succession. R.C.P.KASEGAON
  • 17. Assigning Configurations to Alkenes • Two systems such as cis-trans system and E-Z system can be used to designate the configurations of alkenes • Cis-Trans System: The most common system. Cis-isomer have the substituents on the same side, while trans-isomer have the substituents on the opposite side. • The configuration of geometric isomers can be designated as cis or trans but for some alkenes, this cis-trans method does not work when there are there are four different groups on the double bond such as BrClC=CFI (1-bromo-1-chloro-2-fluoro-2-iodoethene) R.C.P.KASEGAON
  • 18. So in this case then the configuration of these isomers and all other geometrical isomers can be specified by the E-Z system. E-Z System: This system can be used to specify the configuration about any carbon-carbon double bond unambiguously by using a set of priority rules. This system is devised in 1964 by R.S. Cahn, C.K. Ingold and V. Prelog. Z derived from German, zusammen = together, whereas, E from German, entgegen = opposite •Z-alkenes have the groups of highest priority on the same sides. •E-alkenes have the groups of highest priority on the opposite sides R.C.P.KASEGAON
  • 19. The E-Z system is based on a set of "priority rules", which allow you to rank any groups. The general strategy of the E-Z system is to analyze the two groups at each end of the double bond. At each end, rank the two groups, using the CIP priority rules. Then, see whether the higher priority group at one end of the double bond and the higher priority group at the other end of the double bond are on the same side (Z, from German zusammen = together) or on opposite sides (E, from German entgegen = opposite) of the double bond. There are four CIP priority rules R.C.P.KASEGAON
  • 20. Rule 1: Each atom is assigned a priority. Priority is based on atomic number; higher the atomic number, the higher the priority Rule 2: For isotopes, the higher the atomic mass the higher the priority. For example, deuterium (Hydrogen-2) has higher priority than protium (Hydrogen-1) R.C.P.KASEGAON
  • 21. Rule 3: If priority cannot be assigned on the basis of atomic number or atomic mass considering the first atom of a group, then look at the next set of atoms and continue until a priority can be assigned. Priority can be assigned at the first point of difference. If the atoms directly linked to the double bond are the same, then the second, third, fourth, etc. atoms (away from the double bond) are ranked until a difference is found. R.C.P.KASEGAON
  • 22. Rule 4: In the case of double or triple bonds, atoms participating in the double or triple bond are considered to be bonded to an equivalent number of similar atoms by single bonds, that is, atoms of double and triple bonds are replicated. Multiple (double or triple) bonds are assumed to have the same number of single-bonded atoms. R.C.P.KASEGAON
  • 24. To assign E-Z system, first determine the groups of highest priority on each carbon. If the two highest priority groups are on the same side of the double bond, the configuration is Z. If they are on opposite side of the double bond then the configuration is E. R.C.P.KASEGAON
  • 26. EXAMPLE 1: BUTENE Start with the left hand structure (the cis isomer). On C2 (the left end of the double bond), the two atoms attached to the double bond are C and H. By the CIP priority rules, C is higher priority than H (higher atomic number). Now look at C3 (the right end of the double bond). Similarly, the atoms are C and H, with C being higher priority. We see that the higher priority group is "down" at C2 and "down" at C3. Since the two priority groups are both on the same side of the double bond ("down", in this case), they are zusammen = together. Therefore, this is (Z)-2-butene. Now look at the right hand structure (the trans isomer). In this case, the priority group is "down" on the left end of the double bond and "up" on the right end of the double bond. Since the two priority groups are on opposite sides of the double bond, they are entgegen = opposite. Therefore, this is (E)- 2- butene. R.C.P.KASEGAON
  • 27. E-Z will always work, even when cis-trans fails The figure shows two isomers of an alkene with four different groups on the double bond, 1-bromo-2-chloro-2-fluoro-1-iodoethene. It is impossible to name them as cis or trans. While, the E-Z system works fine. Consider the left hand structure. On C1 (the left end of the double bond), the two atoms attached to the double bond are Br and I. By the CIP priority rules, I is higher priority than Br (higher atomic number). Now look at C2. The atoms are Cl and F, with Cl being higher priority. We see that the higher priority group is "down" at C1 and "down" at C2. Since the two priority groups are both on the same side of the double bond ("down", in this case), they are zusammen = together. Therefore, this is the (Z) isomer. Similarly, the right hand structure is (E). So the real advantage of the E-Z system is that it will always work. In contrast, thecis-trans system breaks down with many ambiguous cases. R.C.P.KASEGAON
  • 28. E-Z will work, but may not agree with cis-trans How you will name 2-bromo-2-butene?? R.C.P.KASEGAON
  • 29. E-Z will work, but may not agree with cis-trans This molecule is clearly cis. The two methyl groups are on the same side. More rigorously, the "parent chain" is cis. Now Apply the E-Z system. On the left, the methyl is the high priority group -- because the other group is -H. On the right, the methyl is the low priority group -- because the other group is -Br. That is, the high priority groups are -CH3 (left) and -Br (right). Thus the two priority groups are on opposite sides = entgegen = E. Note: This example should convince you that cis and Z are not synonyms. Cis/trans and E,Z are determined by distinct criteria. There may seem to be a simple correspondence, but it is not a rule. Be sure to determine cis-trans or E,Z separately, as needed. R.C.P.KASEGAON
  • 31. Geometric Isomerism in Cyclic Compounds • Geometric isomerism is also possible in cycloalkanes. There can be no rotation about carbon-carbon single bonds forming a ring because rotation would break the bonds and break the ring. • For example 1,2 dimethylcyclopropane exist in two isomeric forms R.C.P.KASEGAON
  • 32. A requirement for geometric isomerism in cyclic compounds is that there must be at least two other groups besides hydrogens on the ring and these must be on different ring carbons. R.C.P.KASEGAON
  • 33. More Examples of Cis-TransIsomerism R.C.P.KASEGAON
  • 36. Geometric Isomerism in Cycloalkenes Structure formulas of fourCycloalkenes In these representations, the configuration about each double bond is cis. Because of angle strain, it is not possible to have a trans configuration in cycloalkenes of seven or fewer carbons. Therefore, double bonds in cycloalkenes in seven or fewer carbons are exclusively cis rather than trans. R.C.P.KASEGAON
  • 38. To date only trans-cyclooctene is smallest trans-cycloalkene that has been prepared in pure form and is stable at room temperature. Although in this trans- cycloalkene form there is considerable intramolecular strain. For an alkene with one carbon-carbon double bond that can show cis-trans isomerism, two cis-trans isomers are possible. So far an alkene with n number of carbon-carbon double bonds, each of which can show cis-trans isomerism, 2n cis- transisomers are possible. Vitamin A is a biologically important compound for which a number of cis-trans isomers are possible. There are four carbon-carbon double bonds in the chain of carbon atoms bonded to the substituted cycloalkene ring, and each has the potential for cis-trans isomerism. Thus 24 = 16 cis-trans isomers are possible. R.C.P.KASEGAON
  • 40. Geometric Isomerism in Oximes and AZO Compounds Geometric isomerism is also possible in compounds containing oximes (C=N) and Azo compounds (N=N). Like alkenes, both double bonded carbon and nitrogen are sp2 hybridized. The lone- pair electrons on nitrogen resides in the sp2 hybrid orbitals. The lone pair fixes the position of all substituents around C=N and N= N double bonds, thus resulting in geometric isomerism. R.C.P.KASEGAON
  • 41. Syn- Anti Isomerism When Compound Possess the C=N, N=N in the organic compounds, they can follow Syn- Anti Configuration . When same substituent's on same side of Double bond, they are Syn Isomer When same substituent's on opposite plane are considered as Anti- isomer C N H H H 3 C Syn - ethanimine C N H 3 C H H Anti- ethanimine R.C.P.KASEGAON
  • 42. Syn- Anti Isomerism N N N N H In case diazene only two substituent's can attach, but they differed on the basis of attachment on nitrogen in same plane or opposite plane. H H H d ia z en e d iaz en e R.C.P.KASEGAON
  • 43. Syn- Anti Isomerism In case of cyanide and N-oximes Hydrogen and Hydroxyl group are considered similar atoms C N H O H C N H 3 C H H O Anti - acetimidic a c i d H 3 C S y n - a c e t i mi d i c acid R.C.P.KASEGAON
  • 44. E & Z Nomenclature for Aldoxime. Nomenclature is determined by CIP rule only 1. Assign priority 2. Give E& Z Nomenclature C N 3 H C OH H (Z)-acetaldehyde oxime (Anti) C N H3C H OH (E)-acetaldehyde oxime (Syn) R.C.P.KASEGAON
  • 46. Determination of geometrical Configuration A. Physical Property: 1.Dipole Moment 2. Melting Point 3. Solubility 4. Action of Heat 5. Acid Strength 6. Optical Activity 7. Steric Factor B. Chemical Property methods: 1.Cyclization 2.Heat of hydrogenation 3.N-Oxime formation 4.Conversion into Known configuration C. Instrumental methods: 1.X-ray diffraction 2. IR Spectroscopy 3. NMR Spectroscopy R.C.P.KASEGAON
  • 47. The trans isomer has a dipole moment of zero, because the two bond moments C-Cl bonds are opposed because of the symmetry of the molecule. On the other hand, the cis isomer being non-symmetrical has dipole moment because the bond moments are not opposed here. In such alkenes which have one polar substituent different from other, the dipole moment will not be normally zero but would be smaller than the corresponding cis isomer. 1. Dipole Moment: R.C.P.KASEGAON
  • 48. If, however, one substituent is electron-donating and the other electron-withdrawing, the bond moments are fully additive in trans isomer. Thus the trans isomer in this case has a higher dipole moment than the corresponding cis isomer. Therefore, it is possible to assign configuration to a pair of isomers on the basis of dipole measurements, provided the nature of substituents is known. R.C.P.KASEGAON
  • 49. 2. Melting point. In general, a trans isomer has greater symmetry than the corresponding cis isomer. Thus it packs more easily in the crystal lattice and hence has a higher melting point. Cis compounds, on the other hand, have low melting points since they being less symmetrical do not pack well in the crystal lattice. Moreover, the poor packing leads to weaker forces of attraction between the molecules in the crystal lattice. The weaker forces of attraction can be easily broken by the heat or temperature and hence the cis isomers has lower melting than their trans isomers. C C H H COOH C C HOOC H HOOC Cis-Malic acid M.P:129°C H COOH Trans- Fumaric acid M.P: 301°C R.C.P.KASEGAON
  • 50. 3. Solubility. Due to poor packing leads to weaker forces of attraction between the molecules in the crystal lattice. The weaker forces of attraction can be easily broken by the dielectric constant of the solvents and hence the cis isomers have greater solubilities than their trans isomers. C C H COOH H C C H COOH HOOC H COOH Cis- malic acid Trans-Fumaric acid 79 gm/100ml 0.7gm/100 ml R.C.P.KASEGAON
  • 51. Conversion of cis isomer into trans isomer This conversion is only possible if either isomer is heated to a high temperature or it absorb light. The heat supplies about 62 kcal/mole energy which cause the breaking of pi-bond and thus rotation around the sigma bond become possible. Upon cooling, the reformation of pi-bond takes place and gives a mixture of trans and cis isomer. For Example consider cis-2-butene conversion is as follows 4. Action of Heat R.C.P.KASEGAON
  • 52. 5. Acid Strength: Cis Isomers has more dipole moments hence it has more power of ionization that creates cis isomer more acidic Cis Isomer has more acidic due to its week forces of attraction in crystal lattice and strong attractive force towards action dipole moments of solvents. Trans isomer has lesser or negligible dipole moments and hence it has low power of ionization and hence trans isomer are less acidic. Trans isomer less acidic due to strong forces of attraction in lattice and week forces of attraction towards action solvents. C C H COOH H C C H COOH HOOC H COOH Cis- malic acid Trans-Fumaric acid More acidic Less acidic R.C.P.KASEGAON
  • 53. 6. OpticalActivity: Depends upon plane symmetry Cis& Trans Isomerism differentiated. Example: Cis Hexahydrophthalic acid shows plane of symmetry and hence it optical inactive while trans Hexahydrophthalic acid does not shows plane of symmetry hence it is optically active COOH COOH H H Cis- hexahydrophthalic acid COOH H H COOH Trans- Hexhydrophthalic acid Internal Plane symmetry (Optical Inactive) No Internal Plane of symmetry (Optical Active) R.C.P.KASEGAON
  • 54. 7. Steric factor The trans isomers are more stable than the corresponding cis isomer because in cis isomer the bulky groups are on the same side of the double bond. The steric repulsion of the groups make the cis isomer least stable. R.C.P.KASEGAON
  • 55. B. chemical methods takes 1. Cyclization The formation of a cyclic molecule from an open chain molecule place easily only when the reacting groups are close to each other. This fact has been most useful in assigning configurationto cis- trans isomers in which the doubly bound carbon atoms carry groups that are capable of reacting with each other, The configuration of maleic and fumaric acids is established on this basis. Maleic acid readily forms cyclic anhydride whereas fumaric acid does not. This means that in maleic acid the two groups are nearer to each other than they are in fumaric acid. That is, obviously maleic acid is the cis form and fumaric acid the trans form. R.C.P.KASEGAON
  • 58. 2. Heat of Hydrogenation: CH2 C CH2 CH3 + H2 CH3 CH2 C CH3 H2 H =-127KJ mol-1 C C + H2 CH3 CH2 H2 C CH3 H =-120KJ mol-1 + H2 CH3 CH2 C H2 CH3 H =-115KJ mol-1 CH3 H H Cis C C H CH3 3 H C H Trans 1-Butene evolves the greatest amount of heat when hydrogenated, and trans-2-butene evolves the least. 1-Butene must have the greatest energy (enthalpy) and be the least stable isomer. Trans-2-Butene must have the lowest energy (enthalpy) and be the most stable isomer Pt Pt Pt butane but-1-ene H H3C The order of stability is trans-2-butene > cis-2-butene > 1-butene. R.C.P.KASEGAON
  • 59. Energy Profile Diagram of stability of Cis-trans Isomers of Butene R.C.P.KASEGAON
  • 60. 3. Formation of Oximes C O H3C + H2N OH -H2O C N (Z) H3C OH H (Z)-acetaldehyde oxime C H3C O + H2N OH -H2O C N (E) H3C OH H3C H2C (E)-butan-2-one oxime H acetaldehyde H3C CH2 butan-2-one Depend on the starting material used in oximes formation E& Z Nomenclature determined When acetaldehyde reacts with hydroxyl amine to form Z isomer When Butanone reacts with hydroxyl amine to form E isomer R.C.P.KASEGAON
  • 61. 4. Conversion into Known Configuration If Trichlorochrotonic acid coverted into fumaric acid with help of hydrolysis then it confirms that starting material was Trans Trichloro Chromtonic acid If Trichlorochrotonic acid Not coverted into fumaric acid with help of hydrolysis then it confirms that starting material was Cis Trichloro Chromtonic acid. From above Cis-Trans isomerism is determined on the basis of formation of fumaric acid. R.C.P.KASEGAON
  • 62. 4. Conversion into Known configuration C C COOH H 3 Cl C H 2H2O C C COOH HOOC H C C COOH H H3C H 3H2 Cis- Chrotonic acid Cis- Trichloro chrotonic acid C C COOH H H Cl3C C C COOH H H HOOC Tans-Fumaric acid C C COOH H H H3C 3H2 Trans- Chrotonic acid Trans-Trichloro chrotonic acid H Cis- Malic acid -3HCl 2H2O -3HCl -3HCl -3HCl R.C.P.KASEGAON
  • 63. Instrumental Technique: 1.X-ray Diffraction: Crystals of Trans isomers are easily identified because presence of crystal lattice while cis form does not contains crystal lattice 2.IR Spectroscopy:Trans isomer shows band at 970-960cm-1 while cis will not shows band at wave numbers 3.NMR Spectroscopy:Protons presentat both isomers having different coupling constant. Example: Trans Cinnamic acid has larger coupling constant than Cis Isomer C C (Z) H C H 6 5 H COOH Cis- Cinnamic acid J=12Hz H (E) C C C6H5 COOH H Trans- Cinnamic acid J=16Hz R.C.P.KASEGAON
  • 64. Conformational Isomerism • Conformational isomers are different shapes of the same molecule resulting from rotation around a single C-C bond. They are not different compounds (i.e. they have the same physical and chemical properties) and are readily interconvertible • Conformational isomerism is a form of stereoisomerism in which the isomers can be interconverted just by rotations about formally single bonds. R.C.P.KASEGAON
  • 65. Conformation: The different arrangements of atoms caused by rotation about a single bond are called conformations. Conformer: A conformer (or conformational isomer) is a compound with a particular conformation. Conformational isomers can be represented by Sawhorse representations or Newman projections. R.C.P.KASEGAON
  • 66. Conformations of Ethane (CH3-CH3) Rotation around the C-C bond produces two distinctive conformations. 1. Eclipsed Conformation: C-H bonds on each carbon atom are as close as possible. R.C.P.KASEGAON
  • 67. 2. Staggered conformation: C-H bonds on each carbon atom are as far apart as possible. R.C.P.KASEGAON
  • 68. Torsion Angle/Dihedral angle: The angle Between Front and Back hydrogen is called as torsion angle and easily seen in Newman Projection In Eclipsed confirmation dihedral angle is 0° and due to steric repulsion torsion energy is higher in eclipsed and that makes less stable In staggered confirmation atoms are far away and dihedral angle is more i,e 60° and hence steric repulsion is low and less torsion energy and that makes more stable R.C.P.KASEGAON
  • 70. Torsional Strain Torsional strain or eclipsing strain is the increase in potential energy of a molecule due to repulsion between electrons in bonds that do not share an atom. Consider two conformations of ethane: The smallest dihedral angle is 60º in 1; it is 0º in 2. Thus, two C-H bonds not sharing a carbon atom that are closest to each other (ex: C-H1 and C-H4) are closer in 2 than in 1. The repulsion between electrons greater in 2 than in 1. Consequently, torsional strain is greater in 2 than in 1. R.C.P.KASEGAON
  • 71. Steric Strain Steric strain is the increase in potential energy of a molecule due to repulsion between electrons in atoms that are not directly bonded to each other. Consider two staggered conformations of 1,2-dibromoethane: In 1, the Br atoms are closer to each other than they are in 2 (in 1, the dihedral angle between the bromine atoms is 60º; in 2, it is 180º). Thus, the repulsion between electrons in one bromine atom and those in the other is greater in 1 than in 2. Thus, steric strain is greater in 1 than in 2. (Since the Br atoms are pointing in opposite directions in 2, there is no steric strain in 2 due to interaction between the Br atoms.) R.C.P.KASEGAON
  • 72. Energy Profile Diagram of conformation of ethane R.C.P.KASEGAON
  • 73. The staggered conformation is more stable as the C-H bonds are further apart. The energy difference between them (12 kJmol−1) is known as the torsional strain. This energy difference is relatively small, and hence there is free rotation about the C-C bond at room temperature. The angle between the front and back hydrogen is dihedral (or torsional) angle. R.C.P.KASEGAON
  • 74. Conformations of butane (CH3CH2CH2CH3) In butane, the staggered conformations do not all have the same energy. 1.Eclipsed Conformation: Two Methyl Groups are closer together and high steric energy and this conformation is least stable(4.6Kcal) 2.The gauche (or synclinal): Two methyl groups are near one another (60° separation), resulting in steric between two groups, whichare strain. Steric strain is the repulsive interaction closer to one another than their atomic radii allow. Gauche conformation has 0.9 Kcal energy. More stable than eclipsed conformation 3.The anti- (or antiperiplanar or staggered ) conformation is the most stable as the two methyl groups are as far apart as possible (180° separation). Energy is 0 Kcal R.C.P.KASEGAON
  • 75. Energy Profile Diagram of n- Butane R.C.P.KASEGAON
  • 76. Conformation Analysis of n-Butane A) Eclipsed Conformation 1. Syn- periplanar: Dihedral angle 0°(4.6 Kcal) 2. anti-Clinical: Dihedral Angle 120°(3.6Kcal) B) Staggered Conformation 1. Gauche(Syn- Clinical): Dihedral angle 60°(0.9Kcal) 2. Anti- Periplanar: Dihedral Angle 180°(0Kcal) Energy rank order: Syn-Periplanar> anti-clinical>Gauche(Syn-clinical>Anti-periplanar) Stability Rank Order: Anti-periplanar>Gauche>anti-clinical>>syn-periplanar R.C.P.KASEGAON
  • 77. The most stable conformation for a straight-chain alkane is a zigzag shape, as the alkyl groups are as far apart as possible. (This is why we draw alkyl chains with a zigzag structure.) It should be noted that when the methyl groups in butane are eclipsed and are in the same plane (0° separation), this is known as the syn- periplanar conformation.) R.C.P.KASEGAON
  • 78. Conformations of cycloalkanes The shape of cycloalkanes is determined by torsional strain,steric strain and angle strain. Angle strain: For an sp3 hybridized carbon atom, the ideal bond angle is 109.5° (tetrahedral). Angle strain is the extra energy that a compound has because of non-ideal bond angles (i.e. angles above or below 109.5°) e.g. Cyclopropane. Due to the rigidity of the cyclopropane ring it could assume only one conformation, namely the planar conformation. R.C.P.KASEGAON
  • 80. rings are Cyclopentane (5-membered) and cyclohexane (6-membered) therefore the most stable and, consequently, the most easily formed. Cycloalkanes can adopt different conformations (or shapes): Cyclopropane is flat, cyclobutane can form a butterfly shape, while cyclopentane can form an open-envelope shape. R.C.P.KASEGAON
  • 81. Cyclopropane has to be planar and therefore has very strained bond angles of 60° and a great deal of torsional energy. However, cyclobutane and cyclopentane can adopt non-planar (puckered) shapes which decrease the torsional strain by staggering the C-H bonds. However, this is at the expense of angle strain, and the butterfly and open-envelope shapes represent the best compromise between the two opposing effects. R.C.P.KASEGAON
  • 82. Cyclohexane • Cyclohexane adopts the chair or boat conformations, which are both free of angle strain. However, the boat conformation is less stable because of steric strain between the C-1 and C-4 hydrogen's. • All carbons are sp3 hybridized and creates 109° bond angle • The two chair forms can interconvert via the boat form in a process known as ring-flipping. R.C.P.KASEGAON
  • 83. Chair Conformation of Cyclohexane: 1.Chair Conformation of cyclohexane contains 12 hydrogen's Cyclohexane 2. Six hydrogen's are in axial and remaining Six hydrogen's are in equatorial H H H H H H Axial hydrogens H H H H H H equatorial hydrogens H H H H H H H H H H H H Axial & Equatorial 1 2 4 3 5 6 R.C.P.KASEGAON
  • 84. Boat Conformation of Cyclohexane: 1.Boat Conformation of cyclohexane contains 12 hydrogen's 2. Six hydrogen's are in axial and remaining Six hydrogen's are in equatorial 3. Hydrogen's at C1 and C4 are close together and creates steric strain, Hence boat form is less stable H H H H H H H H H H H H H H H H H H H H H H H H 1 2 Boat 3 4 5 6 R.C.P.KASEGAON
  • 86. The chair conformation has six axial and six equatorial hydrogens. On ring-flipping, the axial hydrogens become equatorial and the equatorial hydrogens become axial. R.C.P.KASEGAON
  • 87. Energy profile Diagram of Cyclohexane R.C.P.KASEGAON
  • 88. Conformational Analysis of Cyclohexane chair half chair 12.1 kcal/mole twist boat form 5.3 kcal/mole boat f o r m 6.8 kcal/mole Chair form is highly stable conformation Half chair form is highly unstable conformation Twisted boat form is more than boat and half chair form but less stable than chair form Boat form is more stable than half chair form but less stable than chair and twisted boat form R.C.P.KASEGAON
  • 89. If a substituent (X) is present, then this prefers to sit in an equatorial position. The equatorial conformer is lower in energy because steric strain (or 1,3-diaxial interactions) raises the energy of the axial conformer. As the size of the X group increases, so does the proportion of the equatorial conformer at equilibrium. R.C.P.KASEGAON
  • 90. For disubstituted cyclohexanes, both groups should sit in an equatorial position. When this is not possible, then the largest group (e.g. a t-Bu group rather than a Me group) will sit in the equatorial position. R.C.P.KASEGAON
  • 91. When the two substituents on the ring are both pointing up (or both pointing down), these cyclic compounds are designated cis stereoisomers. When one substituent is pointing up and the other down, these cyclic compounds are designated trans-stereoisomers R.C.P.KASEGAON
  • 92. Stereo specific Reaction and Stereo selective reaction Stereo selective reaction: Any reaction in which only one set of stereo isomers is formed exclusively from all possible isomer and does not depends upon stereochemistry of starting material Stereo Specific Reaction: The reaction in which stereochemistry of product is determined by stereochemistry of starting material. Comments: All stereo selective reactions are stero specific R.C.P.KASEGAON
  • 93. Stereo specific reaction: C H C H CH3 H3C C C CH3 H3C Reaction of bromine with 2-butene to form 2,3 dibromo butane 2,3 dibromo butane has 2 chiral centre hence creates 4 isomer, 2 are enantiomer and 2 are mesomer. H H Br2 Br Br 2,3-dibromobutane but-2-ene R.C.P.KASEGAON
  • 94. Stereo specific reaction: Cis-2 butene produces only a pair of enantiomer as a racemic mixture, there is no formation of mesomer, A reaction which produce only one set of isomer stereo isomer are called stereo selective reaction This reaction is stereo specific because Enantiomer formation requires Cis 2-butene which is stereo isomer.(Stereochemistry of product depends on stereochemistry of starting material) C C H 3 C H Br2 C C H 3 Br H C C C H 3 C H 3 H B r Br H + H 3 C H Cis-2 Butene Br C H CH3 2,3-dibromobutane (2S,3S) 2,3-dibromobutane (2R,3R) R.C.P.KASEGAON
  • 95. Stereo specific reaction: Trans – Butene produce set of mesomer not enantiomer This reaction also stereo selective reaction because only one set isomer produced exclusively. This reaction is stereo specific because mesomer formation requires trans 2-butene which is stereo isomer. C C H H3 C Br2 C CH3 Br H C C CH3 C H 3 H H Br Br + H CH3 Trans-2 Butene H C Br CH3 2,3-dibromobutane (Meso) 2,3-dibromobutane (Meso) R.C.P.KASEGAON
  • 97. Stereo specific reaction: Mechanism Step-1 formation of Cis-brominium ion Step-2 Attack of bromide to bromine intermediate It have 2 possible pathway If attack follows pathway a then structure A is Produced if attack follows pathway b the structure B is produced. Product formation depends upon pathway followed by substrate is called stereo specific R.C.P.KASEGAON
  • 98. Stereo specific reaction: Mechanism C C (E) H CH3 H3C H Br-Br C C H CH3 H3C H Br Br c d a b C C C C H CH3 3 H C Br H CH3 Br H3C H Br C Br H D Anti Addition of Bromine Substrate is Trans-2- Butene (S) Br H (R) Br H CH3 (R) CH3 H Br (S) H Br Meso CH3 Meso R.C.P.KASEGAON
  • 99. Stereo specific reaction: Mechanism Step-1 formation of Trans-brominium ion Step-2 Attack of bromide to bromine intermediate It have 2 possible pathway If attack follows pathway c then structure C is Produced if attack follows pathway d the structure D is produced. Only One set of isomer produced hence follows hence is stereo selective reaction and set of isomer formation depends on stereo chemistry of substrate mean meso compounds reqiures trans substrate. Hence bromination 2- butene is stereo specific and stereo selective reaction R.C.P.KASEGAON
  • 100. Stereo Selective reaction: Formation of one set of isomer but it does not depends on stereo chemistry of substrate Epoxidation of alkene by H2O2  Only trans epoxide is formed hence it stereo selective Product not depends on stereo chemistry substrate means Cis or Trans isomer gives only trans epoxide R.C.P.KASEGAON
  • 101. (Z) S O H H (E) S O H H (S) S O (S) H H O (S) (S) S O H H O Trans- Epoxide Trans Epoxide Cis Trans R.C.P.KASEGAON
  • 102. Atropisomerism Biphenyls are compounds whereby a phenyl ring is connected to another through a central σ bond. In unsubstituted biphenyl, there is sufficient amount of freedom of rotation around the central single bond to allow for free interconversion between the various conformers or rotamers so that the various rotamers cannot exist independently. R.C.P.KASEGAON
  • 103. Atropisomerism Biphenyls with large substituent's at the ortho positions on either side of the central σ bond experience restricted rotation along this bond due to steric hindrance. If the substituent's are different, a chiral molecule existing as a pair of enantiomers called atropisomers . Polynuclear aromatic systems such as binol also exist as enantiomers. OH HO OH HO Mirror Specific rotation=+35.5 Specific rotation=-35.5 R.C.P.KASEGAON
  • 104. Atropisomerism Atropisomerism are stereo isomers as a result of restricted rotation about a single bond. Atropisomers are stereoisomer's resulting from hindered rotation about single bonds where the steric strain barrier to rotation is high enough to allow for the isolation of the conformers (from Greek, a = not and tropos = turn). If bulky group on ortho position of bi-phenyl or strained ring structural features. Bulky substituent's or strained rings may enhance the barrier to rotation between two distinct conformations to such an extent as to allow observation of atropisomers . Atropisomerism is also called axial chirality and the chirality is not simply a centre or a plane but an axis. R.C.P.KASEGAON
  • 105. Atropisomerism Symmetrical-Achiral (R) O2N NO2 (S) NO2 COOH NO2 COOH COOH HOOC R- 6,6 dinitroph enyl-2,2 dicarbox ylic acid S- 6,6 dinitrophenyl-2,2 dicarboxylic acid C-C- Sigma Bond or pivotal bond Biphenyl substituted on ortho position, which contains a chiral axis along the biphenyl linkage. The biphenyl rings are perpendicular to each other in order to minimize steric clashes between the four ortho substituent's meaning that rotation about the biphenyl bond through pivotal bond is restricted R.C.P.KASEGAON
  • 106. Conditions of Atropisomerism A rotationally stable axis . Presence of different substituent's on both sides of the axis. The configuration stability of axially chiral biaryl compounds is mainly determined by three following factors 1.The combined steric demand of the substituent in the combined steric demand of the substituent's in the proximity of the axis 2.The existence, length and rigidity of bridges. 3.Atropisomerisation mechanism different from a merely physical rotation about the axis, e.g. photo chemically or chemically induced processes R.C.P.KASEGAON
  • 107. Conditions for Optical Activity Four different substituent's should be attached Non Super mirror Image of each other Non symmetrical nature means absence Plane/Centre/Axis symmetry. Substituted Biphenyl compound satisfies all above criteria hence Substituted biphenyls are optically active compound R.C.P.KASEGAON