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Measuring Evolution of Populations SLIDE SHOW MODIFIED FROM KIM FOGLIA@explorebiology.com
5 Agents of evolutionary change Mutation Gene Flow Genetic Drift Selection Non-random mating
Populations & gene pools ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Evolution of populations ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Hardy-Weinberg equilibrium ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],W. Weinberg physician G.H. Hardy mathematician
Hardy-Weinberg theorem ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],bb Bb BB
Hardy-Weinberg theorem ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],bb Bb BB
H-W formulas ,[object Object],[object Object],[object Object],[object Object],bb Bb BB B  b B  BB  Bb b  Bb  bb  BB B b Bb bb
Using Hardy-Weinberg equation What are the genotype frequencies? q 2  (bb): 16/100 = .16 q  (b): √.16 =  0.4 p  (B): 1 - 0.4 =  0.6 population:  100 cats 84 black, 16 white How many of each genotype? bb Bb BB p 2 =.36 2pq =.48 q 2 =.16 Must assume population is in H-W equilibrium!
Using Hardy-Weinberg equation bb Bb BB p 2 =.36 2pq =.48 q 2 =.16 Assuming  H-W equilibrium Sampled data  p 2 =.74 2pq =.10 q 2 =.16 How do you explain the data?  p 2 =.20 2pq =.64 q 2 =.16 How do you explain the data?  Null hypothesis  bb Bb BB
Application of H-W principle ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Sickle cell frequency ,[object Object],[object Object],[object Object],[object Object],[object Object],Why is the H s  allele maintained at such high levels in African populations? Suggests some selective advantage of being heterozygous…
Malaria  Single-celled eukaryote parasite ( Plasmodium ) spends part of its life cycle in red blood cells 1 2 3
Heterozygote Advantage ,[object Object],[object Object],[object Object],[object Object],[object Object],Hypothesis : In malaria-infected cells, the O 2  level is lowered enough to cause sickling which kills the cell & destroys the parasite. Frequency of sickle cell allele & distribution of malaria
HARDY-WEINBERG  PRACTICE PROBLEMS p + q = 1 p 2  +  2 pq  + q 2  = 1
[object Object],Bb and BB pigs “look alike”  so can’t tell their alleles by observing their phenotype. ALWAYS START WITH RECESSIVE alleles. p= dominant allele  q = recessive allele 4/16 are black. So bb  or  q 2  = 4/16 or 0.25 q =  0.25  = 0.5
[object Object],[object Object],[object Object],p + q = 1 p + 0.5 = 1 p = 0.5 Now you know the  allele  frequencies. The frequency of the recessive (b) allele  q = 0.5 The frequency of the dominant (B) allele  p = 0.5 http://www.phschool.com/science/biology_place/labbench/lab8/samprob1.html
WHAT ARE THE    GENOTYPIC  FREQUENCIES? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],http://www.phschool.com/science/biology_place/labbench/lab8/samprob1.html
Within a population of butterflies, the color brown (B) is dominant over the color white (b). And, 40% of all butterflies are white.  Image from: BIOLOGY by Miller and Levine; Prentice Hall Publishing ©2006 q 2  = 0.4  q =  0.4  = 0.6324 p = 1 -  0.6324 = 0.3676 aa = 0.4  =  40%  Aa = 2 (0.632) (0.368) = 0.465 =46.5% AA = (0.3676) (0.3676) = .135 = 13.5%
PRACTICE HARDY WEINBERG 1 in 1700 US Caucasian newborns have cystic fibrosis. C for normal is dominant over c for cystic fibrosis.  Calculate the allele frequencies for   C and c in the population Image from: BIOLOGY by Miller and Levine; Prentice Hall Publishing ©2006
1/1700 have cystic fibrosis q 2  = 1/1700  q =  0.00059 q = 0.024  p = 1 – 0.024 = 0.976 Frequency of C = 97.6% Frequency of c = 2.4% NOW FIND THE GENOTYPIC FREQUENCIES
CC or p 2  = (0.976) 2  =  .953  Cc  or  2pq = 2 (0.976) (0.024) = 0.0468 cc = 1/1700 = 0.00059 CC = 95.3% of population Cc = 4.68% of population cc = .06% of population
Now you can answer questions about the population: How many people in this population are heterozygous? It has been found that a carrier is better able to survive diseases with severe diarrhea. What would happen to the frequency of the "c" if there was a epidemic of cholera or other type of diarrhea producing disease? 0.0468 (1700) = 79.5 ~ 80 people are Cc Cc more likely to survive than CC. c will increase in population
The gene for albinism is known to be a recessive allele.  In Michigan, 9 people in a sample of 10,000 were found to have albino phenotypes. The other 9,991 had skin pigmentation normal for their ethnic group.  Assuming hardy-Weinberg equilibrium, what is the allele frequency for the dominant pigmentation allele in this population? q 2  = 9/10000 q =  0.0009  q = 0.03  p = 1 – 0.03= 0.97 Frequency of C = 97% Frequency of c = 3%
CC or q 2  = (0.976) 2  =  .953  Cc  or  2pq = 2 (0.976) (0.024) = 0.0468 cc = 1/1700 = 0.00059 CC = 95.3% of population Cc = 4.68% of population cc = .06% of population

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Hardyweinberg

  • 1. Measuring Evolution of Populations SLIDE SHOW MODIFIED FROM KIM FOGLIA@explorebiology.com
  • 2. 5 Agents of evolutionary change Mutation Gene Flow Genetic Drift Selection Non-random mating
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  • 9. Using Hardy-Weinberg equation What are the genotype frequencies? q 2 (bb): 16/100 = .16 q (b): √.16 = 0.4 p (B): 1 - 0.4 = 0.6 population: 100 cats 84 black, 16 white How many of each genotype? bb Bb BB p 2 =.36 2pq =.48 q 2 =.16 Must assume population is in H-W equilibrium!
  • 10. Using Hardy-Weinberg equation bb Bb BB p 2 =.36 2pq =.48 q 2 =.16 Assuming H-W equilibrium Sampled data p 2 =.74 2pq =.10 q 2 =.16 How do you explain the data? p 2 =.20 2pq =.64 q 2 =.16 How do you explain the data? Null hypothesis bb Bb BB
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  • 13. Malaria Single-celled eukaryote parasite ( Plasmodium ) spends part of its life cycle in red blood cells 1 2 3
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  • 15. HARDY-WEINBERG PRACTICE PROBLEMS p + q = 1 p 2 + 2 pq + q 2 = 1
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  • 19. Within a population of butterflies, the color brown (B) is dominant over the color white (b). And, 40% of all butterflies are white. Image from: BIOLOGY by Miller and Levine; Prentice Hall Publishing ©2006 q 2 = 0.4 q = 0.4 = 0.6324 p = 1 - 0.6324 = 0.3676 aa = 0.4 = 40% Aa = 2 (0.632) (0.368) = 0.465 =46.5% AA = (0.3676) (0.3676) = .135 = 13.5%
  • 20. PRACTICE HARDY WEINBERG 1 in 1700 US Caucasian newborns have cystic fibrosis. C for normal is dominant over c for cystic fibrosis. Calculate the allele frequencies for C and c in the population Image from: BIOLOGY by Miller and Levine; Prentice Hall Publishing ©2006
  • 21. 1/1700 have cystic fibrosis q 2 = 1/1700 q = 0.00059 q = 0.024 p = 1 – 0.024 = 0.976 Frequency of C = 97.6% Frequency of c = 2.4% NOW FIND THE GENOTYPIC FREQUENCIES
  • 22. CC or p 2 = (0.976) 2 = .953 Cc or 2pq = 2 (0.976) (0.024) = 0.0468 cc = 1/1700 = 0.00059 CC = 95.3% of population Cc = 4.68% of population cc = .06% of population
  • 23. Now you can answer questions about the population: How many people in this population are heterozygous? It has been found that a carrier is better able to survive diseases with severe diarrhea. What would happen to the frequency of the "c" if there was a epidemic of cholera or other type of diarrhea producing disease? 0.0468 (1700) = 79.5 ~ 80 people are Cc Cc more likely to survive than CC. c will increase in population
  • 24. The gene for albinism is known to be a recessive allele. In Michigan, 9 people in a sample of 10,000 were found to have albino phenotypes. The other 9,991 had skin pigmentation normal for their ethnic group. Assuming hardy-Weinberg equilibrium, what is the allele frequency for the dominant pigmentation allele in this population? q 2 = 9/10000 q = 0.0009 q = 0.03 p = 1 – 0.03= 0.97 Frequency of C = 97% Frequency of c = 3%
  • 25. CC or q 2 = (0.976) 2 = .953 Cc or 2pq = 2 (0.976) (0.024) = 0.0468 cc = 1/1700 = 0.00059 CC = 95.3% of population Cc = 4.68% of population cc = .06% of population

Notas del editor

  1. G.H. Hardy (the English mathematician) and W. Weinberg (the German physician) independently worked out the mathematical basis of population genetics in 1908. Their formula predicts the expected genotype frequencies using the allele frequencies in a diploid Mendelian population. They were concerned with questions like "what happens to the frequencies of alleles in a population over time?" and "would you expect to see alleles disappear or become more frequent over time?"
  2. Sampled data 1: Hybrids are in some way weaker. Immigration in from an external population that is predomiantly homozygous B Non-random mating... white cats tend to mate with white cats and black cats tend to mate with black cats. Sampled data 2: Heterozygote advantage. What’s preventing this population from being in equilibrium.
  3. Sickle Cell: In tropical Africa, where malaria is common, the sickle-cell allele is both an advantage & disadvantage. Reduces infection by malaria parasite. Cystic fibrosis: Cystic fibrosis carriers are thought to be more resistant to cholera: 1:25, or 4% of Caucasians are carriers Cc