R Markdown, Rpubs & github publishing and Shiny by Example
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Step by Step guide on how to publish RMarkdown (R code) to Rpubs website and github. Shiny applications are also included
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R Markdown, Rpubs & github publishing and Shiny by Example
- 1. R Markdown, Rpubs & github publishing and Shiny by example Vincent Claes
- 2. New R Markdown document Vincent Claes
- 3. Title and Author – HTML Document Vincent Claes
- 4. Knit to HTML Vincent Claes Save document first!
- 5. Knit to HTML Vincent Claes
- 6. Rmd code analytics Vincent Claes
- 7. • http://www.rstudio.com/wp-content/uploads/2015/03/rmarkdown- reference.pdf • http://www.rstudio.com/wp-content/uploads/2016/03/rmarkdown- cheatsheet-2.0.pdf Rmd Syntax Vincent Claes
- 8. # Header 1 ## Header 2 ### Header 3 #### Header 4 ##### Header 5 ###### Header 6 Rmd Headers Vincent Claes
- 9. plain text plain text *italics* italics **bold** bold Rmd text syntax Vincent Claes
- 10. Rmd text syntax Vincent Claes To put text on next line in html: 2 spaces after text in Rmd file
- 11. R code chunks Vincent Claes
- 12. R code chunk options Vincent Claes
- 13. R code chunk options Vincent Claes
- 14. R code chunk options Vincent Claes
- 15. Online publishing Vincent Claes • Rpubs • http://rpubs.com/ • Create an account, it’s free. • Github • Read about git: https://git-scm.com/book/en/v2/Getting-Started-Git-Basics • https://github.com/ • Create a free account • Git installed => download from https://git-scm.com/download/win • Restart Rstudio after git installation
- 16. Online publishing to Rpubs Vincent Claes
- 17. Online publishing to Rpubs Vincent Claes
- 18. Online publishing to Rpubs Vincent Claes
- 19. Online publishing to Rpubs Vincent Claes
- 20. Online publishing to Rpubs Vincent Claes
- 21. Online publishing to Rpubs Vincent Claes • http://rpubs.com/cteq/Example01
- 22. Online publishing to Rpubs Vincent Claes • http://rpubs.com/cteq/Example02 • Other html widgets: • http://www.htmlwidgets.org/
- 23. Online publishing to github Vincent Claes • Create new repo on github
- 24. Online publishing to github Vincent Claes • Create new repo on github
- 25. Online publishing to github Vincent Claes • New project => Version Control => git
- 26. Online publishing to github Vincent Claes • New project
- 27. Online publishing to github Vincent Claes
- 28. • Copy/Paste Example02.Rmd to this project directory Online publishing to github Vincent Claes
- 29. • Changes files to [A] (means Added) and hit push Online publishing to github Vincent Claes
- 30. • Changes files to [A] (means Added) and hit push Online publishing to github Vincent Claes
- 31. • Changes files to [A] (means Added) and hit push Online publishing to github Vincent Claes
- 32. • Commit changes Online publishing to github Vincent Claes
- 33. • Commit changes Online publishing to github Vincent Claes
- 34. • Commit changes Online publishing to github Vincent Claes
- 35. • Commit changes Online publishing to github Vincent Claes
- 36. • In Rstudio make a new directory “gh-pages” • Move your files into this directory Online publishing to github Vincent Claes
- 37. • In Rstudio make a new branch “gh-pages” • Push /commit the files to this new branch and check them on github.com website • Knit to html your Example02.Rmd file Online publishing to github Vincent Claes
- 38. • Knit Rmd to html and push / commit Online publishing to github Vincent Claes
- 39. • When your url is: https://github.com/pxltech/SmartSystems/tree/gh- pages/gh-pages change it to https://pxltech.github.io/SmartSystems/gh-pages/Example02.html Online publishing to github Vincent Claes
- 40. • Generating slides • Generating pdf files • Generating WORD documents Rmarkdown: some other features Vincent Claes
- 41. • File => new project => New Directory => Shiny Web Application Shiny Applications in R Vincent Claes
- 42. • Create git repository Shiny Applications in R Vincent Claes
- 43. Shiny Applications in R Vincent Claes
- 44. Shiny Applications in R Vincent Claes
- 45. Shiny Applications in R [app.R] Vincent Claes
- 46. Shiny Applications in R Publish application Vincent Claes • http://www.shinyapps.io create a free account • Publish your application to shinyapps.io website
- 47. Shiny Applications in R Publish application Vincent Claes
- 48. Shiny Applications in R Publish application Vincent Claes • Other Example:
- 49. Shiny Applications in R Publish application Vincent Claes
- 50. Shiny Applications in R Publish application Vincent Claes • Happy Coding! • vincent.claes[at]pxl.be