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CELL STRUCTURE
AND
FUNCTION OF ORGANELLES
IN THIS TOPIC
 Structure and functions :
 Cell wall
 Cell membrane
 Organelles
 Movement of molecules/substances
in and out of the cell
CELL WALL
 Outside the cell membrane
 In plant cell, prokaryotes, some protista and
fungi only.
 Components :
 middle lamella
 primary wall
 secondary wall
 Plasmodesmata
 Land plants :
 Cellulose
 Lignin
 Suberin
 Waxy
 Waterproof (some tissue)
 Functions :
 Cell shape
 Support and mechanical strength
 Prevent haemolysis
 „skin‟
 Carbohydrate store
CELL MEMBRANE
 Both in animal and plant cell
 Selective permeable
 Composed of :
 Proteins
 Glycoprotein
 Glycolipids
 Phospholipid
 Cholesterol and lipoprotein (a few)
 Fluid mosaic model
 Lipid bilayer
 Phospholipid
 Hydrophilic head (polar)
 Hydrophobic tail (non-polar)
 Embedded protein
 Embedded between layer
 Integral protein
 Peripheral protein (not embedded)
 Free movement within layer
 As carrier and channel protein
 Cholesterol
 Make phospholipid stay in position
 ‘Fluid’
 protein and lipid molecules able to shift and move laterally
 ‘Mosaic’
 the protein molecules form mosaic-like patterns when viewed from
the top.
 Functions of cell membrane
 Barrier
 Maintain internal environment of cell
 Communication between cell
 Markers to foreign materials
 Transportation
(Text book page 29)
ORGANELLES
1. Nucleus
2. Endoplasmic reticulum
3. Golgi apparatus
4. Mitochondria
5. Lysosomes
6. Ribosomes
7. Chloroplasts
8. Centrioles
9. Vesicles
Nucleus
Nucleus
 ‘The Control Centre’
 Available in all eukaryotes excepts ;
 Sieve tube of phloem
 R_ _ _ _ oo _ _ _ l l
Components of nucleus
nuclear envelope
nucleoplasm
nucleolus
chromatin
Nuclear envelope
 Two outer membranes (lipid bilayers)
 Innermost surface has DNA attachment sites
Nuclear pore bilayer facing cytoplasm Nuclear envelope
bilayer facing
nucleoplasm
Nucleolus
 dark spot
 in the middle of the nucleus
 produce ribosomes
Functions :
 Store genetics material and information
 Site of cell division
 Produce RNA & DNA
Endoplasmic reticulum
 In animal cells, continuous with nuclear
membrane
 Extends throughout cytoplasm
 Two regions - rough and smooth
Rough ER Smooth ER
 Functions
ROUGH ER SMOOTH ER
Prominent in cells that manufacture
protein for export ; digestive
enzymes, hormones, structural
protein or antibodies
Necessary for steroid synthesis,
metabolism and detoxification of
substances in liver, phospholipid
synthesis and excitation-
contraction coupling in skeletal
muscle
With ribosome Without ribosome
Golgi body
 Puts finishing touches on proteins and
lipids that arrive from ER
 Packages finished material for shipment
to final destinations
 Material arrives and leaves in vesicles
Mitochondria
ATP-producing
powerhouses
(aerobic respiration)
Membranes form
two distinct
compartments
ATP-making
machinery
embedded in inner
mitochondrial
membrane
outer
compartment
inner
compartment
outer membrane inner membrane
repeated foldings
of inner membrane
(cristae)
Lysosomes
 a vesicle
 with enzymes
 digest biological macromolecules
 ER to Golgi body
 Autophagy
 Autolysis
Ribosomes
 Function as the site of mRNA translation
during protein synthesis
 Free-wheeling in cytoplasm / attached to ER
 TWO subunits ; small and large
Chloroplasts
 Site of photosynthesis
Centrioles
 Type of cytoskeleton (network of fiber)
 In mitosis; source of mitotic spindle
 Functions ;
 Organise the formation of spindle fiber
 Organise the formation of cilia and flagella (9+2 /
9+3)
vesicles
 a sac
 In cytoplasm
 Types ;
 Lysosome
 Peroxisome
 Shuttle vesicles
 Secretory vesicles
 Endocytosis vesicles
 Storage vesicles
♫ ♪ Take 5 ♫ ♪
MOVEMENT OF
MOLECULES/SUBSTANCES
IN AND OUT OF THE CELL
 The movement of molecules are based on
concentration gradient
 Concentration gradient ;
 Means the number of molecules or ions in one
region is different than the number in another
region
 In the absence of other forces, a substance
moves from a region where it is more
concentrated to one where it‟s less
concentrated - “down” gradient
Passive transport
Active transport
Endocytosis
Exocytosis
PASSIVE TRANSPORT
 Does not require ATP
 High to low of concentration gradient
 Types ;
 Diffusion
 Osmosis
 Facilitated diffusion
Diffusion
 movement of molecules or ions down a
concentration gradient
 the molecules move using a natural
kinetic energy
what determines the rate of diffusion?
Steepness of concentration gradient
◦ Steeper gradient, faster diffusion
Molecular size
◦ Smaller molecules, faster diffusion
Temperature
◦ Higher temperature, faster diffusion
Surface area
◦ Higher surface area, faster diffusion
Molecules that diffuse through cell membranes
Oxygen – Non-polar so
diffuses very quickly.
Carbon dioxide – Polar
but very small so
diffuses quickly.
Water – Polar but also
very small so diffuses
quickly.
Simple Diffusion
small, nonpolar molecules
(ex. O2, CO2)
Polar molecules
(ex. Glucose, water)
ions
(ex. H+, Na+, K+)
LIPID-SOLUBLE WATER-SOLUBLE
LIPID-SOLUBLE
Facilitated diffusion
 movement of molecules or ions
 down a concentration gradient
 with the help of transport protein
 Types of transport protein ;
 Carrier protein
 Channel protein
glucose transporter
solute (glucose)
low
[ conc‟n] of
glucose outside
cell > inside
Glucose
binds
Protein change
shapeGlucose is exposed to fluid on the
other side of the membrane,
detaches, leaves channel
Osmosis
 Water movement
 across a partially permeable membrane
 from an area of high water potential (low
solute concentration) to an area of low
water potential (high solute
concentration)
Hypotonic
Solution
membrane permeable to
water but not to solutes
Hypertonic
Solution
Tonicity 2% sucrose
solution
distilled water
10%
sucrose
solution
2%
sucrose
solution
Hypotonic
Conditions
Hypertonic
Conditions
Isotonic
Conditions
Isotonic solution Hypotonic solution Hypertonic solution
H2O H2O
(1) Normal (2) Lysed
H2O
H2O H2O H2O
Animal
cell
Plant
cell
(4) Flaccid (5) Turgid (6) Shriveled
(plasmolyzed)
(3) Shriveled
Plasma
membrane
H2O
H2O
ACTIVE TRANSPORT
 Transport of molecule
 Low to high of concentration gradient
 require ATP
 Involves carrier protein
ATP
ADP
Pi
higher calcium
concentration
lower calcium concentration
Calcium
enter
tunnel
Calcium
pump
ATP
transfer a
phosphate
group
Shape
change –Ca
release
Shape
returns o its
resting
position
ENDOCYTOSIS
 Transport of macromolecules
 Involves formation of vesicle
 Into the cell
 Two types;
 Phagocytosis
 Pinocytosis
phagocytic
vesicle
edible
bacterium
amoeba
Phagocytosis
 Phagocytosis; “cellular eating”.
 In phagocytosis, the cell engulfs a particle by
extending pseudopodia around it and
packaging it in a large vacuole.
 The contents of the vacuole are digested
when the vacuole fuses with a lysosome.
 In pinocytosis; “cellular drinking”
 a cell creates a vesicle around a droplet of
extracellular fluid.
EXOCYTOSIS
 Transport of molecules
 Out of a cell
 Enclosed in vesicle
 Move to cell surface membrane
 Fuse
 release
Both diffusion and facilitated diffusion are forms of passive transport of molecules
down their concentration gradient, while active transport requires an investment of
energy to move molecules against their concentration gradient.
Sekian
&
terima kasih

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Biology Lecture Slide Week 2

  • 2. IN THIS TOPIC  Structure and functions :  Cell wall  Cell membrane  Organelles  Movement of molecules/substances in and out of the cell
  • 4.  Outside the cell membrane  In plant cell, prokaryotes, some protista and fungi only.  Components :  middle lamella  primary wall  secondary wall  Plasmodesmata
  • 5.  Land plants :  Cellulose  Lignin  Suberin  Waxy  Waterproof (some tissue)  Functions :  Cell shape  Support and mechanical strength  Prevent haemolysis  „skin‟  Carbohydrate store
  • 7.  Both in animal and plant cell  Selective permeable  Composed of :  Proteins  Glycoprotein  Glycolipids  Phospholipid  Cholesterol and lipoprotein (a few)
  • 8.  Fluid mosaic model  Lipid bilayer  Phospholipid  Hydrophilic head (polar)  Hydrophobic tail (non-polar)  Embedded protein  Embedded between layer  Integral protein  Peripheral protein (not embedded)  Free movement within layer  As carrier and channel protein  Cholesterol  Make phospholipid stay in position  ‘Fluid’  protein and lipid molecules able to shift and move laterally  ‘Mosaic’  the protein molecules form mosaic-like patterns when viewed from the top.
  • 9.
  • 10.  Functions of cell membrane  Barrier  Maintain internal environment of cell  Communication between cell  Markers to foreign materials  Transportation (Text book page 29)
  • 12. 1. Nucleus 2. Endoplasmic reticulum 3. Golgi apparatus 4. Mitochondria 5. Lysosomes 6. Ribosomes 7. Chloroplasts 8. Centrioles 9. Vesicles
  • 14. Nucleus  ‘The Control Centre’  Available in all eukaryotes excepts ;  Sieve tube of phloem  R_ _ _ _ oo _ _ _ l l
  • 15. Components of nucleus nuclear envelope nucleoplasm nucleolus chromatin
  • 16. Nuclear envelope  Two outer membranes (lipid bilayers)  Innermost surface has DNA attachment sites Nuclear pore bilayer facing cytoplasm Nuclear envelope bilayer facing nucleoplasm
  • 17. Nucleolus  dark spot  in the middle of the nucleus  produce ribosomes Functions :  Store genetics material and information  Site of cell division  Produce RNA & DNA
  • 19.  In animal cells, continuous with nuclear membrane  Extends throughout cytoplasm  Two regions - rough and smooth Rough ER Smooth ER
  • 20.  Functions ROUGH ER SMOOTH ER Prominent in cells that manufacture protein for export ; digestive enzymes, hormones, structural protein or antibodies Necessary for steroid synthesis, metabolism and detoxification of substances in liver, phospholipid synthesis and excitation- contraction coupling in skeletal muscle With ribosome Without ribosome
  • 22.  Puts finishing touches on proteins and lipids that arrive from ER  Packages finished material for shipment to final destinations  Material arrives and leaves in vesicles
  • 23.
  • 25. ATP-producing powerhouses (aerobic respiration) Membranes form two distinct compartments ATP-making machinery embedded in inner mitochondrial membrane
  • 26. outer compartment inner compartment outer membrane inner membrane repeated foldings of inner membrane (cristae)
  • 28.  a vesicle  with enzymes  digest biological macromolecules  ER to Golgi body  Autophagy  Autolysis
  • 29.
  • 31.  Function as the site of mRNA translation during protein synthesis  Free-wheeling in cytoplasm / attached to ER  TWO subunits ; small and large
  • 32.
  • 34.  Site of photosynthesis
  • 36.  Type of cytoskeleton (network of fiber)  In mitosis; source of mitotic spindle  Functions ;  Organise the formation of spindle fiber  Organise the formation of cilia and flagella (9+2 / 9+3)
  • 37.
  • 39.  a sac  In cytoplasm  Types ;  Lysosome  Peroxisome  Shuttle vesicles  Secretory vesicles  Endocytosis vesicles  Storage vesicles
  • 40. ♫ ♪ Take 5 ♫ ♪
  • 42.  The movement of molecules are based on concentration gradient  Concentration gradient ;  Means the number of molecules or ions in one region is different than the number in another region  In the absence of other forces, a substance moves from a region where it is more concentrated to one where it‟s less concentrated - “down” gradient
  • 44. PASSIVE TRANSPORT  Does not require ATP  High to low of concentration gradient  Types ;  Diffusion  Osmosis  Facilitated diffusion
  • 45. Diffusion  movement of molecules or ions down a concentration gradient  the molecules move using a natural kinetic energy
  • 46.
  • 47. what determines the rate of diffusion?
  • 48. Steepness of concentration gradient ◦ Steeper gradient, faster diffusion Molecular size ◦ Smaller molecules, faster diffusion Temperature ◦ Higher temperature, faster diffusion Surface area ◦ Higher surface area, faster diffusion
  • 49. Molecules that diffuse through cell membranes Oxygen – Non-polar so diffuses very quickly. Carbon dioxide – Polar but very small so diffuses quickly. Water – Polar but also very small so diffuses quickly.
  • 50. Simple Diffusion small, nonpolar molecules (ex. O2, CO2) Polar molecules (ex. Glucose, water) ions (ex. H+, Na+, K+) LIPID-SOLUBLE WATER-SOLUBLE LIPID-SOLUBLE
  • 51. Facilitated diffusion  movement of molecules or ions  down a concentration gradient  with the help of transport protein  Types of transport protein ;  Carrier protein  Channel protein
  • 52. glucose transporter solute (glucose) low [ conc‟n] of glucose outside cell > inside Glucose binds Protein change shapeGlucose is exposed to fluid on the other side of the membrane, detaches, leaves channel
  • 53. Osmosis  Water movement  across a partially permeable membrane  from an area of high water potential (low solute concentration) to an area of low water potential (high solute concentration)
  • 54. Hypotonic Solution membrane permeable to water but not to solutes Hypertonic Solution
  • 55. Tonicity 2% sucrose solution distilled water 10% sucrose solution 2% sucrose solution Hypotonic Conditions Hypertonic Conditions Isotonic Conditions
  • 56. Isotonic solution Hypotonic solution Hypertonic solution H2O H2O (1) Normal (2) Lysed H2O H2O H2O H2O Animal cell Plant cell (4) Flaccid (5) Turgid (6) Shriveled (plasmolyzed) (3) Shriveled Plasma membrane H2O H2O
  • 57. ACTIVE TRANSPORT  Transport of molecule  Low to high of concentration gradient  require ATP  Involves carrier protein
  • 58. ATP ADP Pi higher calcium concentration lower calcium concentration Calcium enter tunnel Calcium pump ATP transfer a phosphate group Shape change –Ca release Shape returns o its resting position
  • 59.
  • 60. ENDOCYTOSIS  Transport of macromolecules  Involves formation of vesicle  Into the cell  Two types;  Phagocytosis  Pinocytosis
  • 61.
  • 63.  Phagocytosis; “cellular eating”.  In phagocytosis, the cell engulfs a particle by extending pseudopodia around it and packaging it in a large vacuole.  The contents of the vacuole are digested when the vacuole fuses with a lysosome.
  • 64.  In pinocytosis; “cellular drinking”  a cell creates a vesicle around a droplet of extracellular fluid.
  • 65. EXOCYTOSIS  Transport of molecules  Out of a cell  Enclosed in vesicle  Move to cell surface membrane  Fuse  release
  • 66.
  • 67. Both diffusion and facilitated diffusion are forms of passive transport of molecules down their concentration gradient, while active transport requires an investment of energy to move molecules against their concentration gradient.