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Cellular composition


DNA is contained in nucleus of
cell



Phospho-lipids and proteins
combined to form cell
membrane



Lipids are fats
Base pairs


A=T – double hydrogen bond



G



Nucleotide (3 chemical
groups)

C – triple hydrogen bond

 Sugar

– deoxyribose

 contains

 Phosphate
A

5 Carbon atoms

group

base (A, T, G, C)
DNA molecule

DNA is a very large molecule made up of a long
chain of sub-units

The sub-units are called nucleotides
Each nucleotide is made up of
a sugar called deoxyribose
a phosphate group -PO4 and

an organic base
Ribose & deoxyribose

Ribose is a sugar, like glucose, but with only five
carbon atoms in its molecule
Deoxyribose is almost the same but lacks one
oxygen atom
Both molecules may be represented by the symbol
The bases

The most common organic bases are
Adenine

(A)

Thymine

(T)

Cytosine

(C)

Guanine

(G)
Nucleotides

The deoxyribose,the phosphatend one of the bases
a
Combine to form a nucleotide
PO4
adenine

deoxyribose
7

Joined nucleotides
PO4

PO4

PO4

PO4

sugar-phosphate + bases
backbone

A molecule of
DNA is formed
by millions of
nucleotides
joined
together in a
long chain
In fact, the DNA usually consists of a double
strand of nucleotides
The sugar-phosphate chains are on the outside
and the strands are held together by chemical
bonds between the bases
2-stranded DNA
PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4
Bonding 1

The bases always pair up in the same way

Adenine forms a bond with Thymine
Adenine

Thymine

and Cytosine bonds with Guanine
Cytosine

Guanine
Bonding 2
PO4

PO4
adenine

thymine

PO4

PO4
cytosine

guanine

PO4
PO4

PO4

PO4
Pairing up
PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4

PO4
The paired strands are coiled into a spiral called

A DOUBLE HELIX
THE DOUBLE HELIX
bases

sugar-phosphate
chain
Physical Structure (cont’d)


Chains are anti-parallel (i.e
in opposite directions)



Diameter and periodicity
are consistent



10 bases/ turn





2.0 nm
3.4 nm/ turn

Width consistent because of
pyrimidine/purine pairing
Physical Structure (cont’d)
FORMS OF DNA
Supercoiling
DNA is Dynamic


Like proteins, DNA has 3º structure



Why so many deviations from normal conformation?



Enhances responsiveness





Effects on transcription (gene expression)

May also serve in packaging

NOTE: most cellular DNA exists as protein containing supercoils
Denaturation of DNA


Denaturation by heating.



How observed?


A260



For dsDNA,

A260=1.0 for 50 µg/ml


For ssDNA and RNA A260=1.0 for 38
µg/ml



For ss oligos
A260=1.0 for 33 µg/ml



The T at which ½ the DNA
sample is denatured is
called the melting
temperature (Tm)

Hyperchromic shift
A DIY model of
part of a DNA
molecule
Accreditation to the following
http://www.present.udel.edu/biotech/rD
NA.html
http://www.sumanasinc.com/webcontent/anisam
ples/molecularbiology/plasmidcloning_fla.html
http://www.worldofteaching.com

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Powerpoint presentation in DNA of living organisms