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13:30	Welcome reception 14:00	Introduction 14:05	Investigating the human gut flora using metagenomics (prof. dr. JeroenRaes, VUB) 14:25	The post-genomic era: epigenetic sequencing applications and data 				integration (dr. ir.MatéOngenaert, CMGG - UGent) 14:45	Visualisationof large datasets (drs. Geert Trooskens, BIOBIX - UGent) 15:00	Race against the sequencing machine: processing of raw DNA sequence 			data at the Genomics Core (dr. Luc Dehaspe, Genomics Core - UZLeuven) 15:20	Coffee break 15:45	Integrative transcriptomicsto study non-coding RNA functions (dr. ir. 			Pieter Mestdagh, CMGG - UGent) 16:05	Large scale machine learning challenges for systems biology (dr. YvanSaeys, VIB - UGent) 16:25	Pathway analysis: example from the bench (drs.JolienVermeire, HIVlab, 			Department of Clinical Chemistry, Microbiology and Immunology - UGent) 16:40	Proteomics and cross-omics integration (prof. dr. LennartMaertens (VIB - 		UGent) 17:00	Closure
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UGent, UA, KUL, ULG, ULB, … ILVO, SCK, … (pediatric immunology, microbiology, medical genetics, computer sciences, physiology, dermatology, plant systems biology, …)
Applied Math, Bayer Bioscience, Evolved Analytics Europe, Genetwister, Janssens Pharmaceuticals, Roche, …130

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Introduction

  • 1.
  • 2. 13:30 Welcome reception 14:00 Introduction 14:05 Investigating the human gut flora using metagenomics (prof. dr. JeroenRaes, VUB) 14:25 The post-genomic era: epigenetic sequencing applications and data integration (dr. ir.MatéOngenaert, CMGG - UGent) 14:45 Visualisationof large datasets (drs. Geert Trooskens, BIOBIX - UGent) 15:00 Race against the sequencing machine: processing of raw DNA sequence data at the Genomics Core (dr. Luc Dehaspe, Genomics Core - UZLeuven) 15:20 Coffee break 15:45 Integrative transcriptomicsto study non-coding RNA functions (dr. ir. Pieter Mestdagh, CMGG - UGent) 16:05 Large scale machine learning challenges for systems biology (dr. YvanSaeys, VIB - UGent) 16:25 Pathway analysis: example from the bench (drs.JolienVermeire, HIVlab, Department of Clinical Chemistry, Microbiology and Immunology - UGent) 16:40 Proteomics and cross-omics integration (prof. dr. LennartMaertens (VIB - UGent) 17:00 Closure
  • 3.
  • 4. UGent, UA, KUL, ULG, ULB, … ILVO, SCK, … (pediatric immunology, microbiology, medical genetics, computer sciences, physiology, dermatology, plant systems biology, …)
  • 5. Applied Math, Bayer Bioscience, Evolved Analytics Europe, Genetwister, Janssens Pharmaceuticals, Roche, …130
  • 6.
  • 7. mixed audience in terms of background
  • 9. 2 PhD students, 4 postdocs, 2 professors
  • 10. metagenomics, epigenetics, functional genomics, proteomics, systems biology
  • 11. commercial tools vs. open source
  • 13. use informatics to solve biological problems
  • 14. none of the speakers is a trained bio-informatician “don’t be afraid to start, just dig in”
  • 15.
  • 17. interact – discuss – ask questions