The evolution of academic papers involves a paradigm shift of the scholarly communication when the medium changes to electronic distribution of knowledge.

1. Enhanced Publications Maurice Vanderfeesten & Magchiel Bijsterbosch, SURFfoundation Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 0

2. Outline SURF Enhanced Publications What? How? Interoperability Visualisations Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 1

3. Who we are Maurice Vanderfeesten MSc. Information Science @ UU Project Coordinator knowledge infrastructure @ SURF Magchiel Bijsterbosch Principal Domain Architect Project Coordinator knowledge architecture @ SURF Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 2

4. SURF SURF is the Netherlands higher education and research partnership organisation for network services and information and communications technology (ICT). The Mission of SURF is to exploit and improve a common advanced ICT infrastructure that will enable higher education institutions to better realize their own ambitions and improve the quality of learning, teaching and research. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 3

5. Onderzoeksdata onderdeel verschillende werkpakketten SURFshare verrijkte publicaties virtuele werkomgevingen open toegang, kwaliteit en impact architectuur en infrastructuur permanente toegankelijkheid SURF Innovation for Education Research & Business Processes Legal software for an illegal price Gigabit Internet for Higher Education and Research Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 4

6. SURFfoundation Research Education Business Processes Innovation for Research, Education and Business Processes Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 5

7. SURFshare SURFshare-programma 2007-2011 Enhanced Publications Collaboratories Quality and Impact of Open Access Publications Architecture and Infrastructure Knowledge DisseminationforUniversities for applied sciences Access to Research Data SURFshare Community Management Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 6

8. History of Enhanced Publications 7 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 Paradigm shift for scholarly work Paper paradigm Digital paradigm Linear Publication Modular Publication - Kircz, 1998 Enhanced Publication definition: full text publication + related material

9. Modular publication 8 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 Reusable parts

10. Enhanced Publication- information within - 9 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 2010 links “Semantic links to Exisiting web-resources” data audio creator video

11. EP’s in practice 10 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 2010

12. The big picture- information between - Scientific work related in harmony 11 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 2010

13. Why sharing data? 12 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 Source: http://www.plosone.org/article/info:doi/10.1371/journal.pone.0000308

14. EP process in verbs 13 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 Present Exchange Create Store

15. EP infrastructure overview 14 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 2010 Present Exchange Create

16. Standards needed for information exchange 15 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 2010

17. Start with a common datamodel 16 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010

18. Linked Data Interoperability 17 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010

19. Linked Data Interoperability Links to TED talks Tim Berners-Lee http://www.ted.com/talks/tim_berners_lee_on_the_next_web.html Hans Rosling http://www.ted.com/talks/lang/eng/hans_rosling_reveals_new_insights_on_poverty.html 18 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010

20. MAGCHIEL 19 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010

21. HigherComplexity Tender Specs Projecten HigherComplexity Evaluatie Tender Specs Projecten Evaluatie Tender Specs Projecten Evaluatie Innovation cycle 2011, first EP’s visualised together 2010, standardisethe variances - accepted data model 2009, first real use cases: big implementation variances 2008 – first demo in DRIVER II Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 20 2007 – concept with OAI-ORE

22. 1. Proof of Concept: Driver Demonstrator 2008 …relationshipsbetweenobjects (RDF, OAI-ORE). http://driver2.dans.knaw.nl/demonstrator/html/index.html Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 21

23. DriverDemonstrator – Content – Resource Map Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 22 2008

24. DriverDemonstrator - Relations Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 23 2008

25. DriverDemonstrator–Content-1 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 24 2008

26. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 25 2008

27. Article at Nature Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 26 2008

28. Article (postprint) in the Repository of the University of Twente Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 27 2008

29. And otherobjectssuch as video’s Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 28 2008

30. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 29 2008

31. Tender Projects- Video summary - 30 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 http://www.youtube.com/watch?v=e_KJTsr1fys

32. Tender Projects (2nd round) (1/5) JALC Journal of Archaeology in the Low Countries: Open Access journal with Enhanced Publications within the Domain of Archeology Enhancing Publications with Archaeological Data (GIS maps, pictures, Excavation maps etc.) Presenting the objects within the publication Link: http://dpc.uba.uva.nl/jalc/01/nr01/a04 (if not): see screenshots Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 31 2009

33. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 32 2009

34. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 33 2009

35. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 34 2009

36. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 35 2009

37. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 36 2009

38. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 37 2009

39. Projects (2/5) 2. Veteran Tapes Audio interviews and transcriptions of interviews are linked to parts of publications. Pointing towards Fragments of interviews Interdisciplinary (psychologists, historians, linguists, sociologists) Researchers participate and see the added value but when the funding stops there is no other reward for them to keep doing what they’re doing. Will result in multiple Enhanced Publications one of which is an Enhanced e-book. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 38 2009

40. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 39 2009

41. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 40 2009

43. Produced 25 Enhanced E-Theses as a showcase

44. Had to built their own solution for the repository (Dspace 1.5 isn’t ready for EP’s)

45. Investigated the possibility of this being a ‘Library Service’ for Dissertations at the UU

46. Broad scope of disciplines; ran into the issue of the lacking of ontology'sLecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 41 2009

47. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 42 2009

49. Delivered Use cases from 3 different disciplines

50. Focus on the Visual relationships between objectshttp://escape.utwente.nl/show/80 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 43 2009

51. ESCAPE Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 44 2009

52. ESCAPE Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 45 2009

53. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 46 2009

54. Projecten (5/5) 5. DatapluS Enhance Publications with datasets and syntax in two Subject repositories NKO (National Voters Survey) and EVS (European Values Studies) Built a Enhanced Publication Tool (EP Editor) with which researchers could Enhance their own Publications Publications in Repository Linked with Data from Data archives and syntax Extra work for researchers…. Metadata capture rather during research than retrospectively Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 47 2009

55. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 48 DATAplus (2/3) 2009

56. DATAplus (3/3) 49 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 2009

57. Tenders 2008 Video summary Enhanced Publication (subtitled) http://www.surffoundation.nl/nl/actueel/Pages/KorteinformatievefilmsoverVerrijktePublicaties.aspx http://www.youtube.com/watch?v=e_KJTsr1fys Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 50 2009

58. The http://beta.cell.com/index.php/2009/07/article-of-the-future/ Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 51

59. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 52

60. Visualisation types 53 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 Data visualisation Aggregation Graph visualisation Rich Internet Publication visualisation

61. Aggregation Visualisation - within and between - 54 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 2010 B-e-t-w-e-e-n - Within - Zooming out Broader context - fewer details - Narrow context - more details -

62. Aggregation Visualisationagile software development 55 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 2010 ESCAPE visualiser improvement (-within- visualisation) Sprint 1 describe user stories more detailed FD/TD Interaction concept based on 'must have' functionalities Technical architecture Communication with JSON webservices Rendering of elements in different browsers Result First interaction concept Javascript architectuur with simple front-end Clientcomponent Servercomponent RPC/JSON

63. Aggregation Visualisationagile software development 56 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 2010 ESCAPE visualiser improvement (-within- visualisation) grouping user stories

64. Sprint 2 Sprint 3 Develop basic functionalities Medium interaction design Visual concept Result Statisch product using JSON input, rendering elements with minimale design Basic documentation Develop extra functionalities Detailed design Option to focus on: design animation pluggability / extensibility Result Final product 57 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 Aggregation Visualisationagile software development 2010 ESCAPE visualiser improvement (-within- visualisation)

65. Data visualisation 58 Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 source: http://www.ted.com/talks/gary_flake_is_pivot_a_turning_point_for_web_exploration.html more: http://www.microsoft.com/silverlight/pivotviewer/

66. Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 59

67. More Information DRIVER series: http://dare.uva.nl/aup/nl/record/316871- The European Repository Landscape 2008 : Inventory of Digital Repositories for Research Output - Van der Graaf, Maurits http://dare.uva.nl/aup/nl/record/316870- Emerging Standards for Enhanced Publications and Repository Technology : Survey on Technology – Van Godtsenhoven, Karen et al. http://dare.uva.nl/aup/nl/record/316849- Enhanced Publications : Linking Publications and Research Data in Digital Repositories - Woutersen-Windhouwer, Saskia et al. SURFshare: Enhanced Publications: http://www.surffoundation.nl/en/themas/openonderzoek/verrijktepublicaties/Pages/default.aspx Flyer Enhanced Publications: http://www.surffoundation.nl/nl/publicaties/Documents/SHAREflyer_verrijkte_publicatie_pdfversie_def_ENG.pdf Short Video’s: http://www.youtube.com/watch?v=e_KJTsr1fys Onderzoeksresultaten in Samenhang (in Dutch): http://www.surffoundation.nl/nl/publicaties/Pages/SURFshareboekVerrijktePublicatiesonderzoeksresultateninsamenhang%E2%80%99.aspx Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 60

68. THANKS! Questions? Maurice Vanderfeesten (vanderfeesten@surf.nl)www.surffoundation.nl/en/themas/openonderzoek/verrijktepublicaties/Magchiel Bijsterbosch (bijsterbosch@surf.nl) Lecture: Enhanced Publications @ Utrecht University | Master: Content and Knowledge Engineering | Course: Design of Interactive Content | 2010 61