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Open research data
importance and benefits of opennes
Store an Open your Data!
Seminar for researchers, doctoral candidates and ÅAU personnel
Turku, 23 October 2017
Åbo Akademi University
Pauli Assinen
University of Helsinki / OpenAIRE NOAD
As open as possible as closed as necessary
2
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen CC-BY
OPENAIRE
Open
Scholarship
Open Science
3
Put research
in context
Promote & align
OA policies
Link to national
infrastructures
Link to
domain discipline
data infras
Link to
open gov
data
initiatives
Link to open
education & learning
environments
Participatory
Infrastructure
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen CC-BY
OpenAIRE - Openess
• Europe’s diverse landscape requires local support
• Different practices, different mentalities
4
People support network
• 33 expert nodes in all
Europe
• (OA) Policy aligning
• Technical assistance
• Training
• Outreach to international
community via COAR
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen CC-BY
Content
5
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
How openness might
influence?
What motivates you in
research?
What motivates EU to
fund research?
What motivates EU to
enhance open science?
Who gets benefits?
EU policies and
H2020 Guidelines
OpenAIRE
Outcomes & Benefits
How openness might influence?
6
Research and Development
activities
Goals
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen CC-BY
Motivation
Motivation in research
What motivates you in research?
7
Sources:
Kothari, C.K. (2006), Research Methodology, Prentice-Hall of India (P) Limited, New Delhi.
Palo, Jorma, (1995), Onko minusta tutkijaksi?, Lääketieteellinen Aikakauskirja Duodecim, 1995;111(19):1827
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen CC-BY
Research degreeSolve problems
Intellectual joy of
creative work
Service to society
Get respectability
directives of government, employment conditions, curiosity
about new things, desire to understand causal relationships,
social thinking and awakening
+
What motivates to make research?
Motivation in research
1. Desire to get a research degree along with its consequential benefits;
2. Desire to face the challenge in solving the unsolved problems, i.e.,
concern over practical problems initiates research;
3. Desire to get intellectual joy of doing some creative work;
4. Desire to be of service to society;
5. Desire to get respectability
However, this is not an exhaustive list of factors motivating people to undertake research studies.
Many more factors such as directives of government, employment conditions, curiosity about new
things, desire to understand causal relationships, social thinking and awakening, and the like may as
well motivate (or at times compel) people to perform research operations.
8
Source: Kothari, C.K. (2006), Research Methodology, Prentice-Hall of India (P) Limited, New Delhi.
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen CC-BY
More competitive EU
What motivates EU to fund research?
9
European Research and
Development activities
EU Commission
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen CC-BY
What motivates EU to enhance open science?
EU Guidelines
Broader access to scientific publications and data therefore helps to:
• build on previous research results (improved quality of results)
• encourage collaboration and avoid duplication of effort (greater
efficiency)
• speed up innovation (faster progress to market means faster growth)
• involve citizens and society (improved transparency of the scientific
process).
10
Source: H2020 Programme Guidelines to the Rules on Open Access to Scientific Publications and Open Access to Research Data in Horizon 2020 Version 3.2
21 March 2017
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen CC-BY
H2020 Guidelines
11
Source: Guidelines to the Rules on Open Access to Scientific Publications and Open Access to Research Data in Horizon 2020, Version 3.2 21 March 2017
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
ResultsResults
Who gets benefits?
12
EU funded Research and
Development activities
EU Infra & Services Horizon 2020
EU Commission Strategy
National policies
Photo: © Joel Grandell / University of Helsinki
Institutional policies
Other funded Research
and Development
activities
Funders’ policies
ResultsResults
ResultsResults
Goal:
More competitive EU
Goal:
More competitive EU
Goal:
Scientific contribution… ?
Goal:
Scientific contribution… ?
Goal:
Enhance scientific
knowledge, earn credit…?
Goal:
Enhance scientific
knowledge, earn credit…?
Publishers’ policies
Evaluators’ policies
Open Science activists
Service providers
Field of science traditions
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen CC-BY
13
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
Source: Danny Kingsley & Sarah Brown: https://aoasg.files.wordpress.com/2013/02/benefitsofopenaccess_cc-by_logo.pdf (CC-BY)
Who gets benefits? Benefits of Open Access
What is research data?
H2020 Guidelines
Research Data
• Refers to information, in particular facts or numbers, collected to be
examined and considered as a basis for reasoning, discussion, or
calculation.
• In a research context, examples of data include statistics, results of
experiments, measurements, observations resulting from fieldwork, survey
results, interview recordings and images. The focus is on research data that
is available in digital form.
• Users can normally access, mine, exploit, reproduce and disseminate
openly accessible research data free of charge.
14
Source: Guidelines to the Rules on Open Access to Scientific Publications and Open Access to Research Data in Horizon 2020, Version 3.2 21 March 2017
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
More competitive EU
Research, Development and Innovation in EU
15
EU Commission
Open Science, Open Innovation, Open to the world – a vision for Europe
Strategy / Targets
- ”R&D/innovation and more efficient energy use makes us more competitive and creates jobs”
Digital Single Market
European Cloud Initiative
• European Open Science Cloud (EOSC)
• European Data Infrastructure (EDI)
• High Performance Computing (HPC)
Horizon 2020 Framework Programme
• Work Programmes
• Annotated Model Grant Agreement
• Guidelines
DG for Research and Innovation (DG RTD)
European Research and Development activities
DG for Communications Networks, Content &
Technology (DG CONNECT)
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 mandate from EU parliament
(28) To increase the circulation and exploitation of knowledge, open access to
scientific publications should be ensured. Furthermore, open access to
research data resulting from publicly funded research under Horizon 2020
should be promoted, taking into account constraints pertaining to privacy,
national security and intellectual property rights.
(REGULATION (EU) No 1291/2013 OF THE EUROPEAN PARLIAMENT AND OF THE COUNCIL of 11 December 2013 - establishing
Horizon 2020 - the Framework Programme for Research and Innovation (2014-2020) and repealing Decision No 1982/2006/EC, Official
Journal of the European Union, 20.12.2013)
16
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 mandate from EU parliament
(28) To increase the circulation and exploitation of knowledge, open access to
scientific publications should be ensured. Furthermore, open access to research data
resulting from publicly funded research under Horizon 2020 should be promoted,
taking into account constraints pertaining to privacy, national security and intellectual
property rights.
17
(REGULATION (EU) No 1291/2013 OF THE EUROPEAN PARLIAMENT AND OF THE COUNCIL of 11 December
2013 - establishing Horizon 2020 - the Framework Programme for Research and Innovation (2014-2020) and
repealing Decision No 1982/2006/EC, Official Journal of the European Union, 20.12.2013)
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
As open as possible
as closed as necessary
H2020 Framework Programme
• Horizon 2020 will help to achieve smart, sustainable and inclusive economic
growth. The goal is to ensure Europe produces world-class science and
technology, removes barriers to innovation and makes it easier for the public
and private sectors to work together in delivering solutions to big challenges facing
our society.
• Horizon 2020 is the biggest EU Research and Innovation programme ever with
nearly €80 billion of funding available over 7 years (2014 to 2020) – in addition
to the private investment that this money will attract. It promises more
breakthroughs, discoveries and world-firsts by taking great ideas from the lab to
the market.
(HORIZON 2020 in brief. The EU Framework Programme for Research & Innovation
http://ec.europa.eu/programmes/horizon2020/en/news/horizon-2020-brief-eu-framework-programme-research-innovation)
18
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Guidelines
EC’s Guidelines on Data Management in Horizon 2020
FAIR principles for research data
1. Findable
2. Accessible
3. Interoperable
4. Re-usable
19
Source: http://ec.europa.eu/research/participants/data/ref/h2020/grants_manual/hi/oa_pilot/h2020-hi-oa-data-mgt_en.pdf
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Guidelines
EC’s Guidelines on Data Management in Horizon 2020
FAIR principles for research data - FINDABLE
F1. (meta)data are assigned a globally unique and eternally persistent
identifier.
F2. data are described with rich metadata.
F3. (meta)data are registered or indexed in a searchable resource.
F4. metadata specify the data identifier.
20
Source: https://www.force11.org/group/fairgroup/fairprinciples
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Guidelines
EC’s Guidelines on Data Management in Horizon 2020
FAIR principles for research data - ACCESSIBLE
A1 (meta)data are retrievable by their identifier using a standardized
communications protocol.
A1.1 the protocol is open, free, and universally implementable.
A1.2 the protocol allows for an authentication and authorization procedure,
where necessary.
A2 metadata are accessible, even when the data are no longer available.
21
Source: https://www.force11.org/group/fairgroup/fairprinciples
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Guidelines
EC’s Guidelines on Data Management in Horizon 2020
FAIR principles for research data - INTEROPERABLE
I1. (meta)data use a formal, accessible, shared, and broadly applicable
language for knowledge representation.
I2. (meta)data use vocabularies that follow FAIR principles.
I3. (meta)data include qualified references to other (meta)data.
22
Source: https://www.force11.org/group/fairgroup/fairprinciples
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Guidelines
EC’s Guidelines on Data Management in Horizon 2020
FAIR principles for research data – RE-USABLE
R1. meta(data) have a plurality of accurate and relevant attributes.
R1.1. (meta)data are released with a clear and accessible data usage
license.
R1.2. (meta)data are associated with their provenance.
R1.3. (meta)data meet domain-relevant community standards.
23
Source: https://www.force11.org/group/fairgroup/fairprinciples
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Work Programmes 2018-2020
The Open Science agenda will be supported, notably through
dedicated data driven actions, the embedding of approaches and
the mainstreaming/promotion of Open Science principles.
24
Source: Horizon 2020 work programme 2018-2020 - Strategic Programme Overarching Document – Working Document
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Calls > Proposals > Evaluation
• Open Access and Open Data defaults
• Opt-outs possible, must have reasons out written
• Openness not evaluation criterion, but must be mentioned
how data is handled or also if their will not be any data
25
ource: https://www.force11.org/group/fairgroup/fairprinciples
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Annotated Model Grant Agreement
ARTICLE 29 – DISSEMINATION OF RESULTS — OPEN ACCESS — VISIBILITY
OF EU FUNDING
• 29.2 Open access to scientific publications
• 29.3 Open access to research data
• 29.4 Information on EU funding — Obligation and right to
use the EU emblem
• 29.5 Disclaimer excluding [Commission][Agency]
responsibility
• 29.6 Consequences of non-compliance
26
Source: H2020 Programme / AGA – Annotated Model Grant Agreement, Version 4.0.1, 20 June 2017
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Annotated Model Grant Agreement
Data management plan
• Actions participating in the pilot must draw up a data management plan (DMP) within the first 6
months of the project implementation.
• The data management plan must support the management life-cycle for all data that will be
collected, processed or generated by the action. It must cover how to make data findable,
accessible, interoperable and re-usable (FAIR), including:
• the handling of data during and after the project
• what data will be collected, processed or generated
• what methodology and standards will be applied
• whether data will be shared / made open access (and how) and, if any, what data will not be shared / made
open access (and why)
• how data will be curated and preserved.
• The data management plan should be updated (and become more precise) as the project evolves.
New versions should be created whenever important changes to the project occur (e.g. new data
sets, changes in consortium policies, etc), at least as part of the mid-term review (if any) and at the
end of the project.
27
Source: H2020 Programme / AGA – Annotated Model Grant Agreement, Version 4.0.1, 20 June 2017
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Annotated Model Grant Agreement
29.6 Consequences of non-compliance
• If a beneficiary breaches any of its obligations under this Article, the grant
may be reduced (see Article 43).
• Such a breach may also lead to any of the other measures described in
Chapter 6.
28
Source: H2020 Programme / AGA – Annotated Model Grant Agreement, Version 4.0.1, 20 June 2017
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
Work Programmes 2018-2020
H2020 regulations and guidelines
29
Europe 2020 strategy and mandate from EU parliament
- ”R&D/innovation and more efficient energy use makes us more competitive and creates jobs”
Horizon 2020 Framework
”Central role of knowledge and innovation in generating growth”
Calls
Proposals and evaluation
Research and development activities
Annotated Model Grant Agreement and other agreements
Data Management Plan
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
Researcher’s context
30
Research
subjects
Research
instruments and
other
infrastructure
Collaboration
existing and
potential
partners
Teaching and
supervising
students and
postgraduates
Development of
teaching in her
faculty
Research projects
in different phases
Requirements from
university administration
and funders
Open Data
Photo: © Joel Grandell / University of Helsinki
Adapted from
Mari Elisa Kuusniemi: https://www.slideshare.net/MariKuusniemi/unica-data-librarian
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
H2020 Impact and Future
• H2020 Interim evaluation results
• https://ec.europa.eu/research/evaluations/index_en.cfm?pg=h2020evaluation
• FP9 planning
• LAB – FAB – APP Investing in the European future we want - Report of the independent High Level
Group on maximising the impact of EU Research & Innovation Programmes
• European Commission Directorate-General for Research and Innovation Directorate A – Policy Development and Coordination
Unit A.5 – Better Regulation
31
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
LAB – FAB – APP recommendations
• Recommendations for designing a post-2020 EU programme for research
and innovation
• “We need research (“Labs”), innovation (competitive fabrication (“Fabs”)
and applications for the benefit of all (“Apps”).
• Recommendation 8. Mobilise and involve citizens
• “Whenever possible, citizen science should be encouraged, where citizens become providers and users
of data. This will enforce and give meaning to the policy of open access to publications and data;
this openness should enable citizens and citizen groups to participate in evidence-based policy and
decision making.”
32
Source: LAB – FAB – APP Investing in the European future we want - Report of the independent High Level Group on maximising the impact of EU Research & Innovation Programmes
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
LAB – FAB – APP recommendations
• Recommendation 10. Make international R&I cooperation a trademark of EU
research and innovation
• “… open the EU R&I programme to association by trading partners of a similar level of
excellence, such as Canada and Australia. Association of non-EU countries to future
EU R&I programmes should be governed by excellence in R&I, not confined to a
particular part of the world. This will make the EU programme the potential nucleus
of a global programme for open science and open innovation, exploiting good
regulatory and improving international trading and investment conditions.”
33
Source: LAB – FAB – APP Investing in the European future we want - Report of the independent High Level Group on maximising the impact of EU Research & Innovation Programmes
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
EU links
• EC’s Guide on Open Access to Scientific Publications and Research Data
in Horizon 2020:
• http://ec.europa.eu/research/participants/data/ref/h2020/grants_manual/hi/oa_pilot/
h2020-hi-oa-pilot-guide_en.pdf
• EC’s Guidelines on Data Management in Horizon 2020:
• http://ec.europa.eu/research/participants/data/ref/h2020/grants_manual/hi/oa_pilot/
h2020-hi-oa-data-mgt_en.pdf
• EC’s Agenda on Open Science:
• https://ec.europa.eu/digital-agenda/en/open-science
• DCC’s DMPonline tool: https://dmponline.dcc.ac.uk
34
Store and Open your Data, Turku, Finland, 23rd October 2017
Open research data – Pauli Assinen
OpenAIRE
An Open Knowledge &
Research Information Infrastructure
Who we are
• In 24x7 operation since Dec
2010
• OpenAIRE
• OpenAIREplus
• OpenAIRE2020
• A legal entity in 2017?
• Consortium of 50 partners
• Institutional, national and
international perspectives on OA
policies & e-Infrastructures
Open Access experts
• Building efficient e-Infra technologies
• State of the art technologies (big
data, linked data)
Information & Computer
Science experts
• Legal &policy recommendations
Legal experts
• Best practices for data
• Linking to data infrastructures
Data communities
36
WHAT WE DO
37
38
Literature
Repositorie
s
OA
Journals
Funding Info
Validation
Cleaning
De-duplicating
Inferring
Linking
Organiz
ations
Projects
Authors
Dataset
s
Publicat
ions
Data
s
Data
Provider
s
…
Monitoring
Reporting
Evaluation
Impact
Classification
Clustering
Analysis
CRIS
systems
A mini EU-CRIS system
Data
Repositorie
s
Metadata
Full text
Usage data
Discovery
Crowdsourcing
Zenodo
APIs
Data Providers OpenAIRE Platform Services
Result: Integrated Scientific Information
System
11.5 mi unique publications
7 mi authors
590+ data providers
130K publications linked to
projects from 3 funders
5.5 K datasets linked to
publications
33K organizations
39
The recipe
40
1. Open data
…for sharing, re-using, validating
…at the source
2. Make data providers interoperable
…for clean, enriched, linked data
3. Provide robust services
…for building trust
…for uptake from 3rd party providers
Transparent &
validated
decision making
processes
2. Interoperability
• Guidelines and standards
• OpenAIRE guidelines for literature, data, CRIS
• Global alignment and adoption (RDA, WDS, W3C, …)
• Identifier schemes
• Synergies with ongoing e-Infras
• Uniform vocabularies
• Interdisciplinary classification
• Multilinguality (e.g., EUROVOC)
• Links to other domains
• Mapping of data models (DCAT, LOM, …)
• LOD
41
3. Service Oriented Infrastructure
• Support & Training
• Sharing scientific results
• OA Publishing & Depositing
• Validating and Registering
• Discovery & Crowdsourcing
• Reporting & Monitoring
• Analytics
• …
42
VALIDATING
Services
Data providers
43
44
DISCOVERY
Services
Crowdsourcing
45
Grant id level
From text mining
MONITORING
Reporting
48
OA estimate for FP7
49
FP7
116.6K publications
Linked to 11.5 K projects
50% OA
0
5000
10000
15000
20000
25000
Jul-13
Aug-13
Sep-13
Oct-13
Nov-13
Dec-13
Jan-14
Feb-14
M
ar-14
Apr-14M
ay-14
Jun-14
Jul-14
Aug-14
Sep-14
Oct-14
Nov-14
Dec-14
Jan-15
0
5000
10000
15000
20000
25000
Jul-13
Aug-13
Sep-13
Oct-13
Nov-13
Dec-13
Jan-14
Feb-14
M
ar-14
Apr-14M
ay-14
Jun-14
Jul-14
Aug-14
Sep-14
Oct-14
Nov-14
Dec-14
Jan-15
Increase of FP7 publications in institutional repos
Other types of monitoring
50
ENV
51
7 %
50 %
30 %
8 %
5 %
Distribution of publications by Journal Impact Factor value
<2 2 to 5 5 to 10 10 to 15 >15
147
147
154
162
185
186
197
218
233
0 100 200 300 400 500
Journal of antimicrobial
chemotherapy (SJR: 2.4)
Nature (SJR: 21.3)
Journal of neuroscience (SJR: 5.8)
Human molecular genetics (SJR:
5.0)
Nature genetics (SJR: 24.1)
Proceedings of the National
Academy of Sciences of the US…
Nucleic acids research (SJR: 6.7)
Journal of biological chemistry
(SJR: 3.4)
Antimicrobial agents and
chemotherapy (SJR: 2.4)
PLoS One (SJR: 1.7)
Number of publications by periodic: top 10
42 %
35 %
16 %
7 %
Distribution of publications by SJR value
<2 2 to 5 5 to 10 >10
40
41
41
47
48
75
75
77
147
185
0 50 100 150 200
Nature Medicine (SJR: 11.0)
Immunity (SJR: 14.3)
Nature Neuroscience (SJR: 11.9)
Neuron (SJR: 12.9)
Molecular Cell (SJR: 14.7)
Nature Methods (SJR: 10.7)
Science (SJR: 12.5)
Cell (SJR: 28.2)
Nature (SJR: 21.3)
Nature Genetics (SJR: 24.1)
Number of publications in periodics with
SJR>10: top 10
Linking to
external
databases
e.g., Scimago
ANALYTICS
to support decision making
52
What analysis?
• Academia – who is doing what, what are the hot topics/trends
• Map of authors, relations, collaborations, trends, …
• Research analytics for decision making
• Ιnfer clusters, communities, correlations, of programmes or
scientific areas
• Over geographical or thematic regions
• Over time
• Identify overlaps or gaps
• Correlate with other funder programmes
• ...
53
1 2 3
From data acquisition to analysis
Get the data. Involve
as many sources as
possible.
Clean. Clean. Clean.
Link to many data
sources & external
dbs.
Classify content
based on known
classifications.
Cluster and
classify based on
statistical
methodology –
Find the unknown
(trends)
Work with
experts to give
meaning to
statistical output.
Visualize: use
online tools to
see different
facets.
54
Clusters
55
56
Correlations
Relation of HEALTH
programme to other FP7
programmes based on
TDM/topic modelling
techniques.
Machine Learning, Feature selection, .. is “hot” after 2003 Trends57
www.openaire.eu
@openaire_eu
facebook.com/groups/openaire
linkedin.com/groups/OpenAIRE-
3893548
Thank you!
pauli.assinen@helsinki.fi
twitter: @passinen
58

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Assinen open research_data_in_store_and_open_your_data_20171023

  • 1. Open research data importance and benefits of opennes Store an Open your Data! Seminar for researchers, doctoral candidates and ÅAU personnel Turku, 23 October 2017 Åbo Akademi University Pauli Assinen University of Helsinki / OpenAIRE NOAD
  • 2. As open as possible as closed as necessary 2 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen CC-BY
  • 3. OPENAIRE Open Scholarship Open Science 3 Put research in context Promote & align OA policies Link to national infrastructures Link to domain discipline data infras Link to open gov data initiatives Link to open education & learning environments Participatory Infrastructure Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen CC-BY
  • 4. OpenAIRE - Openess • Europe’s diverse landscape requires local support • Different practices, different mentalities 4 People support network • 33 expert nodes in all Europe • (OA) Policy aligning • Technical assistance • Training • Outreach to international community via COAR Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen CC-BY
  • 5. Content 5 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen How openness might influence? What motivates you in research? What motivates EU to fund research? What motivates EU to enhance open science? Who gets benefits? EU policies and H2020 Guidelines OpenAIRE
  • 6. Outcomes & Benefits How openness might influence? 6 Research and Development activities Goals Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen CC-BY Motivation
  • 7. Motivation in research What motivates you in research? 7 Sources: Kothari, C.K. (2006), Research Methodology, Prentice-Hall of India (P) Limited, New Delhi. Palo, Jorma, (1995), Onko minusta tutkijaksi?, Lääketieteellinen Aikakauskirja Duodecim, 1995;111(19):1827 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen CC-BY Research degreeSolve problems Intellectual joy of creative work Service to society Get respectability directives of government, employment conditions, curiosity about new things, desire to understand causal relationships, social thinking and awakening +
  • 8. What motivates to make research? Motivation in research 1. Desire to get a research degree along with its consequential benefits; 2. Desire to face the challenge in solving the unsolved problems, i.e., concern over practical problems initiates research; 3. Desire to get intellectual joy of doing some creative work; 4. Desire to be of service to society; 5. Desire to get respectability However, this is not an exhaustive list of factors motivating people to undertake research studies. Many more factors such as directives of government, employment conditions, curiosity about new things, desire to understand causal relationships, social thinking and awakening, and the like may as well motivate (or at times compel) people to perform research operations. 8 Source: Kothari, C.K. (2006), Research Methodology, Prentice-Hall of India (P) Limited, New Delhi. Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen CC-BY
  • 9. More competitive EU What motivates EU to fund research? 9 European Research and Development activities EU Commission Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen CC-BY
  • 10. What motivates EU to enhance open science? EU Guidelines Broader access to scientific publications and data therefore helps to: • build on previous research results (improved quality of results) • encourage collaboration and avoid duplication of effort (greater efficiency) • speed up innovation (faster progress to market means faster growth) • involve citizens and society (improved transparency of the scientific process). 10 Source: H2020 Programme Guidelines to the Rules on Open Access to Scientific Publications and Open Access to Research Data in Horizon 2020 Version 3.2 21 March 2017 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen CC-BY
  • 11. H2020 Guidelines 11 Source: Guidelines to the Rules on Open Access to Scientific Publications and Open Access to Research Data in Horizon 2020, Version 3.2 21 March 2017 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 12. ResultsResults Who gets benefits? 12 EU funded Research and Development activities EU Infra & Services Horizon 2020 EU Commission Strategy National policies Photo: © Joel Grandell / University of Helsinki Institutional policies Other funded Research and Development activities Funders’ policies ResultsResults ResultsResults Goal: More competitive EU Goal: More competitive EU Goal: Scientific contribution… ? Goal: Scientific contribution… ? Goal: Enhance scientific knowledge, earn credit…? Goal: Enhance scientific knowledge, earn credit…? Publishers’ policies Evaluators’ policies Open Science activists Service providers Field of science traditions Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen CC-BY
  • 13. 13 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen Source: Danny Kingsley & Sarah Brown: https://aoasg.files.wordpress.com/2013/02/benefitsofopenaccess_cc-by_logo.pdf (CC-BY) Who gets benefits? Benefits of Open Access
  • 14. What is research data? H2020 Guidelines Research Data • Refers to information, in particular facts or numbers, collected to be examined and considered as a basis for reasoning, discussion, or calculation. • In a research context, examples of data include statistics, results of experiments, measurements, observations resulting from fieldwork, survey results, interview recordings and images. The focus is on research data that is available in digital form. • Users can normally access, mine, exploit, reproduce and disseminate openly accessible research data free of charge. 14 Source: Guidelines to the Rules on Open Access to Scientific Publications and Open Access to Research Data in Horizon 2020, Version 3.2 21 March 2017 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 15. More competitive EU Research, Development and Innovation in EU 15 EU Commission Open Science, Open Innovation, Open to the world – a vision for Europe Strategy / Targets - ”R&D/innovation and more efficient energy use makes us more competitive and creates jobs” Digital Single Market European Cloud Initiative • European Open Science Cloud (EOSC) • European Data Infrastructure (EDI) • High Performance Computing (HPC) Horizon 2020 Framework Programme • Work Programmes • Annotated Model Grant Agreement • Guidelines DG for Research and Innovation (DG RTD) European Research and Development activities DG for Communications Networks, Content & Technology (DG CONNECT) Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 16. H2020 mandate from EU parliament (28) To increase the circulation and exploitation of knowledge, open access to scientific publications should be ensured. Furthermore, open access to research data resulting from publicly funded research under Horizon 2020 should be promoted, taking into account constraints pertaining to privacy, national security and intellectual property rights. (REGULATION (EU) No 1291/2013 OF THE EUROPEAN PARLIAMENT AND OF THE COUNCIL of 11 December 2013 - establishing Horizon 2020 - the Framework Programme for Research and Innovation (2014-2020) and repealing Decision No 1982/2006/EC, Official Journal of the European Union, 20.12.2013) 16 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 17. H2020 mandate from EU parliament (28) To increase the circulation and exploitation of knowledge, open access to scientific publications should be ensured. Furthermore, open access to research data resulting from publicly funded research under Horizon 2020 should be promoted, taking into account constraints pertaining to privacy, national security and intellectual property rights. 17 (REGULATION (EU) No 1291/2013 OF THE EUROPEAN PARLIAMENT AND OF THE COUNCIL of 11 December 2013 - establishing Horizon 2020 - the Framework Programme for Research and Innovation (2014-2020) and repealing Decision No 1982/2006/EC, Official Journal of the European Union, 20.12.2013) Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen As open as possible as closed as necessary
  • 18. H2020 Framework Programme • Horizon 2020 will help to achieve smart, sustainable and inclusive economic growth. The goal is to ensure Europe produces world-class science and technology, removes barriers to innovation and makes it easier for the public and private sectors to work together in delivering solutions to big challenges facing our society. • Horizon 2020 is the biggest EU Research and Innovation programme ever with nearly €80 billion of funding available over 7 years (2014 to 2020) – in addition to the private investment that this money will attract. It promises more breakthroughs, discoveries and world-firsts by taking great ideas from the lab to the market. (HORIZON 2020 in brief. The EU Framework Programme for Research & Innovation http://ec.europa.eu/programmes/horizon2020/en/news/horizon-2020-brief-eu-framework-programme-research-innovation) 18 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 19. H2020 Guidelines EC’s Guidelines on Data Management in Horizon 2020 FAIR principles for research data 1. Findable 2. Accessible 3. Interoperable 4. Re-usable 19 Source: http://ec.europa.eu/research/participants/data/ref/h2020/grants_manual/hi/oa_pilot/h2020-hi-oa-data-mgt_en.pdf Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 20. H2020 Guidelines EC’s Guidelines on Data Management in Horizon 2020 FAIR principles for research data - FINDABLE F1. (meta)data are assigned a globally unique and eternally persistent identifier. F2. data are described with rich metadata. F3. (meta)data are registered or indexed in a searchable resource. F4. metadata specify the data identifier. 20 Source: https://www.force11.org/group/fairgroup/fairprinciples Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 21. H2020 Guidelines EC’s Guidelines on Data Management in Horizon 2020 FAIR principles for research data - ACCESSIBLE A1 (meta)data are retrievable by their identifier using a standardized communications protocol. A1.1 the protocol is open, free, and universally implementable. A1.2 the protocol allows for an authentication and authorization procedure, where necessary. A2 metadata are accessible, even when the data are no longer available. 21 Source: https://www.force11.org/group/fairgroup/fairprinciples Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 22. H2020 Guidelines EC’s Guidelines on Data Management in Horizon 2020 FAIR principles for research data - INTEROPERABLE I1. (meta)data use a formal, accessible, shared, and broadly applicable language for knowledge representation. I2. (meta)data use vocabularies that follow FAIR principles. I3. (meta)data include qualified references to other (meta)data. 22 Source: https://www.force11.org/group/fairgroup/fairprinciples Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 23. H2020 Guidelines EC’s Guidelines on Data Management in Horizon 2020 FAIR principles for research data – RE-USABLE R1. meta(data) have a plurality of accurate and relevant attributes. R1.1. (meta)data are released with a clear and accessible data usage license. R1.2. (meta)data are associated with their provenance. R1.3. (meta)data meet domain-relevant community standards. 23 Source: https://www.force11.org/group/fairgroup/fairprinciples Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 24. H2020 Work Programmes 2018-2020 The Open Science agenda will be supported, notably through dedicated data driven actions, the embedding of approaches and the mainstreaming/promotion of Open Science principles. 24 Source: Horizon 2020 work programme 2018-2020 - Strategic Programme Overarching Document – Working Document Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 25. H2020 Calls > Proposals > Evaluation • Open Access and Open Data defaults • Opt-outs possible, must have reasons out written • Openness not evaluation criterion, but must be mentioned how data is handled or also if their will not be any data 25 ource: https://www.force11.org/group/fairgroup/fairprinciples Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 26. H2020 Annotated Model Grant Agreement ARTICLE 29 – DISSEMINATION OF RESULTS — OPEN ACCESS — VISIBILITY OF EU FUNDING • 29.2 Open access to scientific publications • 29.3 Open access to research data • 29.4 Information on EU funding — Obligation and right to use the EU emblem • 29.5 Disclaimer excluding [Commission][Agency] responsibility • 29.6 Consequences of non-compliance 26 Source: H2020 Programme / AGA – Annotated Model Grant Agreement, Version 4.0.1, 20 June 2017 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 27. H2020 Annotated Model Grant Agreement Data management plan • Actions participating in the pilot must draw up a data management plan (DMP) within the first 6 months of the project implementation. • The data management plan must support the management life-cycle for all data that will be collected, processed or generated by the action. It must cover how to make data findable, accessible, interoperable and re-usable (FAIR), including: • the handling of data during and after the project • what data will be collected, processed or generated • what methodology and standards will be applied • whether data will be shared / made open access (and how) and, if any, what data will not be shared / made open access (and why) • how data will be curated and preserved. • The data management plan should be updated (and become more precise) as the project evolves. New versions should be created whenever important changes to the project occur (e.g. new data sets, changes in consortium policies, etc), at least as part of the mid-term review (if any) and at the end of the project. 27 Source: H2020 Programme / AGA – Annotated Model Grant Agreement, Version 4.0.1, 20 June 2017 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 28. H2020 Annotated Model Grant Agreement 29.6 Consequences of non-compliance • If a beneficiary breaches any of its obligations under this Article, the grant may be reduced (see Article 43). • Such a breach may also lead to any of the other measures described in Chapter 6. 28 Source: H2020 Programme / AGA – Annotated Model Grant Agreement, Version 4.0.1, 20 June 2017 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 29. Work Programmes 2018-2020 H2020 regulations and guidelines 29 Europe 2020 strategy and mandate from EU parliament - ”R&D/innovation and more efficient energy use makes us more competitive and creates jobs” Horizon 2020 Framework ”Central role of knowledge and innovation in generating growth” Calls Proposals and evaluation Research and development activities Annotated Model Grant Agreement and other agreements Data Management Plan Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 30. Researcher’s context 30 Research subjects Research instruments and other infrastructure Collaboration existing and potential partners Teaching and supervising students and postgraduates Development of teaching in her faculty Research projects in different phases Requirements from university administration and funders Open Data Photo: © Joel Grandell / University of Helsinki Adapted from Mari Elisa Kuusniemi: https://www.slideshare.net/MariKuusniemi/unica-data-librarian Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 31. H2020 Impact and Future • H2020 Interim evaluation results • https://ec.europa.eu/research/evaluations/index_en.cfm?pg=h2020evaluation • FP9 planning • LAB – FAB – APP Investing in the European future we want - Report of the independent High Level Group on maximising the impact of EU Research & Innovation Programmes • European Commission Directorate-General for Research and Innovation Directorate A – Policy Development and Coordination Unit A.5 – Better Regulation 31 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 32. LAB – FAB – APP recommendations • Recommendations for designing a post-2020 EU programme for research and innovation • “We need research (“Labs”), innovation (competitive fabrication (“Fabs”) and applications for the benefit of all (“Apps”). • Recommendation 8. Mobilise and involve citizens • “Whenever possible, citizen science should be encouraged, where citizens become providers and users of data. This will enforce and give meaning to the policy of open access to publications and data; this openness should enable citizens and citizen groups to participate in evidence-based policy and decision making.” 32 Source: LAB – FAB – APP Investing in the European future we want - Report of the independent High Level Group on maximising the impact of EU Research & Innovation Programmes Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 33. LAB – FAB – APP recommendations • Recommendation 10. Make international R&I cooperation a trademark of EU research and innovation • “… open the EU R&I programme to association by trading partners of a similar level of excellence, such as Canada and Australia. Association of non-EU countries to future EU R&I programmes should be governed by excellence in R&I, not confined to a particular part of the world. This will make the EU programme the potential nucleus of a global programme for open science and open innovation, exploiting good regulatory and improving international trading and investment conditions.” 33 Source: LAB – FAB – APP Investing in the European future we want - Report of the independent High Level Group on maximising the impact of EU Research & Innovation Programmes Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 34. EU links • EC’s Guide on Open Access to Scientific Publications and Research Data in Horizon 2020: • http://ec.europa.eu/research/participants/data/ref/h2020/grants_manual/hi/oa_pilot/ h2020-hi-oa-pilot-guide_en.pdf • EC’s Guidelines on Data Management in Horizon 2020: • http://ec.europa.eu/research/participants/data/ref/h2020/grants_manual/hi/oa_pilot/ h2020-hi-oa-data-mgt_en.pdf • EC’s Agenda on Open Science: • https://ec.europa.eu/digital-agenda/en/open-science • DCC’s DMPonline tool: https://dmponline.dcc.ac.uk 34 Store and Open your Data, Turku, Finland, 23rd October 2017 Open research data – Pauli Assinen
  • 35. OpenAIRE An Open Knowledge & Research Information Infrastructure
  • 36. Who we are • In 24x7 operation since Dec 2010 • OpenAIRE • OpenAIREplus • OpenAIRE2020 • A legal entity in 2017? • Consortium of 50 partners • Institutional, national and international perspectives on OA policies & e-Infrastructures Open Access experts • Building efficient e-Infra technologies • State of the art technologies (big data, linked data) Information & Computer Science experts • Legal &policy recommendations Legal experts • Best practices for data • Linking to data infrastructures Data communities 36
  • 39. Result: Integrated Scientific Information System 11.5 mi unique publications 7 mi authors 590+ data providers 130K publications linked to projects from 3 funders 5.5 K datasets linked to publications 33K organizations 39
  • 40. The recipe 40 1. Open data …for sharing, re-using, validating …at the source 2. Make data providers interoperable …for clean, enriched, linked data 3. Provide robust services …for building trust …for uptake from 3rd party providers Transparent & validated decision making processes
  • 41. 2. Interoperability • Guidelines and standards • OpenAIRE guidelines for literature, data, CRIS • Global alignment and adoption (RDA, WDS, W3C, …) • Identifier schemes • Synergies with ongoing e-Infras • Uniform vocabularies • Interdisciplinary classification • Multilinguality (e.g., EUROVOC) • Links to other domains • Mapping of data models (DCAT, LOM, …) • LOD 41
  • 42. 3. Service Oriented Infrastructure • Support & Training • Sharing scientific results • OA Publishing & Depositing • Validating and Registering • Discovery & Crowdsourcing • Reporting & Monitoring • Analytics • … 42
  • 44. 44
  • 46. Grant id level From text mining
  • 47.
  • 49. OA estimate for FP7 49 FP7 116.6K publications Linked to 11.5 K projects 50% OA 0 5000 10000 15000 20000 25000 Jul-13 Aug-13 Sep-13 Oct-13 Nov-13 Dec-13 Jan-14 Feb-14 M ar-14 Apr-14M ay-14 Jun-14 Jul-14 Aug-14 Sep-14 Oct-14 Nov-14 Dec-14 Jan-15 0 5000 10000 15000 20000 25000 Jul-13 Aug-13 Sep-13 Oct-13 Nov-13 Dec-13 Jan-14 Feb-14 M ar-14 Apr-14M ay-14 Jun-14 Jul-14 Aug-14 Sep-14 Oct-14 Nov-14 Dec-14 Jan-15 Increase of FP7 publications in institutional repos
  • 50. Other types of monitoring 50 ENV
  • 51. 51 7 % 50 % 30 % 8 % 5 % Distribution of publications by Journal Impact Factor value <2 2 to 5 5 to 10 10 to 15 >15 147 147 154 162 185 186 197 218 233 0 100 200 300 400 500 Journal of antimicrobial chemotherapy (SJR: 2.4) Nature (SJR: 21.3) Journal of neuroscience (SJR: 5.8) Human molecular genetics (SJR: 5.0) Nature genetics (SJR: 24.1) Proceedings of the National Academy of Sciences of the US… Nucleic acids research (SJR: 6.7) Journal of biological chemistry (SJR: 3.4) Antimicrobial agents and chemotherapy (SJR: 2.4) PLoS One (SJR: 1.7) Number of publications by periodic: top 10 42 % 35 % 16 % 7 % Distribution of publications by SJR value <2 2 to 5 5 to 10 >10 40 41 41 47 48 75 75 77 147 185 0 50 100 150 200 Nature Medicine (SJR: 11.0) Immunity (SJR: 14.3) Nature Neuroscience (SJR: 11.9) Neuron (SJR: 12.9) Molecular Cell (SJR: 14.7) Nature Methods (SJR: 10.7) Science (SJR: 12.5) Cell (SJR: 28.2) Nature (SJR: 21.3) Nature Genetics (SJR: 24.1) Number of publications in periodics with SJR>10: top 10 Linking to external databases e.g., Scimago
  • 53. What analysis? • Academia – who is doing what, what are the hot topics/trends • Map of authors, relations, collaborations, trends, … • Research analytics for decision making • Ιnfer clusters, communities, correlations, of programmes or scientific areas • Over geographical or thematic regions • Over time • Identify overlaps or gaps • Correlate with other funder programmes • ... 53
  • 54. 1 2 3 From data acquisition to analysis Get the data. Involve as many sources as possible. Clean. Clean. Clean. Link to many data sources & external dbs. Classify content based on known classifications. Cluster and classify based on statistical methodology – Find the unknown (trends) Work with experts to give meaning to statistical output. Visualize: use online tools to see different facets. 54
  • 56. 56 Correlations Relation of HEALTH programme to other FP7 programmes based on TDM/topic modelling techniques.
  • 57. Machine Learning, Feature selection, .. is “hot” after 2003 Trends57