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Combining Data Warehousing and Predictive Modeling to Open New Possibilities for Guiding Clinical And Management Decision Making  Nathaniel Israel San Francisco Department of Public Healthnathaniel.israel@sfdph.org Stephen GuerinRedfish Group / Santa Fe Complexstephen@sfcomplex.org San FranciscoDepartment of Public Health
Goals: ,[object Object]
Describe a particular implementation of a decision support framework in SF County
Describe a particular visualization strategy, Agent Based Modeling (ABM)
Demonstrate potential uses of ABM in decision support,[object Object]
Billing Data
Clinical Data CANS Data: System Snapshot of Needs and Functioning Agency -Level Trajectories re: sub-population needs and outcomes  Client –Level Outcomes
System-Level Profile
System-Level Profile
Agency Trajectories
Client –Level Outcomes
Theory: Complex Systems Research Agent-Based Modeling Data Visualization Applied Examples:  Emergency Response Planning Pharmaceutical R&D Portfolio Florida Case Study Ongoing San Francisco Project
Theory: Complex Systems Research Agent-Based Modeling Data Visualization Applied Examples Emergency Response Planning Pharmaceutical R&D Portfolio Florida Case Study Ongoing San Francisco Project
Complex Adaptive Systems How Systems Organize Why Systems Organize
Josh Thorp, stigmergic.net Flocking and Schooling
A simple agent’s behavior Attract Repel Josh Thorp, stigmergic.net
Ants and Pheromones
Theory: Complex Systems Research Agent-Based Modeling Data Visualization Applied Examples:  Emergency Response Planning Pharmaceutical R&D Portfolio Florida Case Study Ongoing San Francisco Project
Zozobra Crowd Dynamics
Roberto Clemente Bridge Open to pedestrian traffic only Fans use bridge to downtown and to closest “T” stations
Managing Case Flows Eli Lilly’s R&D Portfolio Planning
Eli Lilly R&D Portfolio Scheduling $ revenue cost time
Eli Lilly R&D Workflow Simulation and Portfolio Scheduling
Theory: Complex Systems Research Agent-Based Modeling Data Visualization Applied Examples:  Emergency Response Planning Pharmaceutical R&D Portfolio Florida Case Study Ongoing San Francisco Project
Input is simple spreadsheet
Client Trajectories Number of Days in a Placement
Client Trajectories Number of Days in a Placement
Client Trajectories Distance Metric
Dendrogram
Capturing Direction of Flow
Capturing Direction of Flow Number of Days in a Placement
Capturing Direction of Flow Number of Transitions between Placements
Agent-based Clustering (Frey and Dueck, 2007) Science Magazine
Agent-based Clustering
Theory: Complex Systems Research Agent-Based Modeling Data Visualization Applied Examples:  Emergency Response Planning Pharmaceutical R&D Portfolio Florida Case Study Ongoing San Francisco Project
Visualization Project Scope clients’ movement between levels of care over time.  agencies client movement over time. service use by demographic and clinical characteristics, including gender, age, ethnicity, and diagnosis. Nate’s “What” client flows from Billing DataWill be integrating the “Why” from Clinical Data
Not all RUs are displayed
Not all RUs are displayed
Opensource or Free Toolsfor visualization and agent-based modeling Netlogohttp://ccl.northwestern.edu/netlogo/ Processinghttp://www.processing.org Nodeboxhttp://www.nodebox.net Open Frameworkshttp://www.openframeworks.cc/ HTML5 with Javascript
Combining Data Warehousing and Predictive Modeling to Open New Possibilities for Guiding Clinical And Management Decision Making  Nathaniel Israel San Francisco Department of Public Healthnathaniel.israel@sfdph.org Stephen GuerinRedfish Group / Santa Fe Complexstephen@sfcomplex.org San FranciscoDepartment of Public Health
Eli Lilly R&D Portfolio Scheduling $ revenue cost time
Eli Lilly R&D Workflow Simulation and Portfolio Scheduling
Project Scope Visualize client flow through the public mental health service system based on Medicaid billing data:  1) Visualize clients’ movement (service use) between levels of care over time.  2) Visualize each agency’s clients’ movement (service use) over time. 3) Visualize clients’ service use by demographic and clinical characteristics, including  gender, age, ethnicity, and diagnosis. This visualization will allow system stakeholders to understand a) how clients are moving through the system (using services at different levels of care)b) whether / how this flow varies by provider within and across levels of care and c) whether / how this flow varies by client demographic characteristics. The delivered program will also allow for the upload of new data to inform the visualizations, and for the comparison of clients’ service utilization across two distinct periods of time. A procedure document will be included with the program and this document will provide step-by-step instructions that enable users to upload new data to the program. The program will be available to users wherever it is installed and service data is uploaded.
Project Flow
Project Flow
Project Timeline
Project Timeline
Project Flow
Project Flow
Domain Expertise

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CiMH hollywood 2010

  • 1. Combining Data Warehousing and Predictive Modeling to Open New Possibilities for Guiding Clinical And Management Decision Making Nathaniel Israel San Francisco Department of Public Healthnathaniel.israel@sfdph.org Stephen GuerinRedfish Group / Santa Fe Complexstephen@sfcomplex.org San FranciscoDepartment of Public Health
  • 2.
  • 3. Describe a particular implementation of a decision support framework in SF County
  • 4. Describe a particular visualization strategy, Agent Based Modeling (ABM)
  • 5.
  • 7. Clinical Data CANS Data: System Snapshot of Needs and Functioning Agency -Level Trajectories re: sub-population needs and outcomes Client –Level Outcomes
  • 12. Theory: Complex Systems Research Agent-Based Modeling Data Visualization Applied Examples: Emergency Response Planning Pharmaceutical R&D Portfolio Florida Case Study Ongoing San Francisco Project
  • 13. Theory: Complex Systems Research Agent-Based Modeling Data Visualization Applied Examples Emergency Response Planning Pharmaceutical R&D Portfolio Florida Case Study Ongoing San Francisco Project
  • 14. Complex Adaptive Systems How Systems Organize Why Systems Organize
  • 15. Josh Thorp, stigmergic.net Flocking and Schooling
  • 16. A simple agent’s behavior Attract Repel Josh Thorp, stigmergic.net
  • 18.
  • 19. Theory: Complex Systems Research Agent-Based Modeling Data Visualization Applied Examples: Emergency Response Planning Pharmaceutical R&D Portfolio Florida Case Study Ongoing San Francisco Project
  • 21.
  • 22.
  • 23.
  • 24. Roberto Clemente Bridge Open to pedestrian traffic only Fans use bridge to downtown and to closest “T” stations
  • 25.
  • 26.
  • 27.
  • 28. Managing Case Flows Eli Lilly’s R&D Portfolio Planning
  • 29. Eli Lilly R&D Portfolio Scheduling $ revenue cost time
  • 30. Eli Lilly R&D Workflow Simulation and Portfolio Scheduling
  • 31. Theory: Complex Systems Research Agent-Based Modeling Data Visualization Applied Examples: Emergency Response Planning Pharmaceutical R&D Portfolio Florida Case Study Ongoing San Francisco Project
  • 32. Input is simple spreadsheet
  • 33.
  • 34. Client Trajectories Number of Days in a Placement
  • 35. Client Trajectories Number of Days in a Placement
  • 38.
  • 39.
  • 41. Capturing Direction of Flow Number of Days in a Placement
  • 42. Capturing Direction of Flow Number of Transitions between Placements
  • 43. Agent-based Clustering (Frey and Dueck, 2007) Science Magazine
  • 45. Theory: Complex Systems Research Agent-Based Modeling Data Visualization Applied Examples: Emergency Response Planning Pharmaceutical R&D Portfolio Florida Case Study Ongoing San Francisco Project
  • 46. Visualization Project Scope clients’ movement between levels of care over time. agencies client movement over time. service use by demographic and clinical characteristics, including gender, age, ethnicity, and diagnosis. Nate’s “What” client flows from Billing DataWill be integrating the “Why” from Clinical Data
  • 47.
  • 48.
  • 49. Not all RUs are displayed
  • 50.
  • 51. Not all RUs are displayed
  • 52.
  • 53.
  • 54.
  • 55.
  • 56.
  • 57.
  • 58.
  • 59.
  • 60.
  • 61.
  • 62. Opensource or Free Toolsfor visualization and agent-based modeling Netlogohttp://ccl.northwestern.edu/netlogo/ Processinghttp://www.processing.org Nodeboxhttp://www.nodebox.net Open Frameworkshttp://www.openframeworks.cc/ HTML5 with Javascript
  • 63. Combining Data Warehousing and Predictive Modeling to Open New Possibilities for Guiding Clinical And Management Decision Making Nathaniel Israel San Francisco Department of Public Healthnathaniel.israel@sfdph.org Stephen GuerinRedfish Group / Santa Fe Complexstephen@sfcomplex.org San FranciscoDepartment of Public Health
  • 64. Eli Lilly R&D Portfolio Scheduling $ revenue cost time
  • 65. Eli Lilly R&D Workflow Simulation and Portfolio Scheduling
  • 66. Project Scope Visualize client flow through the public mental health service system based on Medicaid billing data: 1) Visualize clients’ movement (service use) between levels of care over time. 2) Visualize each agency’s clients’ movement (service use) over time. 3) Visualize clients’ service use by demographic and clinical characteristics, including gender, age, ethnicity, and diagnosis. This visualization will allow system stakeholders to understand a) how clients are moving through the system (using services at different levels of care)b) whether / how this flow varies by provider within and across levels of care and c) whether / how this flow varies by client demographic characteristics. The delivered program will also allow for the upload of new data to inform the visualizations, and for the comparison of clients’ service utilization across two distinct periods of time. A procedure document will be included with the program and this document will provide step-by-step instructions that enable users to upload new data to the program. The program will be available to users wherever it is installed and service data is uploaded.
  • 69.
  • 70.
  • 73.
  • 78. Data Issues Client Primary RUs with no mapping in provider table1380 38GS01 38AOHA 38APON 38GSOP 38APPB 3822O2 38BG2 8949RP 38ALSD” 88127 3822T5 RUs in services with no mapping in provider table:38CW2 38A6238A6338A9238A9338AMLE38APQD38CD238CD338CK238CK338CT238CT338CU238CU338CV238CV338CW338DD238DD3896538965DT897538975DT898138982289823