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Nucleic acids
By
N.Santhosh Kumar
Asst.Professor
Department of Biochemistry
SIMS & RH
Nucleic acid are the polymers of nucleotides held by 3’ & 5’ phosphate
bridges.
Reserve bank of genetic information.
Maintaining the identity of different species of organisms over millions
of year.
Two Types:  DNA (Deoxy Ribonucleic Acid)
 RNA (Ribonucleic Acid)
DNA
(DEOXY RIBO NUCLEIC ACID)
4
Functions of DNA:
Responsible for the transmission of genetic information.
DNA forms the basis of Heredity.
Responsible for maintaining the identify of different species.
 All cellular function are under the control of DNA.
 DNA is organized into genes which is the fundamental unit of
genetic information.
 DNA is also found in the mitochondria and chloroplasts,
where they perform specific function with regard to protein synthesis.
 It was first isolated from pus cell & salmon sperm.
 Polymer of deoxyribonucleotides.
 Composed of monomeric units –dAMP, dGMP, dCMP & dTMP.
 They are held together by 3’,5’ phosphodiester bridges constituting a
single strand.
CHARGAFF’S RULE:
• DNA had equal numbers of A & T residues (A=T). & equal numbers of
G &C residues (G=C).
• The molar equivalence b/w the purines & Pyrimidines in DNA structure.
Purines = Pyrimidines
• Double helical structure of DNA derives its strength from Chargaff's rule
• Single stranded DNA & RNA which are usually do not obey Chargaff's
rule
James Watson Francis Crick
Nobel prize in 1962
Double helical structure of DNA in 1953.
SALIENT FEATURES
• Right handed double helix.
• Mol wt is 660 KD
• Consists of two poly deoxyribonucleotide strands.
• Twisted around each other on a common axis.
• Two strands are antiparallal I.e. 5’ to 3’ direction,
while the other in 3’ to 5’ direction
 The width of diameter - 2nm (20 A )
 Each turn of the helix -3.4nm (34 A ) with 10 BP of nucleotide
 Each pair placed at a distance –about 0.34 nm (3.4 A)
 Two polynucleotide chains are not identical but complementary to each
other due to base pairing.
 Two strands are held together by H-bonds to formed by complementary BP.
Hydrogen bonds in nucleic acids
A-T pair has 2 H-bonds (A=T)
G-C pair has 3 H-bonds (GC)
 H-bonds are formed b/w a purine & pyrimidine only.
 The double helix has (wide) major grooves &narrow is minor
grooves along the phosphodiester backbone.
 Proteins interact with DNA at these grooves .
DIFFERENT FORMS OF DNAs
B- forms (Watson & crick form)
Type of helix – right handed
Turn contains 10 BP
Distance - 3.4nm
Width – 2nm
Major groove – wide
Minor groove - Narrow
A –form of DNA:
Right handed helix.
11 BP pairs per turn.
Major groove –narrow.
Minor groove – very broad.
DIFFERENT FORMS OF DNAs
A –form of DNA:
 Right handed helix.
 11 BP pairs per turn.
 Major groove –narrow.
 Minor groove – very broad.
Z- forms of DNA:
 Left handed helix with12 BP per turn
 Major groove – flat
 Minor groove – very narrow
 Strands of DNA move in zig zag fashion
 Sign role – regulating gene expression
Parameters of Major DNA Helices
Parameters A Form B Form Z-Form
Direction of helical rotation Right Right Left
Residues per turn of helix 11 10 12 base pairs
Rotation of helix per residue
(in degrees)
33 36 -30
Base tilt relative to helix axis
(in degrees)
20 6 7
Major groove narrow & deep wide & deep Flat
Minor groove wide & shallow narrow & narrow and
Next PPT on
NA-03: Ribonucleic acid (RNA) & Its Functions
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NA-02: Deoxyribonucleic acid (DNA)

  • 2. Nucleic acid are the polymers of nucleotides held by 3’ & 5’ phosphate bridges. Reserve bank of genetic information. Maintaining the identity of different species of organisms over millions of year. Two Types:  DNA (Deoxy Ribonucleic Acid)  RNA (Ribonucleic Acid)
  • 4. 4 Functions of DNA: Responsible for the transmission of genetic information. DNA forms the basis of Heredity. Responsible for maintaining the identify of different species.  All cellular function are under the control of DNA.  DNA is organized into genes which is the fundamental unit of genetic information.  DNA is also found in the mitochondria and chloroplasts, where they perform specific function with regard to protein synthesis.
  • 5.  It was first isolated from pus cell & salmon sperm.  Polymer of deoxyribonucleotides.  Composed of monomeric units –dAMP, dGMP, dCMP & dTMP.  They are held together by 3’,5’ phosphodiester bridges constituting a single strand.
  • 6. CHARGAFF’S RULE: • DNA had equal numbers of A & T residues (A=T). & equal numbers of G &C residues (G=C). • The molar equivalence b/w the purines & Pyrimidines in DNA structure. Purines = Pyrimidines • Double helical structure of DNA derives its strength from Chargaff's rule • Single stranded DNA & RNA which are usually do not obey Chargaff's rule
  • 7. James Watson Francis Crick Nobel prize in 1962 Double helical structure of DNA in 1953.
  • 8. SALIENT FEATURES • Right handed double helix. • Mol wt is 660 KD • Consists of two poly deoxyribonucleotide strands. • Twisted around each other on a common axis. • Two strands are antiparallal I.e. 5’ to 3’ direction, while the other in 3’ to 5’ direction
  • 9.
  • 10.  The width of diameter - 2nm (20 A )  Each turn of the helix -3.4nm (34 A ) with 10 BP of nucleotide  Each pair placed at a distance –about 0.34 nm (3.4 A)  Two polynucleotide chains are not identical but complementary to each other due to base pairing.  Two strands are held together by H-bonds to formed by complementary BP.
  • 11. Hydrogen bonds in nucleic acids A-T pair has 2 H-bonds (A=T) G-C pair has 3 H-bonds (GC)
  • 12.  H-bonds are formed b/w a purine & pyrimidine only.  The double helix has (wide) major grooves &narrow is minor grooves along the phosphodiester backbone.  Proteins interact with DNA at these grooves .
  • 13. DIFFERENT FORMS OF DNAs B- forms (Watson & crick form) Type of helix – right handed Turn contains 10 BP Distance - 3.4nm Width – 2nm Major groove – wide Minor groove - Narrow A –form of DNA: Right handed helix. 11 BP pairs per turn. Major groove –narrow. Minor groove – very broad.
  • 14. DIFFERENT FORMS OF DNAs A –form of DNA:  Right handed helix.  11 BP pairs per turn.  Major groove –narrow.  Minor groove – very broad.
  • 15. Z- forms of DNA:  Left handed helix with12 BP per turn  Major groove – flat  Minor groove – very narrow  Strands of DNA move in zig zag fashion  Sign role – regulating gene expression
  • 16. Parameters of Major DNA Helices Parameters A Form B Form Z-Form Direction of helical rotation Right Right Left Residues per turn of helix 11 10 12 base pairs Rotation of helix per residue (in degrees) 33 36 -30 Base tilt relative to helix axis (in degrees) 20 6 7 Major groove narrow & deep wide & deep Flat Minor groove wide & shallow narrow & narrow and
  • 17. Next PPT on NA-03: Ribonucleic acid (RNA) & Its Functions
  • 18. No matter where you are in life, no matter what your situation. You can always do something. Thank Q