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GENETICS FOR THE
MRCOG PART 1
YAZID JIBREL
ROYAL MEDICAL SERVICES
•

Clinical genetics is a speciality concerned with
the investigating and diagnosis of patients of all
ages with disorders that may be inherited
AUTOSOMAL DOMINANT
1. Achondroplasia
2. Huntigton disease
3. Von willbrand disease
4. heridetry spherocytosis
5. marfan syndrome
6. neurofibromatosis type 1 and 2
7. retinoblastoma
AUTOSOMAL DOMINANT
1. Achondroplasia
2. Huntigton disease
3. Von willbrand disease
4. heridetry spherocytosis
5. marfan syndrome
6. neurofibromatosis type 1 and 2
7. retinoblastoma
AUTOSOMAL DOMINANT
1. Achondroplasia
2. Huntigton disease [CAG]
3. Von willbrand disease
4. heridetry spherocytosis
5. marfan syndrome
6. neurofibromatosis type 1 and 2
7. retinoblastoma
AUTOSOMAL DOMINANT
1. Achondroplasia
2. Huntigton disease
3. Von willbrand disease
4. heridetry spherocytosis
5. marfan syndrome
6. neurofibromatosis type 1 and 2
7. retinoblastoma
AUTOSOMAL DOMINANT
8. von hippel lendeau disease.
9. Adult polycystic kidney disease
10. breast cancer.
11. acute intermittent porpheryia.
12. MEN
13. familial hypercholestrolemia
14. familial polyposis coli (AKA familial adenomatous
polyposis).
AUTOSOMAL DOMINANT
8. von hippel lendeau disease.
9. Adult polycystic kidney disease
10. breast cancer.
11. acute intermittent porpheryia.
12. MEN
13. familial hypercholestrolemia
14. familial polyposis coli (AKA familial adenomatous
polyposis).
AUTOSOMAL DOMINANT
8. von hippel lendeau disease.
9. Adult polycystic kidney disease
10. breast cancer.
11. acute intermittent porpheryia.
12. MEN
13. familial hypercholestrolemia
14. familial polyposis coli (AKA familial adenomatous
polyposis).
AUTOSOMAL DOMINANT
15. AD deafness.
16. osteogenesis imperfecta.
17. Noonan’s syndrome.
18. myotonic dystrophy.
19. Tuberous sclerosis.
20. Ehler danlos syndrome.
21. heridetry hemorrhagic telagectasia (AKA oslerweber-rendau disease).
AUTOSOMAL RECESSIVE
1. Cystic fibrosis
2. Sickle cell disease
3. thalasemia
4. phenylketonuria (PKU)
5. Congenital adrenal hyperplasia
6. wilson’s disease.
7. Glycogen storage diseases.
AUTOSOMAL RECESSIVE
1. Cystic fibrosis
2. Sickle cell disease
3. thalasemia
4. phenylketonuria (PKU)
5. Congenital adrenal hyperplasia
6. wilson’s disease.
7. Glycogen storage diseases.
AUTOSOMAL RECESSIVE
1. Cystic fibrosis
2. Sickle cell disease
3. thalasemia
4. phenylketonuria (PKU)
5. Congenital adrenal hyperplasia
6. wilson’s disease.
7. Glycogen storage diseases.
AUTOSOMAL RECESSIVE
8. Tay sachs disease (AKA hexoaminidase A)
9. Gauchers disease.
10. homocystenuria
11. ataxia telangectasia
12. ARPKD (infantile PKD)
13. Albinism
14. hemochromatosis
AUTOSOMAL RECESSIVE
15. mucopolysacridosis (except hunter’s disease)
16. sphingolipidosis (except Fabry’s disease)
17. Usher syndrome
18. fredrich ataxia
19. spinal muscle atrophy
20. kartagner’s syndrome
21. wolfram’s syndrome
X-LINKED DOMINANT
•

we have 2 scenarios of inheritance:

1. the affected father
2. the affected mother

•

dominant = every generation (no skip
generation)

•

X-liked = no male to male transmission
X-LINKED DOMINANT
•

dominant = every generation (no skip generation)

•

X-liked = no male to male transmission

•

male and female offspring are equally affected
X-LINKED DOMINANT
•

examples:

1. Fragiles X Syndrome. [CGG]
2. Rett syndrome.
3. hypophosphatemic rickets (perviously vitamin D resistant
rickets)
4. incontinentia pigmenti.
5. Xg blood group.
codominanace inheritance
neither of the two allele are
dominant
X-LINKED RECESSIVE
1. Duchhennes muscular dystrophy
2. red green color blindness
3. G6PD
4. hemophilia (A, B, and C)
5. lesch-Nyhan syndrome (AKA HGPRT
deficiency)
6. ichthyosis
X-LINKED RECESSIVE
7. Alport syndrome
8. wiskott aldrich syndrome
9. hunter’s syndrome
10. menke’s disease
11. fabry’s disease
12. nephrogenic diabetes insipidus
MITOCHONDRIAL
INHERITANCE
1. mitochondrial myopathies
2. Leber’s hereditary optic neuropathy.
3. Leigh’s syndrome
TRINUCLEOTIDE REPEATS
Disease

Repeat

huntington disease

CAG

fragile X syndrome

CGG

Myotonic dystrophy

CTG

friedreich ataxia

GAA
ANEUPLOIDY
•

Aneuploidy, a deviation from the eupliod number,
represents the gain (+) or loss (-) of a specific
chromosome.

•

two major aneuploidies are observed:

1. monosomy (loss of chromosome).
2. trisomy (gain of chromosome)
DOWN SYNDROME
•
•

Trisomy 21

•

prevalance 1:700 live births

•

due to :

1. 1ry trisomy (nondysjunction) 95%
2. robertsonian translocation of
chromosome 14 : 21 (3%).
3. mosaicism (1%)

maternal age risk for down syndrome

1. 25 years old = 1 : 1500
2. 30 years old = 1: 900
3. 35 years old = 1:350
4. 40 years old = 1: 100
5. 45 years old = 1:30
6. 50 years old = 1:11
7. cut off for invasive screen 1:250
DOWN SYNDROME
1. increase risk for :
alzheimer disease
AML/ALL
hypothyroidism
2. raised nuchal translucency
EDWARD SYNDROME
•

Trisomy 18
•

increase nuchal translucency

•

musculoskeletal defect

•

facial defects

•

cardiac defects

1. 1 month = 30%

•

abdominal defects

2. 2 month = 50%

•

IUGR

•
•

•

male : female 1:2
UK prevalence 1:3000 live
birth
mortality rate:

3. 1 year = 90%
PATAU’S SYNDROME
•
•

•

•

trisomy 13

•

midline defects

incidence increase with
maternal age

•

post axial polydactyly

•

congenital heart defect

•

renal abnormality

•

omphalocele

•

IUGR

UK prevalence 1:5000 live
births
mortality rate 100% by 1
month age.
KLIENFILTER SYNDROME

•

47, XXY

•

incidence 1:1000 live birth
TURNER SYNDROME

•

45,X or 45,XO

•

intellectually normal

•

risk for gonadoblastoma
DELETION
microdeletion syndrome

chromosome affected

cri-du-chat

5

williams

7

angleman

15

prader-willi

15

smith magenis

17

Di-George

22
TRANSLOCATION
•

the exchange of 2 segments of chromosome between nonhomologous chromosomes

•

2 types:

1. balanced: an even exchange of material with no excess or loss
2. unbalanced: unequal exchange in genetic material

•

Robetsonian translocation result from fusion of the long arms
of 2 acrocentric chromosomes
TRANSLOCATION
TRANSLOCATION
IMPRINTING
•

Angelman 15q11-13

•

maternal deletion

1. happy disposition
2. macroglossia
3. ataxia
4. seizures
5. learning difficulty

•

Prader-Willi 15q11-13

•

paternal deletion

1. obese
2. hypogonadism
3. hypotonia
MULTIFACTORIAL
INHERITANCE
GENETIC

Tuberculosis

ENVIRONMENTAL

Phenylketonuria
Galactosaemia

Rare
Genetics simple
Unifactorial
High recurrence rate

Spina bifida
Ischaemic heart disease
Ankylosing spondylitis

Common
Genetics complex
Multifactorial
Low recurrence rate

•

DM
PreEclampsia

•

Club foot
Pyloric stenosis
Dislocation of hip

Duchenne
muscular dystrophy

Peptic ulcer
Diabetes

HTN

•

Haemophilia
Osteogenesis imperfecta

•

major NTD

•

congenital heart disease

•

cleft lip & palate.

•

Atopy

•

CDH

Scurvy
INVESTIGATIONS

•

Karyotyping (chromosomal analysis)

•

FISH (molecular cytogenetics)
GENETICS LINGO
•

There is an agreed format for the describing chromosomal
abnormalities and this forms the basis of reports from
cytogenitic laboratory.

•

example: 46,XY,t(2;3)(p21;q29)

•

translocation: t

•

deletions: der

•

duplication: dup
THANK YOU

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Genetics for mrcog part1

Notas del editor

  1. the defect is often in structural genes. no skip generation & + family history dominant = both male and female equally affected transmission of disease from either sex to either sex 1 parent is enough to give the disease. look for consanguinity. new mutations are common. inheritance 1:2 shows variable expression and incomplete penetrance
  2. achondroplasia: fibroblast growth factor (fgf) 3 receptor defect. result in dwarfism, short limbs, normal sized head and trunk usually with advanced paternal age
  3. Gene located on chromosome 4 trinucleotide repeat CAG symptoms manifest at old age between 20 - 50 example of anticipation in genetics findings: depression, prograssive demintia, choreform movements, caudate atrophy, decrease Ach and GABAin brain. In Huntington's disease, the HTT gene becomes elongated with a pathologically large number of C-A-G repeats, producing a protein consisting of large strings of glutamine called 'mutant-huntingtin'. Degradation products of this protein accelerate the breakdown of nerve cells in the basal ganglia and the cortex, producing the disease. The greater the number of repeats, the earlier the onset of the disease and the more affected an individual is.
  4. shperiod RBC due to spectrin and ankrin defect hemolytic anemia and increase MCHC and spleenomegally
  5. chromosome 16. 90% of cases are due to mutation in APKD 1 always bilateral, massive large cysts patients present with flank pain hematuria and renal failure accosiated with berry aneurysms, mitral valave prolapse
  6. BRCA stands for breast cancer susceptibility gene. the BRCA 1 gene is found on chromosome 17 BRCA 2 found on chromosome 13. both are tumor suppressor gene. mutations in each gene lead to defective form of the DNA repair protein, with the consequence of increased tumorigenesis
  7. deletion in chromosome 5 (APC gene) colon becomes covered with with adenomatous polyps after puberty. progress to colon CA unless resecteed
  8. rare multisystem genetic disease TSC1 gene -> hamartin chromosome 9 TSC2 gene -> tuberin chromosome 16 both tumor suppressor gene learning difficulties epilepsy cardiac rhabdomyomas renal angiomyolipomas brain abnormalities skin manifestations, ash-leaf spots, angiofibromas
  9. often due enzyme deficiency skip generations usually seen in only 1 generation the 2 parents must be carriers inheritence 1:4 affected 2:4 unaffected carriers 1:4 normal often manifest in childhood commonly more severe than dominant disease not possible to trace using family history
  10. disease of exocrine secretion increaes chloride in sweat carrier rate in caucasians 1:23 prevalence is 1:2000 mutation in CFTR gene on chromosome 7 most common mutation is f508 in 70 % disease hallmark is viscid mucus production recurrent chest infections, pancreatitis, cirrhosis, IO, opsteoporosis, diabetes, infertility due to congenital absent vas deferens thick cervical mucus
  11. causes by point mutation in Beta glob in chain in hemoglobin glutamic acid is replaced by valine prevelance in london 1: 500 two types homozygous and heterozygous loss of RBC elasticity and sickling it has many complications but in pregnancy can lead to miscarriage, FGR, pre eclamsia
  12. also called DIDMOAD (Diabetes Insipidus, Diabetes Mellitus, Optic Atrophy, and Deafness)
  13. often manifest very severely in males, frequently leading to spontaneous loss or neonatal death of affected male pregnancy. can transmit through both parents all daughters of the affected father are affected
  14. trinucleotide repeat CGG X-linked defect affecting the methylation and expression of the FMR1 Gene on X chromosome associated with chromosomal breakage. the 2nd most common cause of genetic mental retardation after down syndrome findings: macro-orchidism (large testes), long face with large jaws, large everted ears, autism and mitral valve prolapse.
  15. Blood groups are inherited from both parents. The ABO blood type is controlled by a single gene (the ABO gene) located on the 9 chromosome. codominance, which means that type A and B parents can have an AB child. A couple with type A and type B can also have a type O child if they are both heterozygous
  16. X-linked = no male to male transmission and commonly more sever in males. recessive = it skip generations Obligate carriers: mothers of all affected sons. daughter of all affected men inheretince 1:2 sons of every carrier female
  17. transmitted only through the mother both male and female is affected all offspring of the affected female are affected. disease are typically neuropathies and myopathies which requires more ATP and energy. sperms don’t contribute to the zygote beyond their nuclear DNA.
  18. all disease with trinucleotide repeats have anticipation in common Huntington's disease is an example of genetic anticipation, a phenomenon where the disease can be progressively worse with each generation that inherits it. This is due to an incompletely understood process where the male copy of the gene has its number of repeats amplified during replication.
  19. dysmorphic feature (small ears, up slanting palpebral fissures, flat facial profile, brachycephaly) single palmer crease, wide spaced big toe hypotonia conductive hearing loss cardiac abnormalities GIT abnormalities dudenal atrasia, imperforated anus, hirschprungs disease.
  20. musculoskeletal: limb defects, rockerbottom feet, overlapping fingers. facial: micrognathia, cleft lip, cleft palate cardiac defect: VSD, ASD, PDA adbomenal defect: exomphalos, inguinal hernia, diaphragmatic hernia, renal malformations
  21. midline defects: hypotelorism (abnormally decrease distance between eyes), holoprosencephaly (failure of the prosencephalon to develop into 2 hemispheres), cleft lip, cleft palate, scalp defects.
  22. testicular atrophy gynecomastia female distribution of hair low testosterone high FSH and LH (hypergonadotrophic hypogonadism) Tall high pitched voice
  23. short stature webbed neck wide carrying angle of arms wide shaped chest and wide spaced nipples edema in wrist and ankle in new born cystic hygroma in utero resulting in excess nuchal translucency 1ry amenorrhea coarctation of aorta infertility and gonadal dysgenesis renal anomalies include horse shoe kidney
  24. the concept of genomic imprinting suggests that in certain cases a genetic defect will only produce a phenotype if inherited from a particular parent.
  25. pyloric stenosis, cancer, epilepsy, Alzheimer, thyroid, psoriasis,others a number of common disorders appear to have pattern of inheritance which involve a combination of genetic factors, drugs, environment and termed multifactorial inheritance.
  26. Genoscopy: refers to different non-alleleic genotypes that result in similar phenotype. Heteroplasmy: presence of two or more different populations of mitochondria within a cell IncorrectIncorrect answer selected Isochromosome: refers to an abnormal chromosome created by deletion of one arm or duplication of the other arm. Syntheny: presence of genes on the same chromosome Autosome refers to non-sex (XY) chromosomes of which there are 22 pairs.
  27. the total number of chromosomes is given first i.e 46 the sex chromosomes are indicated next XY = for a male tranlocation is indicated by the letter ’t’ and is followed in parentheses by the number of chromosomes cornered with p or q so chromosome 2p21 swapped position with chromosome 3q29