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Caffe + H2O
Cyprien Noel
Context - me
● Distributed systems - trading, air control, neural nets
● Multi-GPU Caffe
● Caffe over InfiniBand in Spark
Now at UCB
● Caffe: python, help merge forks
● Project: how to generalize work above?
○ Help leverage devices, e.g. in H2O
○ New distributed Caffe, meta graph
Context - industry
Example
Problem
● DPDK
● Libfabric
● Accelio
● UCX
● PMEM
● More every week...
● GPUDirect
● NVM Express
● HMM
● CAPI
● CCIX
● HSA
● OFED
A single abstraction?
● Intra (device bus) vs inter-machine (networks)
○ E.g. CUDA copy and sockets
○ RDMA blurs local and remote devices
● Communication vs persistence
○ Sockets vs files is orthogonal to location
○ NVMe allows storage on remote disks
● Ephemeral vs durable
○ 3D XPoint & ReRAM are in-between RAM and SSD
○ Intel’s pmem exposes device directly as memory
Proposal
● An in-memory file system
○ Location transparent mmap
○ Transactional
Example - GPU kernel on data in storage
Today
BFS
● Client reads HDFS path
● HDFS client resolves worker
● Establishes connection
● Server accepts connection
● Authentication, authorization
● File system operation
● Network transfer
● CUDA transfer
data = mmap("/path")
gpu_kernel(data)
Example - Compute graph in hardware
/app/jpgs/*
/layers/*
/vars/* // Access DB
/redis db = redis.open("./redis")
● Everything is a file
○ Using mmap, named pipes, unix sockets
○ E.g. inputs jpgs, weights, activations, counters
● All state and coordination in fs
○ Minimal code, e.g. persistent GPU kernels
○ Location independent → dynamic placement
○ Arbitrary graph splitting, e.g. data & model parallel ML
Example - Caffe & H2O
● H2O can write to Caffe input layers
○ Data directly placed GPUs
○ RDMA atomic ops to count dependencies
● Can form pipelines
○ No need for pair wise integrations
○ Uniform monitoring, logging etc.
○ Leverage best device for each step
Benefits
● Performance
○ mmap lowest possible overhead
○ Leverages hardware, e.g. GPUDirect, RDMA, NVMe, atomic ops
● Complexity
○ Unified naming, permissioning, distributed state management
○ Hierarchical naming & location transparency → HA, placement
● Security
○ File permissions familiar & kernel level, other networking disabled
○ Mounting folder gives access to well defined resources / capabilities
Prototype
● Single master with meta data
● Distributed mmap (CPU)
● Embedded platform (X1)
● Ethernet, InfiniBand
Summary
● Caffe progress - multi-GPU in python, merge NV work
● Working on new programming model
○ “Unix philosophy for modern apps”
○ Helps leverage devices, e.g. in H2O
○ Simplifies apps integration & pipelines
○ Distributed version of Caffe first use case

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Caffe + H2O - By Cyprien noel

  • 2. Context - me ● Distributed systems - trading, air control, neural nets ● Multi-GPU Caffe ● Caffe over InfiniBand in Spark Now at UCB ● Caffe: python, help merge forks ● Project: how to generalize work above? ○ Help leverage devices, e.g. in H2O ○ New distributed Caffe, meta graph
  • 5. Problem ● DPDK ● Libfabric ● Accelio ● UCX ● PMEM ● More every week... ● GPUDirect ● NVM Express ● HMM ● CAPI ● CCIX ● HSA ● OFED
  • 6. A single abstraction? ● Intra (device bus) vs inter-machine (networks) ○ E.g. CUDA copy and sockets ○ RDMA blurs local and remote devices ● Communication vs persistence ○ Sockets vs files is orthogonal to location ○ NVMe allows storage on remote disks ● Ephemeral vs durable ○ 3D XPoint & ReRAM are in-between RAM and SSD ○ Intel’s pmem exposes device directly as memory
  • 7. Proposal ● An in-memory file system ○ Location transparent mmap ○ Transactional
  • 8. Example - GPU kernel on data in storage Today BFS ● Client reads HDFS path ● HDFS client resolves worker ● Establishes connection ● Server accepts connection ● Authentication, authorization ● File system operation ● Network transfer ● CUDA transfer data = mmap("/path") gpu_kernel(data)
  • 9. Example - Compute graph in hardware /app/jpgs/* /layers/* /vars/* // Access DB /redis db = redis.open("./redis") ● Everything is a file ○ Using mmap, named pipes, unix sockets ○ E.g. inputs jpgs, weights, activations, counters ● All state and coordination in fs ○ Minimal code, e.g. persistent GPU kernels ○ Location independent → dynamic placement ○ Arbitrary graph splitting, e.g. data & model parallel ML
  • 10. Example - Caffe & H2O ● H2O can write to Caffe input layers ○ Data directly placed GPUs ○ RDMA atomic ops to count dependencies ● Can form pipelines ○ No need for pair wise integrations ○ Uniform monitoring, logging etc. ○ Leverage best device for each step
  • 11. Benefits ● Performance ○ mmap lowest possible overhead ○ Leverages hardware, e.g. GPUDirect, RDMA, NVMe, atomic ops ● Complexity ○ Unified naming, permissioning, distributed state management ○ Hierarchical naming & location transparency → HA, placement ● Security ○ File permissions familiar & kernel level, other networking disabled ○ Mounting folder gives access to well defined resources / capabilities
  • 12. Prototype ● Single master with meta data ● Distributed mmap (CPU) ● Embedded platform (X1) ● Ethernet, InfiniBand
  • 13. Summary ● Caffe progress - multi-GPU in python, merge NV work ● Working on new programming model ○ “Unix philosophy for modern apps” ○ Helps leverage devices, e.g. in H2O ○ Simplifies apps integration & pipelines ○ Distributed version of Caffe first use case