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Immune Chemistry & Immunology 
Gandham. Rajeev
Immunology 
 Immunology deals with the study of 
immunity & immune systems of vertebrates. 
 Immunity (immunis = exempt/free from 
burden) 
 It involves the resistance shown & protection 
offered by the host organism against the 
infectious diseases.
 The immune system consists of a complex 
network of cells & molecules & their 
interactions. 
 It is specifically designed to eliminate 
infectious organisms from the body. 
 This is possible since the organism is capable 
of distinguishing the self from non-self, and 
eliminate non-self. 
 Two types-innate & adaptive or acquired.
Antigens 
 Certain components of the cell membranes 
act as specific antigens. 
 They will be different from person to 
person in their chemical composition and 
three dimensional structure. 
 The immuno-competent cells could 
recognise the self from nonself.
 Any substance which invokes an 
immunological response is an antigen or 
immunogen. 
 Antibody response will usually be selective 
against specific spatial configurations on the 
antigen, which are called antigenic 
determinant sites, known as epitopes.
Immune response 
 T - lymphocytes: 
 The lymphocytes generated from the bone 
marrow, passed through & processed by the 
thymus gland, are then called T 
lymphocytes. 
 They can directly kill the target cells & are 
the effector cells for the cell-mediated 
immunity (CMI).
 The T lymphocytes are found mainly in the 
paracortical areas of lymph nodes & 
periarteriolar sheaths in the spleen. 
 T-cells can identify viruses & microorganisms 
from the antigens displayed on their surfaces. 
 In peripheral blood 80% lymphocytes are T cells 
& 15% are B cells.
Types of T-cells 
 Inducer T-cells: 
 Mediate the development of T-cells in the thymus. 
 Cytotoxic T-cells (TC): Capable of recognizing & 
killing the infected or abnormal cells. 
 Helper T-cells (TH): Initiate immune responses. 
 Suppressor T-cells: Mediate the suppression of 
immune response. 
 T-lymphocytes are effector cells for the cell-mediated 
immunity (CMI)
B-lymphocytes 
 The site of development and maturation of 
B-cells occurs in bursa fabricius in birds, and 
bone marrow in mammals. 
 During the course of immune response, B-cells 
mature into plasma cells and secrete 
antibodies (immunoglobulins). 
 The B cells govern the humoral immunity.
 The B-cells possess the capability to 
specifically recognize each antigen and 
produce antibodies (i.e. immunoglobulins) 
against it. 
 B-lymphocytes are intimately associated 
with humoral immunity.
Immunoglobulins 
 lmmunoglobulins, a specialised group of proteins. 
 Associated with γ-globulin fraction (on 
electrophoresis) of plasma proteins. 
 Some immunoglobulins, separate along with β & α- 
globulins. 
 So γ-globulin & immunoglobulin are not 
synonymous. 
 lmmunoglobulin is a functional term while γ-globulin 
is a physical term.
Structure of immunoglobulins 
 All the immunoglobulin (Ig) molecules 
basically consist of 2 identical heavy (H) 
chains (mol. wt. 53,000 to 75,000 each) & 2 
identical light (L) chains (mol. wt. 23,000 each) 
 Held together by disulfide linkages & non-covalent 
interactions. 
 Immunoglobulin is a Y-shaped tetramer 
(H2L2).
 Each heavy chain contains approximately 
450 amino acids 
 Each light chain contains approximately 212 
amino acids. 
 The heavy chains of Ig are linked to 
carbohydrates, hence immunoglobulins are 
glycoproteins.
Constant and variable regions 
 Each chain (L or H) of lg has two regions 
(domains), 
 Constant & variable. 
 The amino terminal half of the light chain is 
the variable region (VL) while the carboxy 
terminal half is the constant region (CL).
 Heavy chain, approximately one-quarter of 
the amino terminal region is variable (VH) 
while the remaining three quarters is 
constant (CH1,, CH2, CH3). 
 The amino acid sequence (with its tertiary 
structure) of variable regions of light & heavy 
chains is responsible for the specific binding 
of immunoglobulin (antibody) with antigen.
Fab and Fc Portions 
 Papain (proteolytic enzyme from papaya) 
cleaves the lg. 
 Two Fab (fraction antibody) portions & one 
Fc (fraction crystallizable) portion are 
produced. 
 The antigen binding part of the antibody is 
in the Fab fragment.
 The cleavage takes place in the hinge 
region, where lg molecule can have 
mobility in 3 dimensional space, so as to 
adjust for tight grip on the antigen. 
 Carbohydrate groups of the lg molecule are 
also situated in the hinge region. 
 The area capable of complement binding 
lies in the Fc portion.
 Pepsin cleaves lg at another site so as to 
yield F(ab)2, where 2 Fab portions are 
combined together. 
 Fab part can combine with antigen very 
weakly, but combination with F(ab)2 is 
stronger.
Classes of Immunoglobulins 
 Immunoglobulin-G (lgG) is made up of 
heavy chain γ (gamma) 
 lgM has μ (mu) heavy chain 
 lgA has α (alpha) heavy chain 
 lgD contains δ (delta) 
 lgE heavy chain is called ε (epsilon).
 The light chains are two types either κ 
(kappa) or λ (lambda) in all the classes. 
 An Ig (of any class) contains 2κ or 2λ light 
chains & never a mixture. 
 E.g: lgG may consist of either γ2 κ2 or γ2 λ2. 
 In human beings, 60% light chains are of κ 
variety and 40% are of λ type.
Immunoglobulin G (IgG) 
 lgG contains 2 heavy chains & 2 light chains; 
 Heavy chains being of gamma type. 
 IgG is the most abundant (75-80%) class of 
immunoglobulins. 
 IgG is composed of a single Y-shaped unit 
(monomer). 
 It can pass from vascular compartment to 
interstitial space.
 It can cross-placental barrier & protects the 
newborn child from infections. 
 IgG is the only immunoglobulin that can 
cross the placenta and transfer the 
mother's immunity to the developing fetus. 
 IgG triggers foreign cell destruction 
mediated by complement system.
Immunoglobulin A (IgA) 
 IgA usually are dimers (total 4 heavy chains 
and 4 light chains). 
 The J chain connects the dimers. 
 They are the secretory antibodies seen in 
secretions of gastrointestinal tract, 
nasopharyngeal tract, urogenital tract, tears, 
saliva, sweat, milk, etc.
 Ig A is the most predominant antibody in 
the colostrum, the initial secretion from the 
mother's breast after a baby is born. 
 The IgA molecules bind with bacterial 
antigens present on the body (outer 
epithelial) surfaces & remove them. 
 IgA prevents the foreign substances from 
entering the body cells.
Immunoglobulin M (IgM) 
 lgM is the largest immunoglobulin 
composed of 5 Y-shaped units 
 IgM is a pentamer. 
 Five subunits, each having 4 peptide chains 
(total 10 heavy chains & 10 light chains) are 
joined together by a J-chain polypeptide.
 It can combine with 5 antigenic sites due to 
its pentameric structure. 
 Due to its large size, IgM cannot traverse 
blood vessels, restricted to the blood 
stream. 
 IgM is the first antibody to be produced in 
response to an antigen & is the most 
effective against invading microorganisms
Immunoglobulin D (IgD) 
 IgD is composed of a single Y-shaped unit 
& is present in a low concentration in the 
circulation. 
 IgD molecules are present on the surface 
of B cells. 
 IgD may function as B-cell receptor.
lmmunoglobulin E (IgE) 
 IgE is a singleY- shaped monomer. 
 It is normally present in minute concentration 
in blood. 
 IgE levels are elevated in allergic conditions 
as it is associated with the body's allergic 
response. 
 IgE molecules tightly bind with mast cells 
which release histamine & cause allergy.
 IgG, IgE and IgD have one basic unit each. 
 Ig M has 5 basic units and IgA has 2 basic units. 
Red circles represent J pieces. 
 Green squares are secretory pieces
Production of Igs by multiple genes 
 Igs are composed of light & heavy chains. 
 Each light chain is produced by 3 separate 
genes, 
 Variable region (VL) gene. 
 Constant region (CL) gene 
 Joining region (J) gene.
 Each heavy chain is produced by at least 4 
different genes 
 Variable region (VH) gene 
 Constant region (CH) gene 
 Joining region (J) gene 
 Diversity region (D) gene. 
 Multiple genes are responsible for the 
synthesis of any one of the immunoglobulin.
Multiple myeloma 
 Multiple myeloma, a plasma cell cancer, 
constitutes about 1% of all cancers affecting 
the population. 
 Females are more susceptible 
 It usually occurs in the age group 45-60 years.
Abnormal lg production 
 Multiple myeloma is due to the 
malignancy of a single clone of plasma 
cells in the bone marrow. 
 This results in the overproduction of 
abnormal immunoglobulins, mostly (75%) 
IgG & in some cases (25%) IgA or IgM.
 IgD type multiple myeloma found in 
younger adults is less common (<2%) but 
more sever. 
 In patients of multiple myeloma, the 
synthesis of normal immunoglobulins is 
diminished causing depressed immunity. 
 Hence recurrent infections are common in 
these patients.
Electrophoretic pattern 
 There is a sharp & distinct band (M band, 
for myeloma globulin) between β- & γ- 
globulins. 
 This M band almost replaces the γ -globulin 
band due to the diminished synthesis of 
normal γ –globulins.
Bence Jones proteins 
 These are the light chains (κ or λ) of Igs that 
are synthesized in excess. 
 Bence Jones proteins have a molecular 
weight of 20,000 or 40,000 (for dimer). 
 About 20% of the patients of multiple 
myeloma, Bence jones proteins are 
excreted in urine which often damages the 
renal tubules.
Amyloidosis 
 Amyloidosis is characterized by the 
deposits of light chain fragments in the 
tissue (liver, kidney, intestine) of multiple 
myeloma patients.
Detection of Bence Jones Proteins in urine 
 Electrophoresis of a concentrated urine is the 
best test to detect Bence Jones proteins in 
urine. 
 Bradshaw's test: 
 It involves layering of urine on concentrated 
HCI that forms a white ring of precipitate, if 
Bence Jones proteins are present
 The classical heat test involves the 
precipitation of Bence Jones proteins when 
slightly acidified urine is heated to 40-50°C. 
 This precipitate redissolves on further 
heating of urine to boiling point. 
 It reappears again on cooling urine to about 
70°C
References 
 Text book of Biochemistry – DM Vasudevan 
 Text book of Biochemistry – U Satyanarayana 
 Text book of Biochemistry – MN Chatterjea
Thank you

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IMMUNOLOGY

  • 1.
  • 2. Immune Chemistry & Immunology Gandham. Rajeev
  • 3. Immunology  Immunology deals with the study of immunity & immune systems of vertebrates.  Immunity (immunis = exempt/free from burden)  It involves the resistance shown & protection offered by the host organism against the infectious diseases.
  • 4.  The immune system consists of a complex network of cells & molecules & their interactions.  It is specifically designed to eliminate infectious organisms from the body.  This is possible since the organism is capable of distinguishing the self from non-self, and eliminate non-self.  Two types-innate & adaptive or acquired.
  • 5. Antigens  Certain components of the cell membranes act as specific antigens.  They will be different from person to person in their chemical composition and three dimensional structure.  The immuno-competent cells could recognise the self from nonself.
  • 6.  Any substance which invokes an immunological response is an antigen or immunogen.  Antibody response will usually be selective against specific spatial configurations on the antigen, which are called antigenic determinant sites, known as epitopes.
  • 7. Immune response  T - lymphocytes:  The lymphocytes generated from the bone marrow, passed through & processed by the thymus gland, are then called T lymphocytes.  They can directly kill the target cells & are the effector cells for the cell-mediated immunity (CMI).
  • 8.  The T lymphocytes are found mainly in the paracortical areas of lymph nodes & periarteriolar sheaths in the spleen.  T-cells can identify viruses & microorganisms from the antigens displayed on their surfaces.  In peripheral blood 80% lymphocytes are T cells & 15% are B cells.
  • 9. Types of T-cells  Inducer T-cells:  Mediate the development of T-cells in the thymus.  Cytotoxic T-cells (TC): Capable of recognizing & killing the infected or abnormal cells.  Helper T-cells (TH): Initiate immune responses.  Suppressor T-cells: Mediate the suppression of immune response.  T-lymphocytes are effector cells for the cell-mediated immunity (CMI)
  • 10. B-lymphocytes  The site of development and maturation of B-cells occurs in bursa fabricius in birds, and bone marrow in mammals.  During the course of immune response, B-cells mature into plasma cells and secrete antibodies (immunoglobulins).  The B cells govern the humoral immunity.
  • 11.  The B-cells possess the capability to specifically recognize each antigen and produce antibodies (i.e. immunoglobulins) against it.  B-lymphocytes are intimately associated with humoral immunity.
  • 12. Immunoglobulins  lmmunoglobulins, a specialised group of proteins.  Associated with γ-globulin fraction (on electrophoresis) of plasma proteins.  Some immunoglobulins, separate along with β & α- globulins.  So γ-globulin & immunoglobulin are not synonymous.  lmmunoglobulin is a functional term while γ-globulin is a physical term.
  • 13. Structure of immunoglobulins  All the immunoglobulin (Ig) molecules basically consist of 2 identical heavy (H) chains (mol. wt. 53,000 to 75,000 each) & 2 identical light (L) chains (mol. wt. 23,000 each)  Held together by disulfide linkages & non-covalent interactions.  Immunoglobulin is a Y-shaped tetramer (H2L2).
  • 14.  Each heavy chain contains approximately 450 amino acids  Each light chain contains approximately 212 amino acids.  The heavy chains of Ig are linked to carbohydrates, hence immunoglobulins are glycoproteins.
  • 15.
  • 16. Constant and variable regions  Each chain (L or H) of lg has two regions (domains),  Constant & variable.  The amino terminal half of the light chain is the variable region (VL) while the carboxy terminal half is the constant region (CL).
  • 17.  Heavy chain, approximately one-quarter of the amino terminal region is variable (VH) while the remaining three quarters is constant (CH1,, CH2, CH3).  The amino acid sequence (with its tertiary structure) of variable regions of light & heavy chains is responsible for the specific binding of immunoglobulin (antibody) with antigen.
  • 18. Fab and Fc Portions  Papain (proteolytic enzyme from papaya) cleaves the lg.  Two Fab (fraction antibody) portions & one Fc (fraction crystallizable) portion are produced.  The antigen binding part of the antibody is in the Fab fragment.
  • 19.  The cleavage takes place in the hinge region, where lg molecule can have mobility in 3 dimensional space, so as to adjust for tight grip on the antigen.  Carbohydrate groups of the lg molecule are also situated in the hinge region.  The area capable of complement binding lies in the Fc portion.
  • 20.  Pepsin cleaves lg at another site so as to yield F(ab)2, where 2 Fab portions are combined together.  Fab part can combine with antigen very weakly, but combination with F(ab)2 is stronger.
  • 21.
  • 22. Classes of Immunoglobulins  Immunoglobulin-G (lgG) is made up of heavy chain γ (gamma)  lgM has μ (mu) heavy chain  lgA has α (alpha) heavy chain  lgD contains δ (delta)  lgE heavy chain is called ε (epsilon).
  • 23.  The light chains are two types either κ (kappa) or λ (lambda) in all the classes.  An Ig (of any class) contains 2κ or 2λ light chains & never a mixture.  E.g: lgG may consist of either γ2 κ2 or γ2 λ2.  In human beings, 60% light chains are of κ variety and 40% are of λ type.
  • 24. Immunoglobulin G (IgG)  lgG contains 2 heavy chains & 2 light chains;  Heavy chains being of gamma type.  IgG is the most abundant (75-80%) class of immunoglobulins.  IgG is composed of a single Y-shaped unit (monomer).  It can pass from vascular compartment to interstitial space.
  • 25.  It can cross-placental barrier & protects the newborn child from infections.  IgG is the only immunoglobulin that can cross the placenta and transfer the mother's immunity to the developing fetus.  IgG triggers foreign cell destruction mediated by complement system.
  • 26. Immunoglobulin A (IgA)  IgA usually are dimers (total 4 heavy chains and 4 light chains).  The J chain connects the dimers.  They are the secretory antibodies seen in secretions of gastrointestinal tract, nasopharyngeal tract, urogenital tract, tears, saliva, sweat, milk, etc.
  • 27.  Ig A is the most predominant antibody in the colostrum, the initial secretion from the mother's breast after a baby is born.  The IgA molecules bind with bacterial antigens present on the body (outer epithelial) surfaces & remove them.  IgA prevents the foreign substances from entering the body cells.
  • 28. Immunoglobulin M (IgM)  lgM is the largest immunoglobulin composed of 5 Y-shaped units  IgM is a pentamer.  Five subunits, each having 4 peptide chains (total 10 heavy chains & 10 light chains) are joined together by a J-chain polypeptide.
  • 29.  It can combine with 5 antigenic sites due to its pentameric structure.  Due to its large size, IgM cannot traverse blood vessels, restricted to the blood stream.  IgM is the first antibody to be produced in response to an antigen & is the most effective against invading microorganisms
  • 30. Immunoglobulin D (IgD)  IgD is composed of a single Y-shaped unit & is present in a low concentration in the circulation.  IgD molecules are present on the surface of B cells.  IgD may function as B-cell receptor.
  • 31. lmmunoglobulin E (IgE)  IgE is a singleY- shaped monomer.  It is normally present in minute concentration in blood.  IgE levels are elevated in allergic conditions as it is associated with the body's allergic response.  IgE molecules tightly bind with mast cells which release histamine & cause allergy.
  • 32.  IgG, IgE and IgD have one basic unit each.  Ig M has 5 basic units and IgA has 2 basic units. Red circles represent J pieces.  Green squares are secretory pieces
  • 33. Production of Igs by multiple genes  Igs are composed of light & heavy chains.  Each light chain is produced by 3 separate genes,  Variable region (VL) gene.  Constant region (CL) gene  Joining region (J) gene.
  • 34.  Each heavy chain is produced by at least 4 different genes  Variable region (VH) gene  Constant region (CH) gene  Joining region (J) gene  Diversity region (D) gene.  Multiple genes are responsible for the synthesis of any one of the immunoglobulin.
  • 35. Multiple myeloma  Multiple myeloma, a plasma cell cancer, constitutes about 1% of all cancers affecting the population.  Females are more susceptible  It usually occurs in the age group 45-60 years.
  • 36. Abnormal lg production  Multiple myeloma is due to the malignancy of a single clone of plasma cells in the bone marrow.  This results in the overproduction of abnormal immunoglobulins, mostly (75%) IgG & in some cases (25%) IgA or IgM.
  • 37.  IgD type multiple myeloma found in younger adults is less common (<2%) but more sever.  In patients of multiple myeloma, the synthesis of normal immunoglobulins is diminished causing depressed immunity.  Hence recurrent infections are common in these patients.
  • 38. Electrophoretic pattern  There is a sharp & distinct band (M band, for myeloma globulin) between β- & γ- globulins.  This M band almost replaces the γ -globulin band due to the diminished synthesis of normal γ –globulins.
  • 39. Bence Jones proteins  These are the light chains (κ or λ) of Igs that are synthesized in excess.  Bence Jones proteins have a molecular weight of 20,000 or 40,000 (for dimer).  About 20% of the patients of multiple myeloma, Bence jones proteins are excreted in urine which often damages the renal tubules.
  • 40. Amyloidosis  Amyloidosis is characterized by the deposits of light chain fragments in the tissue (liver, kidney, intestine) of multiple myeloma patients.
  • 41. Detection of Bence Jones Proteins in urine  Electrophoresis of a concentrated urine is the best test to detect Bence Jones proteins in urine.  Bradshaw's test:  It involves layering of urine on concentrated HCI that forms a white ring of precipitate, if Bence Jones proteins are present
  • 42.  The classical heat test involves the precipitation of Bence Jones proteins when slightly acidified urine is heated to 40-50°C.  This precipitate redissolves on further heating of urine to boiling point.  It reappears again on cooling urine to about 70°C
  • 43. References  Text book of Biochemistry – DM Vasudevan  Text book of Biochemistry – U Satyanarayana  Text book of Biochemistry – MN Chatterjea