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Introduction to DataCite services
Jan Brase,
DataCite
4th DataCite summer meeting
Washington DC, September 19th 2013
1. Technische Informationsbibliothek (TIB)
2. Canada Institute for Scientific and Technical Information (CISTI),
3. California Digital Library, USA
4. Purdue University, USA
5. Office of Scientific and Technical
Information (OSTI), USA
6. Library of TU Delft,
The Netherlands
7. Technical Information
Center of Denmark
8. The British Library
9. ZB Med, Germany
10. ZBW, Germany
11. Gesis, Germany
12. Library of ETH Zürich
13. L’Institut de l’Information Scientifique
et Technique (INIST), France
14. Swedish National Data Service (SND)
15. Australian National Data Service (ANDS)
16. Conferenza dei Rettori delle Università Italiane (CRUI)
17. National Research Council of Thailand (NRCT)
DataCite members
Affiliated members:
1. Digital Curation Center (UK)
2. Microsoft Research
3. Interuniversity Consortium for Political and Social
Research (ICPSR)
4. Korea Institute of Science and Technology
Information (KISTI)
5. Bejiing Genomic Institute (BGI)
6. IEEE
7. Harvard University Library
I RD
( grav / 10 cm 3)
San d
( %)
C aC O3
( %)
T OC
( %)
Rad i o
( %/ s and)
Smect
( %/clay )
I RD
( grav / 10 cm 3)
San d
( %)
C aC O3
( % )
T OC
( %)
Radi o
( %/ s and)
Sme ct
( %/clay )
I RD
( grav / 10 cm 3)
Sand
( %)
C aC O 3
( %)
T OC
( % )
Rad i o
( %/s and)
Sm ect
( % /clay )
I RD
( grav / 10 cm 3)
Sand
( %)
C aC O3
( %)
T O C
( %)
R adi o
( %/s and)
Smect
( %/clay )
I RD
( grav / 10 cm 3)
Sand
( %)
C aC O3
( %)
TO C
( %)
Radi o
( %/s and)
Sme ct
( %/c lay )
PS1 389- 3 P S139 0-3 PS1431-1 PS1640- 1 P S164 8-1
Age (kyr) max. : 233.55 kyr PS1389-3ff
0.0
100.0
200.0
0 20 0 100 0 15 0 0.5 0 5 0 0 10 0 0 20 0 100 0 15 0 0.5 0 50 0 100 0 20 0 100 0 15 0 0.5 0 50 0 100 0 20 0 10 0 0 15 0 0.5 0 50 0 100 0 20 0 100 0 15 0 0.5 0 50 0 100
54° 0' 54°0'
54°30' 54°30'
55° 0' 55°0'
55°30' 55°30'
11°
11°
12°
12°
13°
13°
14°
14°
15°
15°
World vector shore line
Grain size class KOLP A
Grain size class KOEHN2
Grain size class KOEHN
Geochemistry
Grain size class KOLP B
Grain size class KOLP DIN
20 m
Scale: 1:2695194 at Latitude 0°
Source: Baltic Sea Research Institute, Warnemünde.
Earth quake events =>
doi:10.1594/GFZ.GEOFON.gfz2009kciu
Climate models => doi:10.1594/WDCC/dphase_mpeps
Sea bed photos => doi:10.1594/PANGAEA.757741
Distributes samples => doi:10.1594/PANGAEA.51749
Medical case studies =>
doi:10.1594/eaacinet2007/CR/5-270407
Computational model => doi:10.4225/02/4E9F69C011BC8
Audio record => doi:10.1594/PANGAEA.339110
Grey Literature => doi:10.2314/GBV:489185967
Videos => doi:10.3207/2959859860
What type of data are we talking about?
Anything that is the foundation
of further reserach
is research data
Data is evidence
Over 2,00,000 DOI names registered so far
DataCite Metadata schema published (in cooperation with
all members) http://schema.datacite.org
DataCite MetadataStore
http://search.datacite.org
DataCite in 2013
DataCite search
Searchterm: *
Searchterm: uploaded:[NOW-7DAY TO NOW]
Searchterm: relatedIdentifier:*
Searchterm
: relatedIdentifier:issupplementto:10.1029*
Searchterm:relatedIdentifier:*:10.1055*
DataCite search
Searchterm: *
Searchterm: uploaded:[NOW-7DAY TO NOW]
Searchterm: relatedIdentifier:*
Searchterm:
relatedIdentifier:issupplementto:10.1029*
Searchterm:relatedIdentifier:*:10.1055*
OAI and Statistics
OAI Harvester
http://oai.datacite.org
DataCite statistics (resolution and registration)
http://stats.datacite.org
DataCite Content Service
Service for displaying DataCite metadata
Different formats (BibTeX, RIS, RDF, etc.)
Content Negotation (through MIME-Typ)
• Access through DOI proxy (http://dx.doi.org)
• First implemented by CNRI and CrossRef:
Documentation:
http://www.crosscite.org/cn/
Content negotiation
Optimized for m2m communication using the accept header
of the http protocol
curl -L -H "Accept: MIME_TYPE" http://dx.doi.org/DOI
Try a shortcut out in any webbrowser:
http://data.datacite.org/MIME_TYPE/DOI
http://data.crossref.org/DOI
Resolving to the citation
http://data.datacite.org/application/x-datacite+text/10.5524/10000
Li, j; Zhang, G; Lambert, D; Wang, J (2011): Genomic data
from Emperor penguin. GigaScience.
http://dx.doi.org/10.5524/100005
Resolving to the RDF metadata
http://data.datacite.org/application/rdf+xml/10.5524/100005
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:j.0="http://purl.org/dc/terms/" > <rdf:Description
rdf:about="http://dx.doi.org/10.5524/100005">
<j.0:identifier>10.5524/100005</j.0:identifier> <j.0:creator>Li,
J</j.0:creator> <j.0:creator>Zhang, G</j.0:creator>
<j.0:creator>Wang, J</j.0:creator>
<owl:sameAs>doi:10.5524/100005</owl:sameAs>
<owl:sameAs>info:doi/10.5524/100005</owl:sameAs>
<j.0:publisher>GigaScience</j.0:publisher> <j.0:creator>Lambert,
D</j.0:creator> <j.0:date>2011</j.0:date> <j.0:title>Genomic
data from the Emperor penguin (Aptenodytes forsteri)</j.0:title>
</rdf:Description></rdf:RDF>
Example of use
This allows persistent identification of RDF
statements!
Implemented for all over 45 million CrossRef and
DataCite DOI names
Example of use:
DOI Citation Formatter
http://www.crosscite.org/citeproc/
ODIN Project
ORCID and DataCite Interoperability
Network (http://odin-project.eu/ )
http://datacite.labs.orcid-eu.org/
Use your ORCID to claim your products
from the DataCite store
2012: STM, CrossRef and DataCite Joint
Statement
1. To improve the availability and findability of research data,
the signers encourage authors of research papers to
deposit researcher validated data in trustworthy
and reliable Data Archives.
2. The Signers encourage Data Archives to enable bi-
directional linking between datasets and
publications by using established and community endorsed
unique persistent identifiers such as database accession
codes and DOI's.
3. The Signers encourage publishers and data archives to make
visible or increase visibility of these links from
publications to datasets and vice versa
22
Example
The dataset:
Storz, D et al. (2009):
Planktic foraminiferal flux and faunal composition of sediment trap
L1_K276 in the northeastern Atlantic.
http://dx.doi.org/10.1594/PANGAEA.724325
Is supplement to the article:
Storz, David; Schulz, Hartmut; Waniek, Joanna J; Schulz-Bull, Detlef;
Kucera, Michal (2009): Seasonal and interannual variability of the
planktic foraminiferal flux in the vicinity of the Azores Current.
Deep-Sea Research Part I-Oceanographic Research Papers, 56(1),
107-124,
http://dx.doi.org/10.1016/j.dsr.2008.08.009
Thank you!

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2013 DataCite Summer Meeting - Introducing DataCite services (Jan Brase - DataCite)

  • 1. Introduction to DataCite services Jan Brase, DataCite 4th DataCite summer meeting Washington DC, September 19th 2013
  • 2. 1. Technische Informationsbibliothek (TIB) 2. Canada Institute for Scientific and Technical Information (CISTI), 3. California Digital Library, USA 4. Purdue University, USA 5. Office of Scientific and Technical Information (OSTI), USA 6. Library of TU Delft, The Netherlands 7. Technical Information Center of Denmark 8. The British Library 9. ZB Med, Germany 10. ZBW, Germany 11. Gesis, Germany 12. Library of ETH Zürich 13. L’Institut de l’Information Scientifique et Technique (INIST), France 14. Swedish National Data Service (SND) 15. Australian National Data Service (ANDS) 16. Conferenza dei Rettori delle Università Italiane (CRUI) 17. National Research Council of Thailand (NRCT) DataCite members Affiliated members: 1. Digital Curation Center (UK) 2. Microsoft Research 3. Interuniversity Consortium for Political and Social Research (ICPSR) 4. Korea Institute of Science and Technology Information (KISTI) 5. Bejiing Genomic Institute (BGI) 6. IEEE 7. Harvard University Library
  • 3. I RD ( grav / 10 cm 3) San d ( %) C aC O3 ( %) T OC ( %) Rad i o ( %/ s and) Smect ( %/clay ) I RD ( grav / 10 cm 3) San d ( %) C aC O3 ( % ) T OC ( %) Radi o ( %/ s and) Sme ct ( %/clay ) I RD ( grav / 10 cm 3) Sand ( %) C aC O 3 ( %) T OC ( % ) Rad i o ( %/s and) Sm ect ( % /clay ) I RD ( grav / 10 cm 3) Sand ( %) C aC O3 ( %) T O C ( %) R adi o ( %/s and) Smect ( %/clay ) I RD ( grav / 10 cm 3) Sand ( %) C aC O3 ( %) TO C ( %) Radi o ( %/s and) Sme ct ( %/c lay ) PS1 389- 3 P S139 0-3 PS1431-1 PS1640- 1 P S164 8-1 Age (kyr) max. : 233.55 kyr PS1389-3ff 0.0 100.0 200.0 0 20 0 100 0 15 0 0.5 0 5 0 0 10 0 0 20 0 100 0 15 0 0.5 0 50 0 100 0 20 0 100 0 15 0 0.5 0 50 0 100 0 20 0 10 0 0 15 0 0.5 0 50 0 100 0 20 0 100 0 15 0 0.5 0 50 0 100 54° 0' 54°0' 54°30' 54°30' 55° 0' 55°0' 55°30' 55°30' 11° 11° 12° 12° 13° 13° 14° 14° 15° 15° World vector shore line Grain size class KOLP A Grain size class KOEHN2 Grain size class KOEHN Geochemistry Grain size class KOLP B Grain size class KOLP DIN 20 m Scale: 1:2695194 at Latitude 0° Source: Baltic Sea Research Institute, Warnemünde. Earth quake events => doi:10.1594/GFZ.GEOFON.gfz2009kciu Climate models => doi:10.1594/WDCC/dphase_mpeps Sea bed photos => doi:10.1594/PANGAEA.757741 Distributes samples => doi:10.1594/PANGAEA.51749 Medical case studies => doi:10.1594/eaacinet2007/CR/5-270407 Computational model => doi:10.4225/02/4E9F69C011BC8 Audio record => doi:10.1594/PANGAEA.339110 Grey Literature => doi:10.2314/GBV:489185967 Videos => doi:10.3207/2959859860 What type of data are we talking about? Anything that is the foundation of further reserach is research data Data is evidence
  • 4. Over 2,00,000 DOI names registered so far DataCite Metadata schema published (in cooperation with all members) http://schema.datacite.org DataCite MetadataStore http://search.datacite.org DataCite in 2013
  • 5. DataCite search Searchterm: * Searchterm: uploaded:[NOW-7DAY TO NOW] Searchterm: relatedIdentifier:* Searchterm : relatedIdentifier:issupplementto:10.1029* Searchterm:relatedIdentifier:*:10.1055*
  • 6.
  • 7.
  • 8. DataCite search Searchterm: * Searchterm: uploaded:[NOW-7DAY TO NOW] Searchterm: relatedIdentifier:* Searchterm: relatedIdentifier:issupplementto:10.1029* Searchterm:relatedIdentifier:*:10.1055*
  • 9.
  • 10. OAI and Statistics OAI Harvester http://oai.datacite.org DataCite statistics (resolution and registration) http://stats.datacite.org
  • 11.
  • 12.
  • 13. DataCite Content Service Service for displaying DataCite metadata Different formats (BibTeX, RIS, RDF, etc.) Content Negotation (through MIME-Typ) • Access through DOI proxy (http://dx.doi.org) • First implemented by CNRI and CrossRef: Documentation: http://www.crosscite.org/cn/
  • 14. Content negotiation Optimized for m2m communication using the accept header of the http protocol curl -L -H "Accept: MIME_TYPE" http://dx.doi.org/DOI Try a shortcut out in any webbrowser: http://data.datacite.org/MIME_TYPE/DOI http://data.crossref.org/DOI
  • 15. Resolving to the citation http://data.datacite.org/application/x-datacite+text/10.5524/10000 Li, j; Zhang, G; Lambert, D; Wang, J (2011): Genomic data from Emperor penguin. GigaScience. http://dx.doi.org/10.5524/100005
  • 16. Resolving to the RDF metadata http://data.datacite.org/application/rdf+xml/10.5524/100005 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:j.0="http://purl.org/dc/terms/" > <rdf:Description rdf:about="http://dx.doi.org/10.5524/100005"> <j.0:identifier>10.5524/100005</j.0:identifier> <j.0:creator>Li, J</j.0:creator> <j.0:creator>Zhang, G</j.0:creator> <j.0:creator>Wang, J</j.0:creator> <owl:sameAs>doi:10.5524/100005</owl:sameAs> <owl:sameAs>info:doi/10.5524/100005</owl:sameAs> <j.0:publisher>GigaScience</j.0:publisher> <j.0:creator>Lambert, D</j.0:creator> <j.0:date>2011</j.0:date> <j.0:title>Genomic data from the Emperor penguin (Aptenodytes forsteri)</j.0:title> </rdf:Description></rdf:RDF>
  • 17. Example of use This allows persistent identification of RDF statements! Implemented for all over 45 million CrossRef and DataCite DOI names Example of use: DOI Citation Formatter http://www.crosscite.org/citeproc/
  • 18.
  • 19.
  • 20. ODIN Project ORCID and DataCite Interoperability Network (http://odin-project.eu/ ) http://datacite.labs.orcid-eu.org/ Use your ORCID to claim your products from the DataCite store
  • 21.
  • 22. 2012: STM, CrossRef and DataCite Joint Statement 1. To improve the availability and findability of research data, the signers encourage authors of research papers to deposit researcher validated data in trustworthy and reliable Data Archives. 2. The Signers encourage Data Archives to enable bi- directional linking between datasets and publications by using established and community endorsed unique persistent identifiers such as database accession codes and DOI's. 3. The Signers encourage publishers and data archives to make visible or increase visibility of these links from publications to datasets and vice versa 22
  • 23. Example The dataset: Storz, D et al. (2009): Planktic foraminiferal flux and faunal composition of sediment trap L1_K276 in the northeastern Atlantic. http://dx.doi.org/10.1594/PANGAEA.724325 Is supplement to the article: Storz, David; Schulz, Hartmut; Waniek, Joanna J; Schulz-Bull, Detlef; Kucera, Michal (2009): Seasonal and interannual variability of the planktic foraminiferal flux in the vicinity of the Azores Current. Deep-Sea Research Part I-Oceanographic Research Papers, 56(1), 107-124, http://dx.doi.org/10.1016/j.dsr.2008.08.009
  • 24.
  • 25.