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RIC 2.0 Oscar NaimAlex Wade
RESEARCHER PRODUCTIVITY Make complex tasks simple
Data Deposit Data Management Research Information Centre Data Visualization Authoring Data Analysis Data Sharing
RIC 2.0 – The New Wave! Based on key ideas, conceptsand lessons learnedfrom RIC 1.0. Brand new code base built on top of SharePoint 2010 features. Re-usable building blocks strategy. Collection of experiences based on particular areas (e.g. Biology Workflow Experience, Federated Search Experience, etc). Available in multiple flavors (e.g. SODA, BPOS-S,  BPOS-D, On Site, Live@EDU). Light and composable. RIC 2.0 is a philosophyrather than an actual product.
Project Trident Research Information Centre Integrated Workflow Experience for the RIC Data Management
Project  Trident –  a Scientific Workflow Workbench Share workflows via Author, Execute and Monitor Workflows Compose and modify workflows via drag & drop  canvas View data products, performance metrics, and provenance data  Version 1.2 (Open Source under Apache 2.0 License): http://tridentworkflow.codeplex.com/
Biology Workflow Experience Trident Composer Trident Workflows SharePoint 2010 Trident Workflow Server
Integrated Workflow Experiencefor the Research Information Centre From the RIC, researchers can… ,[object Object]
Receive alerts (email, SMS) when workflows complete
Browse workflow execution history and provenance information
Review/store/manage data files that are written back into SharePoint by Trident,[object Object]
Project Trident Research Information Centre Word 2010  Authoring Include Data and Data artifacts in compound documents
Article Authoring Add-in for Word Read, convert,  and author NLM XML documents  Repository deposit via SWORD ORE Resource Map creation v.2 beta 3: http://research.microsoft.com/authoring/
Data Deposit Zentity Project Trident Research Information Centre Word 2010  SWORD client for SharePoint
Zentity – a Research Output Repository Platform Native support for RSS, OAI-PMH, OAI-ORE, AtomPub and SWORD A semantic computing platform to store and expose relationships between digital assets Flexible data model enables many scenarios and can be easily extended over time   v.1 (v.2 Tech Preview available soon!) : http://research.microsoft.com/zentity/
SWORD client for SharePoint send to  object
Archive this file in Repository X
SWORD client forSharePoint From SharePoint (and the RIC), researchers can… ,[object Object],Document Presentation Image Data files and publish it to any repository (via SWORD) ,[object Object],[object Object]
Zentity Project Trident Research Information Centre Word 2010  Excel 2010 Data Analysis through Excel 2010
Metagenomics Using Azure cloud to host standard sequence data Run BLAST in parallel “map reduce” style for a large collection input Use Excel-based tool to search databases. selects DBs and input sequence ,[object Object]
45x with 50 roles; 94x with 100 roles;
with 300 roles computation time is reduced to 4 hours !Web Role Input Splitter Worker Role BLAST Execution Worker  Role #n BLAST Execution Worker  Role #1 …. Azure Blob Storage BLAST DB Configuration Genome DB 1 Genome DB K Combiner Worker Role
Zentity Project Trident Research Information Centre Word 2010  Data Sharing  OData Protocol Excel 2010 OData
A RESTful Interface for Data http://www.odata.org
URL Conventions Addressing lists and items Presentation options http://www.odata.org
OData Producers SharePoint 2010 IBM Websphere Windows Azure Table Storage & SQL Azure Zentity 2.0 Services: Facebook Insights Netflix Open Government Data Initiative Open Science Data Initiative DBPedia OData Consumers Web Browsers Excel 2010 LinQPad Client libraries for Javascript PHP Java  Windows 7 Phone iPhone (Objective C) .NET http://www.odata.org

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Ric 2.0 bl workshop 2010

  • 1. RIC 2.0 Oscar NaimAlex Wade
  • 2. RESEARCHER PRODUCTIVITY Make complex tasks simple
  • 3. Data Deposit Data Management Research Information Centre Data Visualization Authoring Data Analysis Data Sharing
  • 4. RIC 2.0 – The New Wave! Based on key ideas, conceptsand lessons learnedfrom RIC 1.0. Brand new code base built on top of SharePoint 2010 features. Re-usable building blocks strategy. Collection of experiences based on particular areas (e.g. Biology Workflow Experience, Federated Search Experience, etc). Available in multiple flavors (e.g. SODA, BPOS-S, BPOS-D, On Site, Live@EDU). Light and composable. RIC 2.0 is a philosophyrather than an actual product.
  • 5. Project Trident Research Information Centre Integrated Workflow Experience for the RIC Data Management
  • 6. Project Trident – a Scientific Workflow Workbench Share workflows via Author, Execute and Monitor Workflows Compose and modify workflows via drag & drop canvas View data products, performance metrics, and provenance data Version 1.2 (Open Source under Apache 2.0 License): http://tridentworkflow.codeplex.com/
  • 7. Biology Workflow Experience Trident Composer Trident Workflows SharePoint 2010 Trident Workflow Server
  • 8.
  • 9.
  • 10.
  • 11.
  • 12. Receive alerts (email, SMS) when workflows complete
  • 13. Browse workflow execution history and provenance information
  • 14.
  • 15. Project Trident Research Information Centre Word 2010 Authoring Include Data and Data artifacts in compound documents
  • 16. Article Authoring Add-in for Word Read, convert, and author NLM XML documents Repository deposit via SWORD ORE Resource Map creation v.2 beta 3: http://research.microsoft.com/authoring/
  • 17. Data Deposit Zentity Project Trident Research Information Centre Word 2010 SWORD client for SharePoint
  • 18. Zentity – a Research Output Repository Platform Native support for RSS, OAI-PMH, OAI-ORE, AtomPub and SWORD A semantic computing platform to store and expose relationships between digital assets Flexible data model enables many scenarios and can be easily extended over time v.1 (v.2 Tech Preview available soon!) : http://research.microsoft.com/zentity/
  • 19. SWORD client for SharePoint send to object
  • 20. Archive this file in Repository X
  • 21.
  • 22. Zentity Project Trident Research Information Centre Word 2010 Excel 2010 Data Analysis through Excel 2010
  • 23.
  • 24. 45x with 50 roles; 94x with 100 roles;
  • 25. with 300 roles computation time is reduced to 4 hours !Web Role Input Splitter Worker Role BLAST Execution Worker Role #n BLAST Execution Worker Role #1 …. Azure Blob Storage BLAST DB Configuration Genome DB 1 Genome DB K Combiner Worker Role
  • 26. Zentity Project Trident Research Information Centre Word 2010 Data Sharing OData Protocol Excel 2010 OData
  • 27. A RESTful Interface for Data http://www.odata.org
  • 28. URL Conventions Addressing lists and items Presentation options http://www.odata.org
  • 29. OData Producers SharePoint 2010 IBM Websphere Windows Azure Table Storage & SQL Azure Zentity 2.0 Services: Facebook Insights Netflix Open Government Data Initiative Open Science Data Initiative DBPedia OData Consumers Web Browsers Excel 2010 LinQPad Client libraries for Javascript PHP Java Windows 7 Phone iPhone (Objective C) .NET http://www.odata.org
  • 30. RIC 2.0 demo Excel Power Pivot
  • 31. Zentity Project Trident Research Information Centre Visualizing Data Pivot Word 2010 Excel 2010 OData
  • 34. Federated Search Experience HTML to XML convertor Open Search OAI-PMH OCLC OData source Extensibility for custom adapters
  • 35. Moving Forward Gallery of experiences Web-parts community Parallel development RIC in the cloud (BPOS)
  • 36. Questions? Oscar Naim Senior Research Program Manager Microsoft External Research onaim@microsoft.com http://research.microsoft.com/people/onaim URL – http://www.microsoft.com/scholarlycomm/ Facebook: Scholarly Communication at Microsoft