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Functional Magnetic Resonance Imaging
Sources ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
[object Object],[object Object],[object Object],[object Object],[object Object]
fMRI technology is based on … ,[object Object],[object Object],[object Object]
The Physics of NMR Bloch (1946) and Hahn (1950) ,[object Object],[object Object],[object Object],= electron     = neutron     = proton
[object Object],[object Object],The Physics of NMR Bloch (1946) and Hahn (1950)
[object Object],[object Object],The Physics of NMR Bloch (1946) and Hahn (1950) proportionality constant for  specific nuclear species (MHz/Tesla)  strength of static magnetic field  (typically about 1.5 Tesla) Nuclei  Unpaired Protons  Unpaired Neutrons  Net Spin         MHz/T  1 H  1  0  1/2  42.58  2 H  1  1  1  6.54  31 P   0  1  1/2  17.25  23 Na   2  1  3/2  11.27  14 N   1  1  1  3.08  13 C  0  1  1/2  10.71  19 F  0  1  1/2  40.08
[object Object],The Physics of NMR Bloch (1946) and Hahn (1950) The precessing magnetization can be measured by a nearby coil.
[object Object],[object Object],[object Object],[object Object],[object Object],The Physics of NMR Bloch (1946) and Hahn (1950)
How does fMRI form an image of neural activity? How to form an image of neural activity using NMR?  Need to measure: 1. Spatial Location 2. Neural Activity Magnitude
Spatial Location in 1-D ,[object Object],[object Object],[object Object],“ base” strength  of the static  magnetic field gradient strength  of the static magnetic static field strength location in 1-D ,[object Object],[object Object]
[object Object],[object Object],Spatial Location in 1-D F  [ s(t) ] measure  s(t) frequency amplitude intensity
Spatial Location in 1-D Frequency Encoding in practice Phase Encoding
Spatial Location in 2-D Echo Planar Imaging  (Mansfield 1977): use frequency encoding to  determine the “ x”  direction and echo encoding to determine the “ y ”  direction. sampling windows
[object Object],Spatial Location in 3-D
How to measure neural activity? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Blood oxygen level dependent contrast (BOLD) (Ogawa et al. 1990) ,[object Object],[object Object],During periods of neuronal activity, local blood flow and volume increase with little or no  change in oxygen consumption.  As a consequence, the oxygen content of the venous blood is elevated, resulting in an increase in the MR signal.
Experimental Procedure …
 
 
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],so fMRI works like this …
Issues! There is not a one-to-one correspondence between  T2  and the neural activity that we are trying to measure.  There are pathways that might decrease the decay rate and hence results in a decreased MR signal!
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Issues!
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Dealing with the issues!
This figure relates the temporal and spatial resolution of methods for the study of brain function to the size scale of neuronal features and to the “invasiveness” of the methods. Comparison: temporal and spatial resolution; and invasiveness
How fMRI stacks up: ,[object Object],[object Object],[object Object],[object Object],[object Object]

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F mri

  • 2.
  • 3.
  • 4.
  • 5.
  • 6.
  • 7.
  • 8.
  • 9.
  • 10. How does fMRI form an image of neural activity? How to form an image of neural activity using NMR? Need to measure: 1. Spatial Location 2. Neural Activity Magnitude
  • 11.
  • 12.
  • 13. Spatial Location in 1-D Frequency Encoding in practice Phase Encoding
  • 14. Spatial Location in 2-D Echo Planar Imaging (Mansfield 1977): use frequency encoding to determine the “ x” direction and echo encoding to determine the “ y ” direction. sampling windows
  • 15.
  • 16.
  • 17.
  • 19.  
  • 20.  
  • 21.
  • 22. Issues! There is not a one-to-one correspondence between T2 and the neural activity that we are trying to measure. There are pathways that might decrease the decay rate and hence results in a decreased MR signal!
  • 23.
  • 24.
  • 25. This figure relates the temporal and spatial resolution of methods for the study of brain function to the size scale of neuronal features and to the “invasiveness” of the methods. Comparison: temporal and spatial resolution; and invasiveness
  • 26.

Notas del editor

  1. NMR- see p1 Noll; hydrogen - p 1 Noll susceptibility - p2 Cohen
  2. 1 - p1 Noll 2 - p2 Cohen 3 - p2 Cohen and p1 Noll
  3. 2 - p2 Cohen
  4. 1 - p2 Noll, Hornak table - Hornak
  5. p2 Noll in phase - p3 Cohen
  6. p 4 Cohen p3-4 Noll
  7. p5 Noll p5 Cohen
  8. p6 Noll
  9. p7 Noll, p5-6 Cohen
  10. p9 Noll, p12 Cohen rapid data acquisition techniques special reception coils, increasing static magnetic field intensity SNR depends on temporal resolution - lower temporal resolution head - head restraints, bite bars, post-processing techniques, different gradient systems, multi-shot techniques, movement correction algorithms, use cortical landmarks
  11. p13 Cohen: mapping cortical and subcortical function will require methods with an appropriate balance of temporal and spatial resolution.
  12. invasiveness ==> it is possible to perform longitudinal studies