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A new way to Drug Discovery
The 3D-Screen technology
       A new way to Drug Discovery


    > Biological products exert their function through a specific tri-dimensional conformation that controls
    their interactions with cellular partners

                                               Known
                                               Ligand




                                                                                                 TARGET
                              TARGET
                                                                                                 PROTEIN
                                                                                                                    Biological
                              PROTEIN
                                                                                                                    Response

                                                                                Dramatic or subtle conformational
                                                                                changes




                                                                                                                                 ®
2       March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
The 3D-Screen technology
         Basic Principle

                  ON                                                              OFF
     Native conformation of the
    target is recognize by the 3D-
                Sensor
                                                                                    TARGET
                                                                                    PROTEIN   Identification in a single
                                                                                              assay of:
                                               COMPOUND
                        TARGET                 LIBRARY                                        -Agonist
                        PROTEIN                                                               -Antagonist
                                                                                              - Allosteric Modulator
                                                                                              (Inhibitor & Activator)
                                                                                              - Cellular cofactor
                                                                                    TARGET    modulator
                                                                                    PROTEIN




                                                Screening for CONFORMATION changes


                                                                                                                           ®
3         March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
3D-SCREENTM Technology
             Molecular principle & Opportunities offered




                                                                                                                              COMPOUND
                                                                    AD                                                         LIBRARY

                                                                     Peptide-sensor
                                      CELLULAR
                                      COFACTOR
                                                   HCV
                                     CELLULAR
                                     COFACTOR
                                                 TARGET
                                        CELLULAR
                                        COFACTOR

                                                                                                                  HUMAN CELL
                                                 DBD
                    5’                                            Luciferase                            3’
                                                 UAS

                                                                                      DISCOVERY OF THE BROAD RANGE OF DRUGS
                                                                                      - Agonists (DAA)
AD: Activating Domain                                                                 - Antagonists (DAA)
DBD: DNA Binding Domain
UAS: upstream Activating Sequence
                                                                                      - Allosteric Modulators (DAA)
                                                                                      - Disruption of protein interactions (HTA)
                                                                                      - Modulators of cellular cofactors (HTA)       ®
4             March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
3D-SCREENTM Technology
             Molecular principle & Opportunities offered




                                                                                                                              COMPOUND
                                                                                                                               LIBRARY
                               CELLULAR
                                                                                      AD
                              COFACTOR

                                                                                      Peptide-sensor
                                                   HCV
                        CELLULAR
                                                 TARGET
                       COFACTOR



                                 CELLULAR
                                COFACTOR
                                                                                                                  HUMAN CELL
                                                 DBD
                    5’                                            Luciferase                            3’
                                                 UAS
                                                               X                      DISCOVERY OF THE BROAD RANGE OF DRUGS
                                                                                      - Agonists (DAA)
AD: Activating Domain                                                                 - Antagonists (DAA)
DBD: DNA Binding Domain
UAS: upstream Activating Sequence
                                                                                      - Allosteric Modulators (DAA)
                                                                                      - Disruption of protein interactions (HTA)
                                                                                      - Modulators of cellular cofactors (HTA)       ®
5             March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
3D-Sensor: The Heart of 3D-Screen technology
      A powerful cell-based assay to discover allosteric & cellular cofactor
      modulators of HCV NS5B polymerase IN ONE SINGLE ASSAY




                                                                               ®
6      March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
3D-Sensor: The Heart of 3D-Screen technology
      A powerful cell-based assay to discover allosteric & cellular cofactor
      modulators of HCV NS3 protein IN ONE SINGLE ASSAY


                                       ORTHOSTERIC MODULATORS                    ORIGINAL MODULATORS

                               Peptidomimetic anti-protease inhibitors           Small molecule (< 500 D)

                                Linear                            Macrocyclic    CVVS-060215 (VIVALIS)
                             (e.g VX950)                        (e.g BILN2061)      (EC50 =13 nM)

                                   +                                    +                   +


                      VIVALIS SMALL MOLECULE UNDER LEAD OPTIMIZATION
                      WHICH IS NOT A PEPTIDOMIMETIC OR A MACROCYCLIC MOLECULE
                      UNLIKE MOST COMPETITOR MOLECULES




                                                                                                            ®
7      March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
3D-Sensor: The Heart of 3D-Screen technology
        A powerful cell-based assay to discover any modulators’ class of
        Estrogen Receptor alpha ACCORDING SCREENING SPECIFICATIONS
    CONFORMATION SENSITIVE PEPTIDES CAN BE IDENTIFIED THAT ARE SENSITIVE
                    TO AGONISTS, ANTAGONISTS OR BOTH

        NO                  E2             4OHT                  9cRA             DEX
      LIGAND               agonist         antagonist            RA ligand       GR ligand 1
                            10nM             50µM                 0.5µM              µM


                                                                                               Selected peptide sensitives to
                                                                                               all types of ligands


                                                                                               Selected peptides sensitive to
                                                                                               antagonist ligands only

                                                                                               Selected peptide sensitives to
                                                                                               agonist ligands only

      SELECTION OF THE 3D-SENSOR CANDIDATE ACCORDING TO THE INTENTED
                           SCREENING OBJECTIVES
                                                                                                                                ®
8        March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
3D-Sensor: The Heart of 3D-Screen technology
             A powerful cell-based assay with a VERY HIGH SENSITIVITY
           3D-Sensor sensitive to conformational changes of Retinoic Acid Receptor (RAR) induced by the
           binding of all-trans-RA only or 9-cis-RA & all-trans-RA in Yeast cells
                            Inhibition by 9-cis-RA & all-trans-RA                     Inhibition by all-trans-RA only




RA : RETINOIC ACID                                                   9-cis-RA                              All-rans-RA




         Selective identification of 3D-Sensor sensing subtle differences in conformational
                changes induced by the structurally close at-RA and 9cis-RA ligands
                                                                                                                         ®
9             March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
The 3D-SCREENTM Technology
         An innovative platform for new classes of drugs



     1. A unique proprietary human cell-based, target-oriented, HTS-compatible
        assay to screen for small molecules that specifically alter the 3D structure of a
        target protein in their natural cellular environment.
     2. A powerful platform to discover orthosteric, allosteric & cellular cofactor
        modulators IN ONE SINGLE ASSAY, including molecules that cannot be
        identifed using tradional cell-based assays
     3. Validated with well established therapeutic targets (Hepatitis C, Nuclear Receptors)
     4. Applicable to any validated therapeutic target (viral proteins, nuclear receptors, kinases, …)

        A novel drug discovery platform that has the potential to produce clinically
                 differentiated products across multiple therapeutic areas

                                                                                                    ®
10         March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
®



           Merci
       Thank You
ありがとうございました

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3D-Screen Technology overview

  • 1. A new way to Drug Discovery
  • 2. The 3D-Screen technology A new way to Drug Discovery > Biological products exert their function through a specific tri-dimensional conformation that controls their interactions with cellular partners Known Ligand TARGET TARGET PROTEIN Biological PROTEIN Response Dramatic or subtle conformational changes ® 2 March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
  • 3. The 3D-Screen technology Basic Principle ON OFF Native conformation of the target is recognize by the 3D- Sensor TARGET PROTEIN Identification in a single assay of: COMPOUND TARGET LIBRARY -Agonist PROTEIN -Antagonist - Allosteric Modulator (Inhibitor & Activator) - Cellular cofactor TARGET modulator PROTEIN Screening for CONFORMATION changes ® 3 March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
  • 4. 3D-SCREENTM Technology Molecular principle & Opportunities offered COMPOUND AD LIBRARY Peptide-sensor CELLULAR COFACTOR HCV CELLULAR COFACTOR TARGET CELLULAR COFACTOR HUMAN CELL DBD 5’ Luciferase 3’ UAS DISCOVERY OF THE BROAD RANGE OF DRUGS - Agonists (DAA) AD: Activating Domain - Antagonists (DAA) DBD: DNA Binding Domain UAS: upstream Activating Sequence - Allosteric Modulators (DAA) - Disruption of protein interactions (HTA) - Modulators of cellular cofactors (HTA) ® 4 March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
  • 5. 3D-SCREENTM Technology Molecular principle & Opportunities offered COMPOUND LIBRARY CELLULAR AD COFACTOR Peptide-sensor HCV CELLULAR TARGET COFACTOR CELLULAR COFACTOR HUMAN CELL DBD 5’ Luciferase 3’ UAS X DISCOVERY OF THE BROAD RANGE OF DRUGS - Agonists (DAA) AD: Activating Domain - Antagonists (DAA) DBD: DNA Binding Domain UAS: upstream Activating Sequence - Allosteric Modulators (DAA) - Disruption of protein interactions (HTA) - Modulators of cellular cofactors (HTA) ® 5 March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
  • 6. 3D-Sensor: The Heart of 3D-Screen technology A powerful cell-based assay to discover allosteric & cellular cofactor modulators of HCV NS5B polymerase IN ONE SINGLE ASSAY ® 6 March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
  • 7. 3D-Sensor: The Heart of 3D-Screen technology A powerful cell-based assay to discover allosteric & cellular cofactor modulators of HCV NS3 protein IN ONE SINGLE ASSAY ORTHOSTERIC MODULATORS ORIGINAL MODULATORS Peptidomimetic anti-protease inhibitors Small molecule (< 500 D) Linear Macrocyclic CVVS-060215 (VIVALIS) (e.g VX950) (e.g BILN2061) (EC50 =13 nM) + + + VIVALIS SMALL MOLECULE UNDER LEAD OPTIMIZATION WHICH IS NOT A PEPTIDOMIMETIC OR A MACROCYCLIC MOLECULE UNLIKE MOST COMPETITOR MOLECULES ® 7 March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
  • 8. 3D-Sensor: The Heart of 3D-Screen technology A powerful cell-based assay to discover any modulators’ class of Estrogen Receptor alpha ACCORDING SCREENING SPECIFICATIONS CONFORMATION SENSITIVE PEPTIDES CAN BE IDENTIFIED THAT ARE SENSITIVE TO AGONISTS, ANTAGONISTS OR BOTH NO E2 4OHT 9cRA DEX LIGAND agonist antagonist RA ligand GR ligand 1 10nM 50µM 0.5µM µM Selected peptide sensitives to all types of ligands Selected peptides sensitive to antagonist ligands only Selected peptide sensitives to agonist ligands only SELECTION OF THE 3D-SENSOR CANDIDATE ACCORDING TO THE INTENTED SCREENING OBJECTIVES ® 8 March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
  • 9. 3D-Sensor: The Heart of 3D-Screen technology A powerful cell-based assay with a VERY HIGH SENSITIVITY 3D-Sensor sensitive to conformational changes of Retinoic Acid Receptor (RAR) induced by the binding of all-trans-RA only or 9-cis-RA & all-trans-RA in Yeast cells Inhibition by 9-cis-RA & all-trans-RA Inhibition by all-trans-RA only RA : RETINOIC ACID 9-cis-RA All-rans-RA Selective identification of 3D-Sensor sensing subtle differences in conformational changes induced by the structurally close at-RA and 9cis-RA ligands ® 9 March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
  • 10. The 3D-SCREENTM Technology An innovative platform for new classes of drugs 1. A unique proprietary human cell-based, target-oriented, HTS-compatible assay to screen for small molecules that specifically alter the 3D structure of a target protein in their natural cellular environment. 2. A powerful platform to discover orthosteric, allosteric & cellular cofactor modulators IN ONE SINGLE ASSAY, including molecules that cannot be identifed using tradional cell-based assays 3. Validated with well established therapeutic targets (Hepatitis C, Nuclear Receptors) 4. Applicable to any validated therapeutic target (viral proteins, nuclear receptors, kinases, …) A novel drug discovery platform that has the potential to produce clinically differentiated products across multiple therapeutic areas ® 10 March 26, 2012© 2000-2011 Vivalis — All rights reserved— CONFIDENTIAL
  • 11. ® Merci Thank You ありがとうございました