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Polyacrylamide Gel
Electrophoresis
BY
S.SRIVIDHYA
Electrophoresis
 Electrophoresis is a separation technique that
is based on the movement of charged particles
in an electric field
 The term electrophoresis was coined from a
greek work “Phoresis” which means “Being
carried away”
 Hence literal meaning of the word
electrophoresis means “to carry with
electricity.”
PAGE Introduction
 an analytical method used to separate
components of a protein mixture based on
size.
 Principle : A charged molecule will migrate in
an electric field towards an electrode with
opposite sign.
Native PAGE
Separation is based upon charge,size
and shape of macromolecules.
Useful for separation and purification
of mixture of proteins
This was the original mode of
electrophorosis
POLYMERISATION
Initiated by free radical catalysis
Polymerisation of acrylamide monomer and
bisacrylamide comonomer
Head to tail fashion
Fairly well defined structure
 Polyacrylamide gels are characterized by two
parameters: total monomer concentration (%T,
in g/100 ml) and weight percentage of cross
linker (%C).
 %T -the relative pore size of the resulting
polyacrylamide gel
 higher %T - smaller pores.
 The practical ranges for monomer
concentration are stock solutions of 30-40%
Advantages
 Estimation of molecular weight of proteins and
nucleic acids
 Determination of subunit structure of proteins
 Purification of isolated proteins
 Monitoring changes of protein content in
body fluids
Polyacrylamide gel electrophoresis

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Polyacrylamide gel electrophoresis

  • 2. Electrophoresis  Electrophoresis is a separation technique that is based on the movement of charged particles in an electric field  The term electrophoresis was coined from a greek work “Phoresis” which means “Being carried away”  Hence literal meaning of the word electrophoresis means “to carry with electricity.”
  • 3. PAGE Introduction  an analytical method used to separate components of a protein mixture based on size.  Principle : A charged molecule will migrate in an electric field towards an electrode with opposite sign.
  • 4.
  • 5. Native PAGE Separation is based upon charge,size and shape of macromolecules. Useful for separation and purification of mixture of proteins This was the original mode of electrophorosis
  • 6. POLYMERISATION Initiated by free radical catalysis Polymerisation of acrylamide monomer and bisacrylamide comonomer Head to tail fashion Fairly well defined structure
  • 7.
  • 8.  Polyacrylamide gels are characterized by two parameters: total monomer concentration (%T, in g/100 ml) and weight percentage of cross linker (%C).  %T -the relative pore size of the resulting polyacrylamide gel  higher %T - smaller pores.  The practical ranges for monomer concentration are stock solutions of 30-40%
  • 9. Advantages  Estimation of molecular weight of proteins and nucleic acids  Determination of subunit structure of proteins  Purification of isolated proteins  Monitoring changes of protein content in body fluids